Epirubicin (hydrochloride)_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERBB2 erb-b2 receptor tyrosine kinase 2 0.101668
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0778408
VMP1 vacuole membrane protein 1 0.0549028
ELOVL5 ELOVL fatty acid elongase 5 0.0492523
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0418403
KAZN kazrin, periplakin interacting protein 0.0389946
FBXL20 F-box and leucine-rich repeat protein 20 0.0387466
HSPA8 heat shock 70kDa protein 8 0.0375517
TRAPPC9 trafficking protein particle complex 9 0.0311378
NCOA3 nuclear receptor coactivator 3 0.0311331
TENM2 teneurin transmembrane protein 2 0.0306054
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0300925
CCNL1 cyclin L1 0.0293984
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0278871
SMAD3 SMAD family member 3 0.0263787
WWOX WW domain containing oxidoreductase 0.0259379
NAMPT nicotinamide phosphoribosyltransferase 0.0253376
LGALS12 lectin, galactoside-binding, soluble, 12 0.0252685
MSI2 musashi RNA-binding protein 2 0.0250956
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0246019
BCAS3 breast carcinoma amplified sequence 3 0.0241148
PARD3B par-3 family cell polarity regulator beta 0.0240651
EXT1 exostosin glycosyltransferase 1 0.023158
MED13L mediator complex subunit 13-like 0.0229876
LRP1B low density lipoprotein receptor-related protein 1B 0.0222018
GSE1 Gse1 coiled-coil protein 0.0219129
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.021679
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0215324
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0215117
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0211826
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0210836
TIGAR TP53 induced glycolysis regulatory phosphatase 0.0207389
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0205247
FOXN3 forkhead box N3 0.0200767
DENND1A DENN/MADD domain containing 1A 0.0200419
FNDC3B fibronectin type III domain containing 3B 0.0197009
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0195101
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0195029
UNC13B unc-13 homolog B (C. elegans) 0.018782
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0181454
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0179004
SUSD6 sushi domain containing 6 0.0178446
MYO10 myosin X 0.0177599
TMEM178B transmembrane protein 178B 0.0177275
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.01769
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 0.0176356
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0172949
EXOC4 exocyst complex component 4 0.0172617
RPS2 ribosomal protein S2 0.0171685
NCOA7 nuclear receptor coactivator 7 0.0168264
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0167418
WWC1 WW and C2 domain containing 1 0.0167198
CTNND2 catenin (cadherin-associated protein), delta 2 0.0167047
ICAM1 intercellular adhesion molecule 1 0.0166432
FAM168A family with sequence similarity 168, member A 0.0166115
SLC22A23 solute carrier family 22, member 23 0.0165038
PCGF2 polycomb group ring finger 2 0.0165006
GPHN gephyrin 0.0163769
GPC6 glypican 6 0.0162394
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0161704
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0158873
EMSY EMSY transcriptional repressor, BRCA2 interacting 0.0156126
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0154941
AUTS2 autism susceptibility candidate 2 0.0153921
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0153133
YPEL2 yippee-like 2 (Drosophila) 0.015215
CUX1 cut-like homeobox 1 0.014869
MACROD1 MACRO domain containing 1 0.0148651
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0148525
TBC1D5 TBC1 domain family, member 5 0.014793
FBXO32 F-box protein 32 0.0146827
OLA1 Obg-like ATPase 1 0.0146633
AGFG1 ArfGAP with FG repeats 1 0.0146589
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0145684
TOP1 topoisomerase (DNA) I 0.014491
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0144149
PGR progesterone receptor 0.0143364
PRLR prolactin receptor 0.0143314
SRPK2 SRSF protein kinase 2 0.0142316
PTPRG protein tyrosine phosphatase, receptor type, G 0.0142065
PBX1 pre-B-cell leukemia homeobox 1 0.0141778
XPC xeroderma pigmentosum, complementation group C 0.0138255
XPO1 exportin 1 0.013811
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0137018
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0136911
SDK1 sidekick cell adhesion molecule 1 0.0136209
PNN pinin, desmosome associated protein 0.0135818
YAP1 Yes-associated protein 1 0.0135004
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.0134919
CEMIP2 cell migration inducing hyaluronidase 2 0.0132563
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0131091
GREB1 growth regulation by estrogen in breast cancer 1 0.0129376
TFRC transferrin receptor 0.0128361
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0128132
KDM6A lysine (K)-specific demethylase 6A 0.0127446
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0125907
RORA RAR-related orphan receptor A 0.0125775
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0125674
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) 0.0125353
SEC16A SEC16 homolog A (S. cerevisiae) 0.0125244

decreased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 -0.177807
RPL19 ribosomal protein L19 -0.170059
RPL23 ribosomal protein L23 -0.128635
CATSPERB catsper channel auxiliary subunit beta -0.123273
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.11869
ACACA acetyl-CoA carboxylase alpha -0.110028
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.108298
ASPH aspartate beta-hydroxylase -0.0961651
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.083024
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0691853
RIMS2 regulating synaptic membrane exocytosis 2 -0.0678558
ACTG1 actin gamma 1 -0.0649258
LPP LIM domain containing preferred translocation partner in lipoma -0.064855
PGK1 phosphoglycerate kinase 1 -0.0574201
LDHA lactate dehydrogenase A -0.0567295
TRPS1 trichorhinophalangeal syndrome I -0.0556364
CEP250 centrosomal protein 250kDa -0.0532118
CLTC clathrin, heavy chain (Hc) -0.0531521
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0529652
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0463916
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0446602
KRT19 keratin 19, type I -0.0445671
ENO1 enolase 1, (alpha) -0.0431613
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0427495
OSMR oncostatin M receptor -0.0427087
RAB22A RAB22A, member RAS oncogene family -0.0423149
IL1RAPL2 interleukin 1 receptor accessory protein-like 2 -0.0422877
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.042143
POTEF POTE ankyrin domain family, member F -0.0416584
CCND1 cyclin D1 -0.0406814
ZBTB20 zinc finger and BTB domain containing 20 -0.0402651
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0399861
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0391764
PATJ PATJ crumbs cell polarity complex component -0.0374854
TMSB10 thymosin beta 10 -0.0370741
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -0.037074
CCNI cyclin I -0.0364538
AHNAK AHNAK nucleoprotein -0.0363362
LMAN1 lectin, mannose-binding, 1 -0.036281
SBF2 SET binding factor 2 -0.0357413
PTMA prothymosin, alpha -0.0356735
SLC38A1 solute carrier family 38, member 1 -0.0356494
ZNF652 zinc finger protein 652 -0.0352889
TMEM123 transmembrane protein 123 -0.034884
LIMCH1 LIM and calponin homology domains 1 -0.0347985
MIPOL1 mirror-image polydactyly 1 -0.0344667
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0340511
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0332739
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0328479
KRT18 keratin 18, type I -0.0318382
NDRG1 N-myc downstream regulated 1 -0.0314151
LOC112694756 uncharaterized LOC112694756 -0.0312116
KRT7 keratin 7, type II -0.0307113
FADS2 fatty acid desaturase 2 -0.0304461
RAB7A RAB7A, member RAS oncogene family -0.030289
TPM4 tropomyosin 4 -0.030037
FOXO3 forkhead box O3 -0.0298449
NCOA6 nuclear receptor coactivator 6 -0.0296011
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0291655
SP100 SP100 nuclear antigen -0.0286122
TMSB4X thymosin beta 4, X-linked -0.02841
SETD5 SET domain containing 5 -0.0284032
CANX calnexin -0.0281155
TOM1L1 target of myb1 (chicken)-like 1 -0.0277426
RPL35A ribosomal protein L35a -0.0271908
S100A6 S100 calcium binding protein A6 -0.0269376
INTS6 integrator complex subunit 6 -0.026507
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0262644
TMC5 transmembrane channel-like 5 -0.0261395
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0259975
GLCCI1 glucocorticoid induced 1 -0.0259467
S100A9 S100 calcium binding protein A9 -0.025812
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0257852
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.025478
S100A14 S100 calcium binding protein A14 -0.0254412
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0250653
KRT8 keratin 8, type II -0.0250069
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0249254
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.024842
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 -0.0247487
TTC6 tetratricopeptide repeat domain 6 -0.0244302
SRCIN1 SRC kinase signaling inhibitor 1 -0.0242705
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0242006
ATXN1 ataxin 1 -0.0241819
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0241343
AHR aryl hydrocarbon receptor -0.0239407
DSTN destrin (actin depolymerizing factor) -0.0238415
TPT1 tumor protein, translationally-controlled 1 -0.0237892
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0237633
LASP1 LIM and SH3 protein 1 -0.0235409
CD164 CD164 molecule, sialomucin -0.0234923
ZNFX1 zinc finger, NFX1-type containing 1 -0.023429
DSG2 desmoglein 2 -0.0234038
ANXA2 annexin A2 -0.0232894
CLIP1 CAP-GLY domain containing linker protein 1 -0.0228024
GSK3B glycogen synthase kinase 3 beta -0.0223101
ADGRG6 adhesion G protein-coupled receptor G6 -0.0223064
SAMD4A sterile alpha motif domain containing 4A -0.0222404
FNDC3A fibronectin type III domain containing 3A -0.022232
PRR11 proline rich 11 -0.0221671