Epirubicin (hydrochloride)_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0606483
EGFR epidermal growth factor receptor 0.0523166
CDH13 cadherin 13 0.0522503
FTH1 ferritin, heavy polypeptide 1 0.0510776
RPS6 ribosomal protein S6 0.0443828
EFNA5 ephrin-A5 0.0418718
STC1 stanniocalcin 1 0.0410029
DOCK5 dedicator of cytokinesis 5 0.0334773
TGFBI transforming growth factor, beta-induced, 68kDa 0.0313838
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0301784
EEF2 eukaryotic translation elongation factor 2 0.0286215
STC2 stanniocalcin 2 0.0275857
FLNA filamin A, alpha 0.0274016
CADM1 cell adhesion molecule 1 0.027279
RPS2 ribosomal protein S2 0.026388
RUNX1 runt-related transcription factor 1 0.0259488
AXL AXL receptor tyrosine kinase 0.0251242
NFE2L1 nuclear factor, erythroid 2-like 1 0.0238675
FGFR1 fibroblast growth factor receptor 1 0.0236778
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0231402
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0222722
ABI3BP ABI family, member 3 (NESH) binding protein 0.0222606
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0222355
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0214549
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0201605
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0200462
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0191397
CLMP CXADR-like membrane protein 0.0190101
CA12 carbonic anhydrase XII 0.0187303
CCNL1 cyclin L1 0.0185569
DTNA dystrobrevin, alpha 0.0182388
TNIP1 TNFAIP3 interacting protein 1 0.0181854
TPI1 triosephosphate isomerase 1 0.0180076
SLC22A23 solute carrier family 22, member 23 0.0179079
NAP1L1 nucleosome assembly protein 1-like 1 0.0178076
EIF1 eukaryotic translation initiation factor 1 0.0178014
HMGA2 high mobility group AT-hook 2 0.017465
HSPA8 heat shock 70kDa protein 8 0.0173883
DLG1 discs, large homolog 1 (Drosophila) 0.0173644
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0172367
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0169655
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0169501
RAD51B RAD51 paralog B 0.0168644
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0168474
BHLHE40 basic helix-loop-helix family, member e40 0.0164447
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0164038
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0161498
MACF1 microtubule-actin crosslinking factor 1 0.0156965
RPL4 ribosomal protein L4 0.0144461
ANTXR2 anthrax toxin receptor 2 0.0144299
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0142181
ECE1 endothelin converting enzyme 1 0.0139776
RIN2 Ras and Rab interactor 2 0.013786
PGAM4 phosphoglycerate mutase family member 4 0.01372
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0136111
ERRFI1 ERBB receptor feedback inhibitor 1 0.0134861
IL6 interleukin 6 0.0133607
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0133305
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0132471
AKAP12 A kinase (PRKA) anchor protein 12 0.0129442
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.012917
XYLT1 xylosyltransferase I 0.0128548
RPS12 ribosomal protein S12 0.0128118
NAV2 neuron navigator 2 0.0127275
UGCG UDP-glucose ceramide glucosyltransferase 0.0124643
FAM219A family with sequence similarity 219, member A 0.0123793
MYO10 myosin X 0.0123415
SMAD3 SMAD family member 3 0.0122499
HSPG2 heparan sulfate proteoglycan 2 0.0122399
LOX lysyl oxidase 0.0122043
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0121925
EEF1G eukaryotic translation elongation factor 1 gamma 0.0120248
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0119368
NBAS neuroblastoma amplified sequence 0.0119014
KIAA1549L KIAA1549-like 0.0118262
EXOC4 exocyst complex component 4 0.0117156
ARHGAP26 Rho GTPase activating protein 26 0.0116481
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0116353
PRR16 proline rich 16 0.0115175
SRRM1 serine/arginine repetitive matrix 1 0.0114999
SRRM2 serine/arginine repetitive matrix 2 0.0114636
LENG8 leukocyte receptor cluster (LRC) member 8 0.0113554
TMF1 TATA element modulatory factor 1 0.0112521
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0111077
TLN1 talin 1 0.0110616
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0109568
OXR1 oxidation resistance 1 0.0106567
DENND1A DENN/MADD domain containing 1A 0.0106321
PTPRM protein tyrosine phosphatase, receptor type, M 0.0106149
BRD2 bromodomain containing 2 0.0106007
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0104248
KTN1 kinectin 1 (kinesin receptor) 0.0103418
SESN2 sestrin 2 0.0103303
LAMB3 laminin, beta 3 0.0103172
YEATS2 YEATS domain containing 2 0.010313
HELZ helicase with zinc finger 0.0102696
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0102565
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0102299
RPL37A ribosomal protein L37a 0.0102207
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0102142

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.513376
IGFBP3 insulin-like growth factor binding protein 3 -0.266833
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.199736
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.112449
COL6A3 collagen, type VI, alpha 3 -0.111258
CXCL8 chemokine (C-X-C motif) ligand 8 -0.10434
CD44 CD44 molecule (Indian blood group) -0.0990278
PSD3 pleckstrin and Sec7 domain containing 3 -0.0660465
MT2A metallothionein 2A -0.0649365
VIM vimentin -0.0626678
TPM4 tropomyosin 4 -0.0593791
COL1A2 collagen, type I, alpha 2 -0.0561194
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0496223
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0495353
LDHA lactate dehydrogenase A -0.0484138
EXT1 exostosin glycosyltransferase 1 -0.0470199
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.045287
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0444933
TMSB10 thymosin beta 10 -0.0438498
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0433002
STAT1 signal transducer and activator of transcription 1, 91kDa -0.043275
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0431189
ALCAM activated leukocyte cell adhesion molecule -0.0429126
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0426797
COL1A1 collagen, type I, alpha 1 -0.0421614
LTBP1 latent transforming growth factor beta binding protein 1 -0.0409332
AHNAK AHNAK nucleoprotein -0.0406129
VCL vinculin -0.0394893
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0394684
DPYSL3 dihydropyrimidinase-like 3 -0.0377024
OSMR oncostatin M receptor -0.0375749
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0368604
POSTN periostin, osteoblast specific factor -0.0366176
MAP1B microtubule-associated protein 1B -0.0351807
CANX calnexin -0.0347226
RAD21 RAD21 homolog (S. pombe) -0.0337182
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0331186
PALLD palladin, cytoskeletal associated protein -0.0330135
LMAN1 lectin, mannose-binding, 1 -0.0325812
GLIS3 GLIS family zinc finger 3 -0.032483
RIGI RNA sensor RIG-I -0.0323417
PDLIM5 PDZ and LIM domain 5 -0.0322849
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0321902
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0319568
ATP13A3 ATPase type 13A3 -0.0316516
ZEB2 zinc finger E-box binding homeobox 2 -0.0303177
CLIC4 chloride intracellular channel 4 -0.0297419
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0289379
TRPS1 trichorhinophalangeal syndrome I -0.0286385
VCAN versican -0.0283127
RPL35A ribosomal protein L35a -0.0278126
RAB2A RAB2A, member RAS oncogene family -0.0274168
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0268761
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0266096
RRBP1 ribosome binding protein 1 -0.0263784
CALU calumenin -0.026038
ENO1 enolase 1, (alpha) -0.0258786
SP100 SP100 nuclear antigen -0.0256017
SPAG9 sperm associated antigen 9 -0.0255693
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0246277
ACTN4 actinin, alpha 4 -0.0246195
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0244477
FBN1 fibrillin 1 -0.0236445
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0235376
IER3 immediate early response 3 -0.0229263
ANXA2 annexin A2 -0.0229145
CAMTA1 calmodulin binding transcription activator 1 -0.0228454
PDE4D phosphodiesterase 4D, cAMP-specific -0.0228442
GPC6 glypican 6 -0.0223809
NAV1 neuron navigator 1 -0.0223313
PLSCR1 phospholipid scramblase 1 -0.021983
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0217345
TM4SF1 transmembrane 4 L six family member 1 -0.0215314
JAK2 Janus kinase 2 -0.0213978
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0213783
GRB10 growth factor receptor-bound protein 10 -0.0209809
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0203509
CALD1 caldesmon 1 -0.0201017
FBXL17 F-box and leucine-rich repeat protein 17 -0.0200542
TPM1 tropomyosin 1 (alpha) -0.0199111
MT1X metallothionein 1X -0.0198763
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0198281
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0197045
FAT1 FAT atypical cadherin 1 -0.0196056
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0195267
SAMD9 sterile alpha motif domain containing 9 -0.0194675
NRP1 neuropilin 1 -0.0192791
IFI16 interferon, gamma-inducible protein 16 -0.0192219
RAB1A RAB1A, member RAS oncogene family -0.0192118
RIPK2 receptor-interacting serine-threonine kinase 2 -0.0187936
MBNL1 muscleblind-like splicing regulator 1 -0.0185569
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 -0.0182627
PICALM phosphatidylinositol binding clathrin assembly protein -0.0179149
TMSB4X thymosin beta 4, X-linked -0.0177761
ZNF644 zinc finger protein 644 -0.0175432
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0173016
NRIP1 nuclear receptor interacting protein 1 -0.0172056
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0170597
NREP neuronal regeneration related protein -0.0170297
HAS2 hyaluronan synthase 2 -0.016786