Epirubicin (hydrochloride)_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.231654
RPS6 ribosomal protein S6 0.0820195
AXL AXL receptor tyrosine kinase 0.0724092
RNF213 ring finger protein 213 0.0711058
FTH1 ferritin, heavy polypeptide 1 0.0682967
FLNA filamin A, alpha 0.0680119
CA12 carbonic anhydrase XII 0.0639168
RPS2 ribosomal protein S2 0.0611984
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0602266
IGFBP3 insulin-like growth factor binding protein 3 0.0529132
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0522625
ANXA4 annexin A4 0.0505237
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0467791
RPS19 ribosomal protein S19 0.0463024
RPL4 ribosomal protein L4 0.0458587
TPI1 triosephosphate isomerase 1 0.0441684
RIN2 Ras and Rab interactor 2 0.0432657
PCBP2 poly(rC) binding protein 2 0.0427839
NDRG1 N-myc downstream regulated 1 0.0419741
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.040807
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0386503
SRRM2 serine/arginine repetitive matrix 2 0.038485
CSNK1G1 casein kinase 1, gamma 1 0.0375733
AUTS2 autism susceptibility candidate 2 0.0368139
RRM2B ribonucleotide reductase M2 B (TP53 inducible) 0.0365574
EGFR epidermal growth factor receptor 0.0365455
PRKCA protein kinase C, alpha 0.03653
ZMYND8 zinc finger, MYND-type containing 8 0.0362184
FBXO22 F-box protein 22 0.0355325
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 0.0352436
RPS12 ribosomal protein S12 0.0346004
EEF2 eukaryotic translation elongation factor 2 0.0345821
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 0.0342735
H1-0 H1.0 linker histone 0.0342373
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0338611
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0338476
ESYT2 extended synaptotagmin-like protein 2 0.0337806
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0333
HSPA8 heat shock 70kDa protein 8 0.0328442
IGFBP4 insulin-like growth factor binding protein 4 0.0326306
RPS17 ribosomal protein S17 0.0321243
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0303359
MCL1 myeloid cell leukemia 1 0.0300779
NXN nucleoredoxin 0.0298337
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.029624
AHNAK AHNAK nucleoprotein 0.0284394
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0284272
MACF1 microtubule-actin crosslinking factor 1 0.0284131
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0271794
PRRC2C proline-rich coiled-coil 2C 0.0269131
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.0268336
DSPP dentin sialophosphoprotein 0.0265465
NFE2L1 nuclear factor, erythroid 2-like 1 0.0262225
COL7A1 collagen, type VII, alpha 1 0.0261791
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0261681
PTMA prothymosin, alpha 0.0260817
YBX3 Y box binding protein 3 0.0260212
ABTB3 ankyrin repeat and BTB domain containing 3 0.0260203
PGAM4 phosphoglycerate mutase family member 4 0.0258643
MORC4 MORC family CW-type zinc finger 4 0.0252678
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0249718
POLH polymerase (DNA directed), eta 0.0249339
HDGF hepatoma-derived growth factor 0.0249277
RPS3 ribosomal protein S3 0.0247132
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0243787
IGFBP1 insulin-like growth factor binding protein 1 0.0243415
SULF2 sulfatase 2 0.02403
PNN pinin, desmosome associated protein 0.0238899
NTN1 netrin 1 0.023742
SRPK2 SRSF protein kinase 2 0.0235266
TNS1 tensin 1 0.0234339
NHSL1 NHS-like 1 0.023415
PKM pyruvate kinase, muscle 0.0233344
PLAU plasminogen activator, urokinase 0.0231339
GK glycerol kinase 0.0230338
MAST4 microtubule associated serine/threonine kinase family member 4 0.0228511
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0224833
XPC xeroderma pigmentosum, complementation group C 0.0223741
GSE1 Gse1 coiled-coil protein 0.0223258
TRAPPC9 trafficking protein particle complex 9 0.0222897
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0222774
CCNL1 cyclin L1 0.0219595
MLEC malectin 0.0219196
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0219069
ABR active BCR-related 0.021766
TIGAR TP53 induced glycolysis regulatory phosphatase 0.0217332
NCOR2 nuclear receptor corepressor 2 0.0216816
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0216552
ZFHX3 zinc finger homeobox 3 0.0212078
HSDL2 hydroxysteroid dehydrogenase like 2 0.0210351
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0208594
CAPN2 calpain 2, (m/II) large subunit 0.020796
VEGFA vascular endothelial growth factor A 0.0205503
PLD5 phospholipase D family, member 5 0.0205276
CD46 CD46 molecule, complement regulatory protein 0.0204146
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0203363
DSTN destrin (actin depolymerizing factor) 0.0202898
TNIP1 TNFAIP3 interacting protein 1 0.0202119
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) 0.0201152
RPL28 ribosomal protein L28 0.0200853

decreased expression

Symbol Name Standardized Value
ARHGAP26 Rho GTPase activating protein 26 -0.143083
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.128823
KYNU kynureninase -0.127492
ANXA2 annexin A2 -0.124674
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.120025
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.102323
FNDC3B fibronectin type III domain containing 3B -0.0933435
PDE10A phosphodiesterase 10A -0.0908476
AKAP12 A kinase (PRKA) anchor protein 12 -0.0871317
KCTD9 potassium channel tetramerization domain containing 9 -0.0821984
PDE4D phosphodiesterase 4D, cAMP-specific -0.0776259
OSMR oncostatin M receptor -0.0755398
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0727108
ACTG1 actin gamma 1 -0.071629
BMAL2 basic helix-loop-helix ARNT like 2 -0.0674687
NCOA7 nuclear receptor coactivator 7 -0.0653868
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.065154
SPAG9 sperm associated antigen 9 -0.0632503
BIRC3 baculoviral IAP repeat containing 3 -0.0628914
BIRC6 baculoviral IAP repeat containing 6 -0.0621916
TRIO trio Rho guanine nucleotide exchange factor -0.0619131
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0613265
TM4SF1 transmembrane 4 L six family member 1 -0.0588829
RPLP1 ribosomal protein, large, P1 -0.058475
ECT2 epithelial cell transforming 2 -0.058277
FMNL2 formin-like 2 -0.0565493
VCL vinculin -0.0561686
MT1X metallothionein 1X -0.0556178
FTL ferritin, light polypeptide -0.0550233
VEZT vezatin, adherens junctions transmembrane protein -0.0547149
TXNRD1 thioredoxin reductase 1 -0.0542945
MORF4L2 mortality factor 4 like 2 -0.0531889
ARHGAP5 Rho GTPase activating protein 5 -0.0518147
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0511464
USP34 ubiquitin specific peptidase 34 -0.0498727
ACTN4 actinin, alpha 4 -0.0496363
RASA2 RAS p21 protein activator 2 -0.0484262
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0482108
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0478959
NRIP1 nuclear receptor interacting protein 1 -0.0476505
PGK1 phosphoglycerate kinase 1 -0.047125
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0460574
USP3 ubiquitin specific peptidase 3 -0.045883
KDM3A lysine (K)-specific demethylase 3A -0.0458622
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0458615
SP100 SP100 nuclear antigen -0.0452846
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0452578
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0433359
SMAD3 SMAD family member 3 -0.0430071
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0424006
C15ORF48 chromosome 15 open reading frame 48 -0.0418902
UBC ubiquitin C -0.041819
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0417066
USP9X ubiquitin specific peptidase 9, X-linked -0.0413973
NF1 neurofibromin 1 -0.0410283
RPS24 ribosomal protein S24 -0.0406171
ANXA1 annexin A1 -0.0403901
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0401395
JMJD1C jumonji domain containing 1C -0.03976
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0386451
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0385607
GLIS3 GLIS family zinc finger 3 -0.0385291
DGKD diacylglycerol kinase, delta 130kDa -0.038264
ELL2 elongation factor, RNA polymerase II, 2 -0.0380064
NAV2 neuron navigator 2 -0.0373739
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0362752
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0360686
RB1CC1 RB1-inducible coiled-coil 1 -0.0359138
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0356718
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0351197
LDHA lactate dehydrogenase A -0.0351102
KPNB1 karyopherin (importin) beta 1 -0.0350067
RAD21 RAD21 homolog (S. pombe) -0.034691
COPB1 coatomer protein complex, subunit beta 1 -0.0346475
CLINT1 clathrin interactor 1 -0.0345845
GOLGA4 golgin A4 -0.0344873
KIRREL3 kin of IRRE like 3 (Drosophila) -0.0343792
WDR45B WD repeat domain 45B -0.0342788
RAB10 RAB10, member RAS oncogene family -0.0339972
EXT1 exostosin glycosyltransferase 1 -0.0335776
RNF145 ring finger protein 145 -0.0331862
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0327434
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.032698
CLTC clathrin, heavy chain (Hc) -0.0326672
AKAP13 A kinase (PRKA) anchor protein 13 -0.0325054
KLF6 Kruppel-like factor 6 -0.0323637
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0323256
LMAN1 lectin, mannose-binding, 1 -0.032174
AGFG1 ArfGAP with FG repeats 1 -0.0313353
BTG1 B-cell translocation gene 1, anti-proliferative -0.0310664
FBXL2 F-box and leucine-rich repeat protein 2 -0.031036
RPL23 ribosomal protein L23 -0.0308584
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0301149
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0300817
DOCK4 dedicator of cytokinesis 4 -0.030043
MT2A metallothionein 2A -0.029917
USP47 ubiquitin specific peptidase 47 -0.029418
UBA2 ubiquitin-like modifier activating enzyme 2 -0.0294132
PDLIM5 PDZ and LIM domain 5 -0.0292787
COG5 component of oligomeric golgi complex 5 -0.0290777