Epirubicin (hydrochloride)_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.100418
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0961615
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0877042
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0688708
PRELID2 PRELI domain containing 2 0.0596447
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0546359
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0537198
EEF2 eukaryotic translation elongation factor 2 0.05222
GOLGA4 golgin A4 0.0492489
RPS2 ribosomal protein S2 0.0446694
RAD51B RAD51 paralog B 0.043177
GARS1 glycyl-tRNA synthetase 1 0.0410609
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0381279
FTH1 ferritin, heavy polypeptide 1 0.0349798
TXNRD1 thioredoxin reductase 1 0.0341271
RPL4 ribosomal protein L4 0.0336569
FAM117B family with sequence similarity 117, member B 0.0335471
NUP58 nucleoporin 58 0.0319489
RPS6 ribosomal protein S6 0.0317746
PCBP2 poly(rC) binding protein 2 0.0315943
EIF4H eukaryotic translation initiation factor 4H 0.0309621
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0302242
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0301307
KIAA1217 KIAA1217 0.0295616
HELZ helicase with zinc finger 0.0290819
YEATS2 YEATS domain containing 2 0.0290453
RNMT RNA (guanine-7-) methyltransferase 0.02863
EIF1 eukaryotic translation initiation factor 1 0.0284318
PNISR PNN-interacting serine/arginine-rich protein 0.027871
DIAPH3 diaphanous-related formin 3 0.0277027
OGA O-GlcNAcase 0.02762
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0274614
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0271583
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0270379
SFXN1 sideroflexin 1 0.0267878
DDIT4 DNA-damage-inducible transcript 4 0.02662
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0260861
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0256136
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0254976
SEC24D SEC24 family member D 0.0254631
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0250697
RUNX1 runt-related transcription factor 1 0.0247075
ZFAND3 zinc finger, AN1-type domain 3 0.0246828
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0243453
HSPA8 heat shock 70kDa protein 8 0.0242364
KTN1 kinectin 1 (kinesin receptor) 0.024202
ACBD3 acyl-CoA binding domain containing 3 0.023612
RSRC2 arginine/serine-rich coiled-coil 2 0.0235206
MIMS1 mitochondrial inner membrane scaffold 1 0.0234706
PDIA4 protein disulfide isomerase family A, member 4 0.0233769
AVL9 AVL9 homolog (S. cerevisiase) 0.0233051
BHLHE40 basic helix-loop-helix family, member e40 0.023197
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.023171
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 0.0228758
USP37 ubiquitin specific peptidase 37 0.0227744
KDM6A lysine (K)-specific demethylase 6A 0.0227372
SUCO SUN domain containing ossification factor 0.022601
RIOK3 RIO kinase 3 0.0225487
SETD5 SET domain containing 5 0.0224567
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0220467
PGAM4 phosphoglycerate mutase family member 4 0.0218719
RBM39 RNA binding motif protein 39 0.021495
ATAD2 ATPase family, AAA domain containing 2 0.0213062
TPR translocated promoter region, nuclear basket protein 0.0212729
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0212569
COG5 component of oligomeric golgi complex 5 0.0212362
POM121C POM121 transmembrane nucleoporin C 0.0210259
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.02101
ANKZF1 ankyrin repeat and zinc finger domain containing 1 0.0209106
NBAS neuroblastoma amplified sequence 0.0208179
INSIG2 insulin induced gene 2 0.0208004
RNF24 ring finger protein 24 0.0206878
MAP2K1 mitogen-activated protein kinase kinase 1 0.0200367
CCNG2 cyclin G2 0.0199984
NAMPT nicotinamide phosphoribosyltransferase 0.0199809
RARS1 arginyl-tRNA synthetase 1 0.0199523
TLN1 talin 1 0.0197028
ZNF654 zinc finger protein 654 0.0197001
PER1 period circadian clock 1 0.0196926
MYO1B myosin IB 0.0196801
LNPK lunapark, ER junction formation factor 0.0196355
COG6 component of oligomeric golgi complex 6 0.0194141
ATXN2L ataxin 2-like 0.0194133
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.019198
ZNF292 zinc finger protein 292 0.0189201
PRPF4B pre-mRNA processing factor 4B 0.0189108
BRD4 bromodomain containing 4 0.0187884
GOLGA2 golgin A2 0.0187446
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0186266
MED15 mediator complex subunit 15 0.0185268
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0182771
CEP57 centrosomal protein 57kDa 0.0181851
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0181511
ERRFI1 ERBB receptor feedback inhibitor 1 0.0181494
MATR3 matrin 3 0.0180623
TPM3 tropomyosin 3 0.0179334
SRP54 signal recognition particle 54kDa 0.0178884
SRRM1 serine/arginine repetitive matrix 1 0.0177976
PAPOLA poly(A) polymerase alpha 0.0177601
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.017725

decreased expression

Symbol Name Standardized Value
FAT1 FAT atypical cadherin 1 -0.240786
PTMA prothymosin, alpha -0.213093
TMSB10 thymosin beta 10 -0.140306
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.131632
TPT1 tumor protein, translationally-controlled 1 -0.105458
AHNAK AHNAK nucleoprotein -0.101433
EGR1 early growth response 1 -0.0811733
EZR ezrin -0.074971
NDRG1 N-myc downstream regulated 1 -0.0726314
TPM4 tropomyosin 4 -0.0675648
MT2A metallothionein 2A -0.0625619
RAB7A RAB7A, member RAS oncogene family -0.0615601
ACTG1 actin gamma 1 -0.0557439
KRT18 keratin 18, type I -0.0529975
MCL1 myeloid cell leukemia 1 -0.0476574
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0476053
PATJ PATJ crumbs cell polarity complex component -0.0471615
RPL35A ribosomal protein L35a -0.0465598
SERINC5 serine incorporator 5 -0.0459891
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0451749
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0443565
VCL vinculin -0.0436138
ARF4 ADP-ribosylation factor 4 -0.042403
EPCAM epithelial cell adhesion molecule -0.0418211
FAF1 Fas (TNFRSF6) associated factor 1 -0.0404514
ACTN4 actinin, alpha 4 -0.0401129
S100A10 S100 calcium binding protein A10 -0.0389231
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0386392
JUN jun proto-oncogene -0.0361942
SPIDR scaffolding protein involved in DNA repair -0.0360986
KRT19 keratin 19, type I -0.0352901
POTEF POTE ankyrin domain family, member F -0.0349416
HMGA1 high mobility group AT-hook 1 -0.0338999
TENM3 teneurin transmembrane protein 3 -0.0333489
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0332185
MKI67 marker of proliferation Ki-67 -0.0331224
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.032862
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0328577
CCND1 cyclin D1 -0.0324876
PKM pyruvate kinase, muscle -0.0323923
RPS24 ribosomal protein S24 -0.0314719
SPDYA speedy/RINGO cell cycle regulator family member A -0.031116
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0309698
KLF6 Kruppel-like factor 6 -0.0307663
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0304258
S100A6 S100 calcium binding protein A6 -0.030234
HMGA2 high mobility group AT-hook 2 -0.0302264
RPL34 ribosomal protein L34 -0.0299152
RPS8 ribosomal protein S8 -0.0295489
RPS13 ribosomal protein S13 -0.0290342
DIAPH2 diaphanous-related formin 2 -0.0288795
ITPKC inositol-trisphosphate 3-kinase C -0.0287665
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0286785
LOC102724023 ES1 protein homolog, mitochondrial -0.0279351
RPLP1 ribosomal protein, large, P1 -0.0271557
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0270272
ARHGAP5 Rho GTPase activating protein 5 -0.0268301
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0263181
CD2AP CD2-associated protein -0.0258162
RPLP0 ribosomal protein, large, P0 -0.0258035
ARHGAP32 Rho GTPase activating protein 32 -0.0256334
BPTF bromodomain PHD finger transcription factor -0.0251263
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0250962
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0249236
CBX3 chromobox homolog 3 -0.0247643
SLC38A2 solute carrier family 38, member 2 -0.0243111
SBF2 SET binding factor 2 -0.0241875
MYO1E myosin IE -0.0241007
S100A9 S100 calcium binding protein A9 -0.0240871
SLC38A1 solute carrier family 38, member 1 -0.0240481
MED13 mediator complex subunit 13 -0.0234578
EIF5B eukaryotic translation initiation factor 5B -0.0234505
FRMD5 FERM domain containing 5 -0.0232589
ZFHX3 zinc finger homeobox 3 -0.0229611
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0224582
FBXL2 F-box and leucine-rich repeat protein 2 -0.0222977
KRT8 keratin 8, type II -0.0222859
PFN1 profilin 1 -0.022173
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0221272
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0220067
HMGB1 high mobility group box 1 -0.0218653
MYL12B myosin, light chain 12B, regulatory -0.0215544
ENO1 enolase 1, (alpha) -0.021547
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0214635
TSC22D1 TSC22 domain family, member 1 -0.0214269
RHOA ras homolog family member A -0.0213268
RPL31 ribosomal protein L31 -0.0212081
IFITM3 interferon induced transmembrane protein 3 -0.0211885
MSI2 musashi RNA-binding protein 2 -0.0210382
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0210289
PDLIM5 PDZ and LIM domain 5 -0.0209135
CENPF centromere protein F, 350/400kDa -0.0208824
WWC1 WW and C2 domain containing 1 -0.0208545
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0207279
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0203331
RPS25 ribosomal protein S25 -0.0202055
GPHN gephyrin -0.0201862
ITPRID2 ITPR interacting domain containing 2 -0.0201166
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0200822
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0199083