Epirubicin (hydrochloride)_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.223548
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0463194
VCL vinculin 0.0434558
HSPA8 heat shock 70kDa protein 8 0.0303169
FLNA filamin A, alpha 0.0292465
RPS2 ribosomal protein S2 0.0279607
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0257189
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0255781
RPS6 ribosomal protein S6 0.0252812
RPL4 ribosomal protein L4 0.0233941
MT2A metallothionein 2A 0.0221474
RPS12 ribosomal protein S12 0.021988
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0217139
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.021231
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.020399
FTH1 ferritin, heavy polypeptide 1 0.0203247
RPS8 ribosomal protein S8 0.0195342
TPI1 triosephosphate isomerase 1 0.0189556
RPL37A ribosomal protein L37a 0.018696
RPL12 ribosomal protein L12 0.0171789
RPL26 ribosomal protein L26 0.0170215
RPS17 ribosomal protein S17 0.0166249
RPS19 ribosomal protein S19 0.0163926
EGR1 early growth response 1 0.0162349
NFE2L1 nuclear factor, erythroid 2-like 1 0.0159414
RPLP2 ribosomal protein, large, P2 0.0153841
RPS3 ribosomal protein S3 0.0152035
PDLIM5 PDZ and LIM domain 5 0.0150411
TIMP1 TIMP metallopeptidase inhibitor 1 0.0148294
SLIT2 slit homolog 2 (Drosophila) 0.0148261
PGAM4 phosphoglycerate mutase family member 4 0.0146148
RACK1 receptor for activated C kinase 1 0.014612
WWOX WW domain containing oxidoreductase 0.0145162
EIF1 eukaryotic translation initiation factor 1 0.0144734
RPS16 ribosomal protein S16 0.0142848
ZSWIM6 zinc finger, SWIM-type containing 6 0.0142417
NABP1 nucleic acid binding protein 1 0.0139538
SHISA5 shisa family member 5 0.0137506
RPL32 ribosomal protein L32 0.0137224
SLC25A51 solute carrier family 25, member 51 0.0135864
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0135057
HMGB2 high mobility group box 2 0.0134097
CAPRIN2 caprin family member 2 0.013002
CLIC4 chloride intracellular channel 4 0.0128748
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) 0.0128626
LOC112694756 uncharaterized LOC112694756 0.0128015
EEF1G eukaryotic translation elongation factor 1 gamma 0.012533
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0125086
PALLD palladin, cytoskeletal associated protein 0.0124514
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0121095
BICD1 bicaudal D homolog 1 (Drosophila) 0.0116884
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0113356
RPL27 ribosomal protein L27 0.0111102
RPL9 ribosomal protein L9 0.0110389
H1-4 H1.4 linker histone, cluster member 0.0107931
RPS27A ribosomal protein S27a 0.0107465
NECTIN2 nectin cell adhesion molecule 2 0.0105602
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0104897
RPL28 ribosomal protein L28 0.0104347
PODXL podocalyxin-like 0.0103142
RPL11 ribosomal protein L11 0.0101824
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 0.0100797
FTL ferritin, light polypeptide 0.0100787
IPO9 importin 9 0.0100614
LRMDA leucine rich melanocyte differentiation associated 0.0100068
IPO7 importin 7 0.00987416
PLAUR plasminogen activator, urokinase receptor 0.00977951
STAT1 signal transducer and activator of transcription 1, 91kDa 0.00967978
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.00957923
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.009543
RPL34 ribosomal protein L34 0.00949987
HMGN2 high mobility group nucleosomal binding domain 2 0.0093874
RCOR1 REST corepressor 1 0.00924278
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.009212
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.00915645
RPL13A ribosomal protein L13a 0.00907192
RPL14 ribosomal protein L14 0.00899247
MPRIP myosin phosphatase Rho interacting protein 0.00898536
EIF4H eukaryotic translation initiation factor 4H 0.00892674
TOP1 topoisomerase (DNA) I 0.00864284
BZW1 basic leucine zipper and W2 domains 1 0.00857125
SPIDR scaffolding protein involved in DNA repair 0.0085283
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 0.00851697
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.00843709
THBS1 thrombospondin 1 0.00843517
PNN pinin, desmosome associated protein 0.008373
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.00817015
FHL2 four and a half LIM domains 2 0.00811242
TTC23L tetratricopeptide repeat domain 23-like 0.00804099
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.00794069
TUBB4B tubulin, beta 4B class IVb 0.00790589
KDM5C lysine (K)-specific demethylase 5C 0.00790433
BHLHE40 basic helix-loop-helix family, member e40 0.00788367
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.00788009
ATP5F1E ATP synthase F1 subunit epsilon 0.00785362
NAP1L1 nucleosome assembly protein 1-like 1 0.00784287
DGKI diacylglycerol kinase, iota 0.00769499
EIF3I eukaryotic translation initiation factor 3, subunit I 0.00766857
MCTP1 multiple C2 domains, transmembrane 1 0.00765333
RPS10 ribosomal protein S10 0.00765047

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.358512
VIM vimentin -0.276173
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.216799
IGF2 insulin-like growth factor 2 -0.171448
NDRG1 N-myc downstream regulated 1 -0.159434
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.134002
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.127107
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.121305
CXCL8 chemokine (C-X-C motif) ligand 8 -0.11958
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.118241
TRIO trio Rho guanine nucleotide exchange factor -0.098712
FAM13A family with sequence similarity 13, member A -0.0844231
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0829328
RAI14 retinoic acid induced 14 -0.080801
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0807328
FNDC3B fibronectin type III domain containing 3B -0.0798289
IGFBP3 insulin-like growth factor binding protein 3 -0.0774933
CDH13 cadherin 13 -0.0770559
MYO10 myosin X -0.0747763
COL6A1 collagen, type VI, alpha 1 -0.0706054
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0689708
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.067661
JARID2 jumonji, AT rich interactive domain 2 -0.067524
PGK1 phosphoglycerate kinase 1 -0.0656524
GRB10 growth factor receptor-bound protein 10 -0.0653352
NGLY1 N-glycanase 1 -0.0643002
PDE10A phosphodiesterase 10A -0.0641048
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0626336
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0623192
COL5A1 collagen, type V, alpha 1 -0.0610736
TENM2 teneurin transmembrane protein 2 -0.0579321
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0571287
SBF2 SET binding factor 2 -0.0569477
RUNX1 runt-related transcription factor 1 -0.0560968
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0535531
USP34 ubiquitin specific peptidase 34 -0.0532046
COL6A2 collagen, type VI, alpha 2 -0.0530243
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0514483
FLNB filamin B, beta -0.0508387
COPA coatomer protein complex, subunit alpha -0.0508376
ZMYND8 zinc finger, MYND-type containing 8 -0.0488882
ANKRD28 ankyrin repeat domain 28 -0.0487903
CD109 CD109 molecule -0.0484453
ADM adrenomedullin -0.0482558
SETD5 SET domain containing 5 -0.0480083
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0472259
TMEM165 transmembrane protein 165 -0.0465563
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0460389
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0459478
BIRC6 baculoviral IAP repeat containing 6 -0.0457577
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0454318
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0452393
MMP12 matrix metallopeptidase 12 -0.0447924
CANX calnexin -0.0438089
PTK2 protein tyrosine kinase 2 -0.0436755
SEC31A SEC31 homolog A (S. cerevisiae) -0.0434319
RNF24 ring finger protein 24 -0.0431634
COL6A3 collagen, type VI, alpha 3 -0.0430199
INSIG2 insulin induced gene 2 -0.042859
ANKRD12 ankyrin repeat domain 12 -0.0424986
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0423035
DST dystonin -0.0422696
NF1 neurofibromin 1 -0.0421869
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0421643
SEC24A SEC24 family member A -0.0417009
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0416264
ANXA2 annexin A2 -0.0415181
RAB1A RAB1A, member RAS oncogene family -0.0414655
HMGA2 high mobility group AT-hook 2 -0.0403721
CLMP CXADR-like membrane protein -0.0403464
CALU calumenin -0.040081
TTC3 tetratricopeptide repeat domain 3 -0.0400057
TMSB10 thymosin beta 10 -0.0393237
LIMCH1 LIM and calponin homology domains 1 -0.0391768
GLIS3 GLIS family zinc finger 3 -0.0387707
LOX lysyl oxidase -0.0382652
MRPS6 mitochondrial ribosomal protein S6 -0.0381943
RNMT RNA (guanine-7-) methyltransferase -0.0376454
PDIA3 protein disulfide isomerase family A, member 3 -0.0375108
GOLGA4 golgin A4 -0.0374083
ESYT2 extended synaptotagmin-like protein 2 -0.0371568
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0370476
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0367216
MORF4L2 mortality factor 4 like 2 -0.0364085
KDM2A lysine (K)-specific demethylase 2A -0.036404
ANKRD11 ankyrin repeat domain 11 -0.0362707
DIAPH2 diaphanous-related formin 2 -0.0361361
KMT2C lysine (K)-specific methyltransferase 2C -0.0354008
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0352351
TAS2R14 taste receptor, type 2, member 14 -0.0350864
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0349349
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0349178
RASA3 RAS p21 protein activator 3 -0.034889
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0342649
MAML3 mastermind-like 3 (Drosophila) -0.0341937
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0341141
FMN1 formin 1 -0.0336318
LAMB3 laminin, beta 3 -0.0328448
MAP4 microtubule-associated protein 4 -0.0327869
LMAN1 lectin, mannose-binding, 1 -0.0326175