Epirubicin (hydrochloride)_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
JMJD1C jumonji domain containing 1C 0.0535867
NALF1 NALCN channel auxiliary factor 1 0.0446544
KMT2C lysine (K)-specific methyltransferase 2C 0.0438644
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0425765
DST dystonin 0.042065
GPHN gephyrin 0.0419902
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0394285
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0388953
KDM6A lysine (K)-specific demethylase 6A 0.0382781
ZNF292 zinc finger protein 292 0.037863
AUTS2 autism susceptibility candidate 2 0.0377831
ZFAND3 zinc finger, AN1-type domain 3 0.0364209
QKI QKI, KH domain containing, RNA binding 0.0350871
KIAA1958 KIAA1958 0.0336994
NUP58 nucleoporin 58 0.0333614
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0333335
PIAS2 protein inhibitor of activated STAT, 2 0.032722
HELZ helicase with zinc finger 0.0325726
SRPK2 SRSF protein kinase 2 0.0324852
RTN4 reticulon 4 0.0318554
RNF150 ring finger protein 150 0.0313902
DOCK3 dedicator of cytokinesis 3 0.0313073
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0306297
MEF2A myocyte enhancer factor 2A 0.0302877
PDS5B PDS5 cohesin associated factor B 0.0296008
ARL15 ADP-ribosylation factor-like 15 0.0294874
MED13L mediator complex subunit 13-like 0.0293873
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.028398
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0279321
FNBP1L formin binding protein 1-like 0.0277535
TBC1D5 TBC1 domain family, member 5 0.0273589
MIMS1 mitochondrial inner membrane scaffold 1 0.0272208
TTC28 tetratricopeptide repeat domain 28 0.0268289
SLF1 SMC5-SMC6 complex localization factor 1 0.0263813
H1-0 H1.0 linker histone 0.0263047
CCNL1 cyclin L1 0.025825
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.0257535
OGA O-GlcNAcase 0.0257111
BBX bobby sox homolog (Drosophila) 0.0256926
SSBP2 single-stranded DNA binding protein 2 0.0255355
PCBP2 poly(rC) binding protein 2 0.0254278
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0253606
XPO1 exportin 1 0.0252987
PBX3 pre-B-cell leukemia homeobox 3 0.0251361
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0248158
NAMPT nicotinamide phosphoribosyltransferase 0.0246284
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0243997
FAM162A family with sequence similarity 162, member A 0.0242316
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0239784
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0238631
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0237867
KMT2E lysine (K)-specific methyltransferase 2E 0.0237383
PTK2 protein tyrosine kinase 2 0.0236384
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0235534
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0233244
LCORL ligand dependent nuclear receptor corepressor-like 0.0232661
PCNX1 pecanex 1 0.0232128
PRELID2 PRELI domain containing 2 0.0231012
USP9X ubiquitin specific peptidase 9, X-linked 0.0229562
SYNE2 spectrin repeat containing, nuclear envelope 2 0.022862
ZNF638 zinc finger protein 638 0.0228253
CARD18 caspase recruitment domain family, member 18 0.0225901
IPO7 importin 7 0.0224549
SEPTIN7 septin 7 0.0223363
WDFY3 WD repeat and FYVE domain containing 3 0.0222422
NEK7 NIMA-related kinase 7 0.0221243
TET2 tet methylcytosine dioxygenase 2 0.0219679
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0217518
PHF21A PHD finger protein 21A 0.0217034
TNRC6A trinucleotide repeat containing 6A 0.021697
SRSF4 serine/arginine-rich splicing factor 4 0.0216217
RLF rearranged L-myc fusion 0.0216053
TPI1 triosephosphate isomerase 1 0.0215778
CHD7 chromodomain helicase DNA binding protein 7 0.0215439
CHSY1 chondroitin sulfate synthase 1 0.0215275
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0214914
TOP2B topoisomerase (DNA) II beta 180kDa 0.0212622
RNF145 ring finger protein 145 0.0211219
TMCC1 transmembrane and coiled-coil domain family 1 0.0211081
MBD5 methyl-CpG binding domain protein 5 0.0209614
PTPRG protein tyrosine phosphatase, receptor type, G 0.0209593
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0207393
PARD3 par-3 family cell polarity regulator 0.0206814
PEAK1 pseudopodium-enriched atypical kinase 1 0.0203872
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0203612
UBA6 ubiquitin-like modifier activating enzyme 6 0.0202782
TPD52 tumor protein D52 0.0200823
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0200727
EXOC6B exocyst complex component 6B 0.0198956
EGR1 early growth response 1 0.0197931
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0196947
PUM2 pumilio RNA-binding family member 2 0.0196937
ESYT2 extended synaptotagmin-like protein 2 0.0196272
RAB6A RAB6A, member RAS oncogene family 0.0195818
MXI1 MAX interactor 1, dimerization protein 0.019527
TENT4A terminal nucleotidyltransferase 4A 0.0193753
CDC73 cell division cycle 73 0.0193712
STRN3 striatin, calmodulin binding protein 3 0.01937
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0192837
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0192649

decreased expression

Symbol Name Standardized Value
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.183423
SLIT2 slit homolog 2 (Drosophila) -0.145872
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.137
RAD51B RAD51 paralog B -0.134414
TENM3 teneurin transmembrane protein 3 -0.132907
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.126109
NEBL nebulette -0.125747
NPAS3 neuronal PAS domain protein 3 -0.105925
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.105671
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0942158
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0917929
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0772251
ZNF608 zinc finger protein 608 -0.0568891
ACTG1 actin gamma 1 -0.0556748
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0543292
OSBPL10 oxysterol binding protein-like 10 -0.0511157
CADM2 cell adhesion molecule 2 -0.0510908
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0501139
CDH18 cadherin 18, type 2 -0.0496177
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0447238
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0445361
PTMA prothymosin, alpha -0.0427006
ARHGAP32 Rho GTPase activating protein 32 -0.0425941
SOX4 SRY (sex determining region Y)-box 4 -0.0400401
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0366915
CANX calnexin -0.0365362
ATP9A ATPase, class II, type 9A -0.0363792
PRICKLE1 prickle homolog 1 (Drosophila) -0.0346203
RPS8 ribosomal protein S8 -0.0338675
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0336688
RPLP1 ribosomal protein, large, P1 -0.0325964
RCC1 regulator of chromosome condensation 1 -0.032289
ATP11A ATPase, class VI, type 11A -0.0305319
CELF2 CUGBP, Elav-like family member 2 -0.0301286
SERBP1 SERPINE1 mRNA binding protein 1 -0.0292345
FMNL2 formin-like 2 -0.0280497
GJA1 gap junction protein, alpha 1, 43kDa -0.0275909
RPL37A ribosomal protein L37a -0.0273122
ENO1 enolase 1, (alpha) -0.0267931
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0260149
DSCAM Down syndrome cell adhesion molecule -0.0258568
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0258311
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0257672
CCSER1 coiled-coil serine-rich protein 1 -0.0255851
TMSB10 thymosin beta 10 -0.0252189
LARS1 leucyl-tRNA synthetase 1 -0.0249183
MLIP muscular LMNA-interacting protein -0.0248462
RPL11 ribosomal protein L11 -0.0245756
ITSN1 intersectin 1 (SH3 domain protein) -0.0242732
TOM1L2 target of myb1-like 2 (chicken) -0.0238496
RPL34 ribosomal protein L34 -0.0232277
RPS24 ribosomal protein S24 -0.0229632
AEBP2 AE binding protein 2 -0.0228637
GAB2 GRB2-associated binding protein 2 -0.0227576
BPTF bromodomain PHD finger transcription factor -0.0226934
UBAP2 ubiquitin associated protein 2 -0.022581
RPS29 ribosomal protein S29 -0.0225667
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0223644
RPL26 ribosomal protein L26 -0.0221058
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0218625
EMP1 epithelial membrane protein 1 -0.0217475
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0217428
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5 -0.0216722
RPL38 ribosomal protein L38 -0.0216328
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0215238
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0211642
RPL31 ribosomal protein L31 -0.0209677
RPS3 ribosomal protein S3 -0.020925
DENND1A DENN/MADD domain containing 1A -0.0208597
IARS1 isoleucyl-tRNA synthetase 1 -0.0205338
PYGL phosphorylase, glycogen, liver -0.0203097
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0202808
RSL1D1 ribosomal L1 domain containing 1 -0.0201713
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta -0.020171
RPS27A ribosomal protein S27a -0.019764
RPL30 ribosomal protein L30 -0.019692
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0191332
RPS6 ribosomal protein S6 -0.0189698
TPT1 tumor protein, translationally-controlled 1 -0.0187434
USP34 ubiquitin specific peptidase 34 -0.0185702
BNC2 basonuclin 2 -0.0181379
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0181152
INTS6 integrator complex subunit 6 -0.0179391
TBCA tubulin folding cofactor A -0.0178558
HMGB1 high mobility group box 1 -0.0178228
RPL35A ribosomal protein L35a -0.0177765
RPS16 ribosomal protein S16 -0.0175637
EIF5B eukaryotic translation initiation factor 5B -0.0174883
HDAC4 histone deacetylase 4 -0.0173981
UBE3C ubiquitin protein ligase E3C -0.0173609
RPS12 ribosomal protein S12 -0.0167185
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.016629
ADGRG6 adhesion G protein-coupled receptor G6 -0.0164611
RPLP2 ribosomal protein, large, P2 -0.0163169
RPL36 ribosomal protein L36 -0.0163022
HMGA1 high mobility group AT-hook 1 -0.0162286
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0160102
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0159945
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.015946
KTN1 kinectin 1 (kinesin receptor) -0.0159279