Epirubicin (hydrochloride)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RNF213 ring finger protein 213 0.09741
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0726756
VCL vinculin 0.0584824
ZMYM2 zinc finger, MYM-type 2 0.0514511
RAD51B RAD51 paralog B 0.0477251
SAMD12 sterile alpha motif domain containing 12 0.0458366
CPNE4 copine IV 0.0434564
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0432994
NCKAP5 NCK-associated protein 5 0.041484
IFNGR1 interferon gamma receptor 1 0.0404846
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0392941
ARL15 ADP-ribosylation factor-like 15 0.0384151
LPP LIM domain containing preferred translocation partner in lipoma 0.0373721
DGKH diacylglycerol kinase, eta 0.0361665
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0339728
EXOC4 exocyst complex component 4 0.0336052
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0312397
USP49 ubiquitin specific peptidase 49 0.0309141
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0301764
SMAD3 SMAD family member 3 0.0292644
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0290379
SERINC5 serine incorporator 5 0.0288247
TSHZ2 teashirt zinc finger homeobox 2 0.0286388
DST dystonin 0.0286364
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0285804
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.02858
RABGAP1L RAB GTPase activating protein 1-like 0.0283173
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0277492
PRKCE protein kinase C, epsilon 0.0273948
BICRAL BICRA like chromatin remodeling complex associated protein 0.0267541
WNK1 WNK lysine deficient protein kinase 1 0.0267449
ANKRD10 ankyrin repeat domain 10 0.0259781
BBX bobby sox homolog (Drosophila) 0.0258347
BCAS3 breast carcinoma amplified sequence 3 0.0257584
SPIDR scaffolding protein involved in DNA repair 0.0254134
OARD1 O-acyl-ADP-ribose deacylase 1 0.0253366
PTGR1 prostaglandin reductase 1 0.0252994
MUC13 mucin 13, cell surface associated 0.0252757
SMYD3 SET and MYND domain containing 3 0.0251667
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0250698
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0249115
NFE2L1 nuclear factor, erythroid 2-like 1 0.024528
ADAM10 ADAM metallopeptidase domain 10 0.02417
SOS1 son of sevenless homolog 1 (Drosophila) 0.0240556
TXNRD1 thioredoxin reductase 1 0.0238109
ADAR adenosine deaminase, RNA-specific 0.0235478
PSPC1 paraspeckle component 1 0.0232582
FAF1 Fas (TNFRSF6) associated factor 1 0.0230614
TBC1D5 TBC1 domain family, member 5 0.0230467
SCAPER S-phase cyclin A-associated protein in the ER 0.0230453
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0227505
HDAC4 histone deacetylase 4 0.0222884
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0221415
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.0219133
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0217817
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0216777
PRELID2 PRELI domain containing 2 0.0215472
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 0.0212898
ZDHHC20 zinc finger, DHHC-type containing 20 0.0210431
TRAPPC9 trafficking protein particle complex 9 0.0210098
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0209792
GRHL2 grainyhead-like 2 (Drosophila) 0.0206452
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0203637
ETV6 ets variant 6 0.0203474
PLSCR2 phospholipid scramblase 2 0.0202896
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0199641
ITFG1 integrin alpha FG-GAP repeat containing 1 0.0198158
PTK2 protein tyrosine kinase 2 0.0197642
SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) 0.0197017
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0196097
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0194272
NCOA2 nuclear receptor coactivator 2 0.0194102
PIAS1 protein inhibitor of activated STAT, 1 0.0194085
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0192594
PHF3 PHD finger protein 3 0.0191524
PRRC2B proline-rich coiled-coil 2B 0.0190345
DISC1 disrupted in schizophrenia 1 0.0187766
CDC42SE2 CDC42 small effector 2 0.0183521
TENT5A terminal nucleotidyltransferase 5A 0.0182384
GPATCH8 G patch domain containing 8 0.0182253
AKR1C2 aldo-keto reductase family 1, member C2 0.0181541
LCORL ligand dependent nuclear receptor corepressor-like 0.018114
FRMD5 FERM domain containing 5 0.0180836
TBC1D4 TBC1 domain family, member 4 0.0180234
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0180215
RAD50 RAD50 homolog (S. cerevisiae) 0.0180051
RPL7L1 ribosomal protein L7-like 1 0.017928
STK24 serine/threonine kinase 24 0.0177366
CENPP centromere protein P 0.017722
DIAPH3 diaphanous-related formin 3 0.0177066
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0175987
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 0.01735
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0173267
CLEC16A C-type lectin domain family 16, member A 0.0173026
PUM1 pumilio RNA-binding family member 1 0.0172808
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0172555
PTPRK protein tyrosine phosphatase, receptor type, K 0.0172212
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0171701
NAV1 neuron navigator 1 0.017161
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0170651

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.187195
B2M beta-2-microglobulin -0.15747
LMO7 LIM domain 7 -0.148444
P4HB prolyl 4-hydroxylase, beta polypeptide -0.125473
EGR1 early growth response 1 -0.0985335
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0952674
MBNL2 muscleblind-like splicing regulator 2 -0.0949392
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0939252
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0921637
EZR ezrin -0.0913182
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.089891
NDRG1 N-myc downstream regulated 1 -0.0856994
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.081455
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0750313
SQSTM1 sequestosome 1 -0.0741721
FNDC3B fibronectin type III domain containing 3B -0.0727018
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0710354
MORF4L2 mortality factor 4 like 2 -0.0681198
PDIA3 protein disulfide isomerase family A, member 3 -0.0671597
MYO1E myosin IE -0.065085
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0627989
ANXA2 annexin A2 -0.0626825
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0621101
INTS6 integrator complex subunit 6 -0.0615597
RAB7A RAB7A, member RAS oncogene family -0.0610077
SEC31A SEC31 homolog A (S. cerevisiae) -0.0607705
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0603801
TPT1 tumor protein, translationally-controlled 1 -0.0588178
CALR calreticulin -0.0581149
COG6 component of oligomeric golgi complex 6 -0.0560713
TRIM2 tripartite motif containing 2 -0.0530505
LOC102724023 ES1 protein homolog, mitochondrial -0.0529281
MACC1 metastasis associated in colon cancer 1 -0.0528653
JUN jun proto-oncogene -0.0524735
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0520889
GMDS GDP-mannose 4,6-dehydratase -0.0518043
TXNIP thioredoxin interacting protein -0.0510064
HM13 histocompatibility (minor) 13 -0.0496832
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0495712
SPDYA speedy/RINGO cell cycle regulator family member A -0.0474229
AKAP9 A kinase (PRKA) anchor protein 9 -0.046754
UFM1 ubiquitin-fold modifier 1 -0.0464867
RRBP1 ribosome binding protein 1 -0.0449623
IRF1 interferon regulatory factor 1 -0.0447856
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0445652
RHOBTB3 Rho-related BTB domain containing 3 -0.0443144
UGDH UDP-glucose 6-dehydrogenase -0.0441056
RAB1A RAB1A, member RAS oncogene family -0.0439889
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.042939
SREBF2 sterol regulatory element binding transcription factor 2 -0.0425526
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0420689
FNDC3A fibronectin type III domain containing 3A -0.0418941
COPA coatomer protein complex, subunit alpha -0.0418929
SEC24A SEC24 family member A -0.0415436
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0413969
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0413942
TSC22D2 TSC22 domain family, member 2 -0.041151
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0408037
SPAG9 sperm associated antigen 9 -0.0404039
GOLGB1 golgin B1 -0.0402987
ACBD3 acyl-CoA binding domain containing 3 -0.0398533
ZMYND8 zinc finger, MYND-type containing 8 -0.0398409
UBC ubiquitin C -0.0395507
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0393183
HDLBP high density lipoprotein binding protein -0.0392245
ITGA6 integrin, alpha 6 -0.0389913
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0387194
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0385357
ITPKC inositol-trisphosphate 3-kinase C -0.0380683
ADIPOR2 adiponectin receptor 2 -0.0378947
BTBD9 BTB (POZ) domain containing 9 -0.0375001
WDR45B WD repeat domain 45B -0.0373922
GOLGA2 golgin A2 -0.0371308
TSC22D1 TSC22 domain family, member 1 -0.0368766
TMC5 transmembrane channel-like 5 -0.036851
DSCAM Down syndrome cell adhesion molecule -0.0365568
EPSTI1 epithelial stromal interaction 1 (breast) -0.0363482
TTC3 tetratricopeptide repeat domain 3 -0.0361416
ARF4 ADP-ribosylation factor 4 -0.0359338
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0356937
AGR2 anterior gradient 2 -0.0356798
CALU calumenin -0.0356062
SEC24D SEC24 family member D -0.0351621
HLA-B major histocompatibility complex, class I, B -0.0348252
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0348204
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0345187
ANXA1 annexin A1 -0.0340701
EIF1 eukaryotic translation initiation factor 1 -0.0334811
PERP PERP, TP53 apoptosis effector -0.0330447
MT2A metallothionein 2A -0.0328726
KMT2E lysine (K)-specific methyltransferase 2E -0.0321705
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0321487
PKM pyruvate kinase, muscle -0.0321468
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0319584
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0318457
TMEM263 transmembrane protein 263 -0.0312747
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0310259
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0310031
FTL ferritin, light polypeptide -0.0306612
CDHR2 cadherin-related family member 2 -0.0305902