Epirubicin (hydrochloride)_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.0463864
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0396138
NALF1 NALCN channel auxiliary factor 1 0.0381242
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0348115
MKI67 marker of proliferation Ki-67 0.0326018
RPS6 ribosomal protein S6 0.0315319
ASPH aspartate beta-hydroxylase 0.0314913
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0307698
FLNA filamin A, alpha 0.0306427
CCNL1 cyclin L1 0.0273773
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0256546
CENPF centromere protein F, 350/400kDa 0.0255436
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0246316
AXL AXL receptor tyrosine kinase 0.0237178
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0234212
IL6ST interleukin 6 signal transducer 0.0233763
MYH9 myosin, heavy chain 9, non-muscle 0.0224097
SAMD4A sterile alpha motif domain containing 4A 0.0223421
TLN1 talin 1 0.021343
DIAPH3 diaphanous-related formin 3 0.0212923
RPS2 ribosomal protein S2 0.0210221
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0209023
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0208224
PNN pinin, desmosome associated protein 0.0206544
TPM3 tropomyosin 3 0.0203471
TPX2 TPX2, microtubule-associated 0.0202218
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0199814
PRELID2 PRELI domain containing 2 0.0196762
MAML2 mastermind-like 2 (Drosophila) 0.0193729
SRRM2 serine/arginine repetitive matrix 2 0.0193719
PCLO piccolo presynaptic cytomatrix protein 0.0193651
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0192495
DST dystonin 0.0190803
MSN moesin 0.0190467
WNK1 WNK lysine deficient protein kinase 1 0.018827
MACF1 microtubule-actin crosslinking factor 1 0.0183399
NAV2 neuron navigator 2 0.0182357
FRMD4A FERM domain containing 4A 0.0181479
CKAP5 cytoskeleton associated protein 5 0.018121
STC2 stanniocalcin 2 0.0180566
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.017723
PHACTR1 phosphatase and actin regulator 1 0.0175859
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0174682
FNDC3B fibronectin type III domain containing 3B 0.017355
GLS2 glutaminase 2 (liver, mitochondrial) 0.0173027
SRRM1 serine/arginine repetitive matrix 1 0.0171986
RUNX1 runt-related transcription factor 1 0.017188
CD44 CD44 molecule (Indian blood group) 0.0169353
GOLGB1 golgin B1 0.016564
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 0.0164573
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0164182
TUBA1B tubulin, alpha 1b 0.0163649
CENPP centromere protein P 0.0163637
NFE2L1 nuclear factor, erythroid 2-like 1 0.0161452
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0158843
FNIP1 folliculin interacting protein 1 0.0154137
UBE2C ubiquitin-conjugating enzyme E2C 0.0153992
PEA15 phosphoprotein enriched in astrocytes 15 0.0151735
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.015131
HMGN2 high mobility group nucleosomal binding domain 2 0.01512
TUBA1C tubulin, alpha 1c 0.0150461
TNIP1 TNFAIP3 interacting protein 1 0.0149889
COL5A1 collagen, type V, alpha 1 0.0148582
VMP1 vacuole membrane protein 1 0.0148424
RPL4 ribosomal protein L4 0.0148312
DOCK5 dedicator of cytokinesis 5 0.0147834
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0146786
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0146417
CDK19 cyclin-dependent kinase 19 0.0145711
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0144627
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0144545
PCBP2 poly(rC) binding protein 2 0.014434
RAD51B RAD51 paralog B 0.014352
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0142983
SMAD3 SMAD family member 3 0.0142655
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0141386
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0139042
VCL vinculin 0.0138164
RPL21 ribosomal protein L21 0.0136924
RPS12 ribosomal protein S12 0.013686
EXOC4 exocyst complex component 4 0.0136548
TM9SF4 transmembrane 9 superfamily protein member 4 0.0136116
THSD4 thrombospondin, type I, domain containing 4 0.0135466
ABI3BP ABI family, member 3 (NESH) binding protein 0.0134094
NCOR2 nuclear receptor corepressor 2 0.0130517
PGAM4 phosphoglycerate mutase family member 4 0.0130387
SMC4 structural maintenance of chromosomes 4 0.0130076
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0130007
H1-4 H1.4 linker histone, cluster member 0.0129997
EGFR epidermal growth factor receptor 0.0128976
FER fer (fps/fes related) tyrosine kinase 0.0128698
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0128564
FGFR1 fibroblast growth factor receptor 1 0.0126091
PODXL podocalyxin-like 0.0125641
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0124359
CCDC14 coiled-coil domain containing 14 0.0124241
EEF2 eukaryotic translation elongation factor 2 0.0122919
HDAC9 histone deacetylase 9 0.0122638
FTH1 ferritin, heavy polypeptide 1 0.0122388
SLIT2 slit homolog 2 (Drosophila) 0.0122062

decreased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.145656
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.12881
FTL ferritin, light polypeptide -0.115577
UGCG UDP-glucose ceramide glucosyltransferase -0.0866961
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0851097
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0817123
DEK DEK proto-oncogene -0.0785926
NDRG1 N-myc downstream regulated 1 -0.0748612
LDHA lactate dehydrogenase A -0.0649069
F3 coagulation factor III (thromboplastin, tissue factor) -0.0625775
IGFBP3 insulin-like growth factor binding protein 3 -0.0574582
MT1X metallothionein 1X -0.0572629
PGK1 phosphoglycerate kinase 1 -0.0559389
TRIO trio Rho guanine nucleotide exchange factor -0.0550124
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0536163
HLA-B major histocompatibility complex, class I, B -0.0532135
ADM adrenomedullin -0.0498073
ANXA2 annexin A2 -0.0454077
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0436286
LMAN1 lectin, mannose-binding, 1 -0.0418381
TXNRD1 thioredoxin reductase 1 -0.0394995
RPL35A ribosomal protein L35a -0.038798
RAD21 RAD21 homolog (S. pombe) -0.0356705
ENO1 enolase 1, (alpha) -0.0352609
TPT1 tumor protein, translationally-controlled 1 -0.0352156
SOD2 superoxide dismutase 2, mitochondrial -0.0327239
LOC112694756 uncharaterized LOC112694756 -0.0322917
SPAG9 sperm associated antigen 9 -0.0317528
CANX calnexin -0.0316347
PDIA3 protein disulfide isomerase family A, member 3 -0.0289584
STK4 serine/threonine kinase 4 -0.0289135
KPNB1 karyopherin (importin) beta 1 -0.02881
RLF rearranged L-myc fusion -0.0286032
TSC22D2 TSC22 domain family, member 2 -0.0283405
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0282163
ANKRD10 ankyrin repeat domain 10 -0.0281682
TPD52 tumor protein D52 -0.0280537
S100A10 S100 calcium binding protein A10 -0.0274455
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0271196
MARCHF6 membrane associated ring-CH-type finger 6 -0.0270904
POTEF POTE ankyrin domain family, member F -0.0265319
DLG1 discs, large homolog 1 (Drosophila) -0.026515
UBC ubiquitin C -0.0262318
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0254529
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0252915
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0252909
HLA-C major histocompatibility complex, class I, C -0.0252508
EXT1 exostosin glycosyltransferase 1 -0.0248303
JUN jun proto-oncogene -0.02457
ANXA1 annexin A1 -0.0243016
TPM4 tropomyosin 4 -0.0238811
ACTG1 actin gamma 1 -0.0238297
TMSB10 thymosin beta 10 -0.0238276
PTMA prothymosin, alpha -0.0238014
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0237204
USP3 ubiquitin specific peptidase 3 -0.0236101
CUL4B cullin 4B -0.0236056
B2M beta-2-microglobulin -0.0233863
CAVIN1 caveolae associated protein 1 -0.0233682
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0231453
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0227869
ADAM9 ADAM metallopeptidase domain 9 -0.0222098
GNAS GNAS complex locus -0.0219383
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0218366
P4HB prolyl 4-hydroxylase, beta polypeptide -0.021706
MAP4 microtubule-associated protein 4 -0.0216048
RAB1A RAB1A, member RAS oncogene family -0.0214468
TMSB4X thymosin beta 4, X-linked -0.020758
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0207263
HILPDA hypoxia inducible lipid droplet-associated -0.0206942
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0205087
UFM1 ubiquitin-fold modifier 1 -0.020274
IER3 immediate early response 3 -0.0201212
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0198233
RAB2A RAB2A, member RAS oncogene family -0.0197333
PLIN2 perilipin 2 -0.0195993
WDR45B WD repeat domain 45B -0.0195977
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0195916
TKT transketolase -0.0195612
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0195592
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0194037
SEPTIN7 septin 7 -0.01914
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0189542
NAP1L4 nucleosome assembly protein 1-like 4 -0.0189408
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0188467
AHNAK AHNAK nucleoprotein -0.0188185
DENND4C DENN/MADD domain containing 4C -0.0187757
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0185676
RAD23B RAD23 homolog B (S. cerevisiae) -0.0181116
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0179925
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.017795
KDM3A lysine (K)-specific demethylase 3A -0.0177366
PICALM phosphatidylinositol binding clathrin assembly protein -0.017579
LOX lysyl oxidase -0.017523
AGTPBP1 ATP/GTP binding protein 1 -0.0175056
RTN3 reticulon 3 -0.0174053
NPEPPS aminopeptidase puromycin sensitive -0.0172396
CCBE1 collagen and calcium binding EGF domains 1 -0.017237
ZMYM2 zinc finger, MYM-type 2 -0.0171459
MYL12B myosin, light chain 12B, regulatory -0.0169192