Epirubicin (hydrochloride)_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in KATO III cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.113468
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0884544
FTH1 ferritin, heavy polypeptide 1 0.0829078
RPS2 ribosomal protein S2 0.0731554
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0672027
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0600715
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0600409
RPS12 ribosomal protein S12 0.0531854
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0512883
MKI67 marker of proliferation Ki-67 0.0452327
HSPA8 heat shock 70kDa protein 8 0.0438418
RPS3 ribosomal protein S3 0.0429668
NFE2L1 nuclear factor, erythroid 2-like 1 0.0401004
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0353073
RPL4 ribosomal protein L4 0.0344183
TPI1 triosephosphate isomerase 1 0.034206
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.034124
ANLN anillin, actin binding protein 0.0321569
RPS17 ribosomal protein S17 0.0315707
TPM3 tropomyosin 3 0.0315161
RPL37A ribosomal protein L37a 0.0312338
TUBA1B tubulin, alpha 1b 0.0304064
S100A11 S100 calcium binding protein A11 0.0301238
RPS8 ribosomal protein S8 0.0297
RPL21 ribosomal protein L21 0.0296407
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0279529
VIM vimentin 0.0274946
SRRM2 serine/arginine repetitive matrix 2 0.0273535
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0267885
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 0.0266009
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.02633
RPL18 ribosomal protein L18 0.0262617
PCBP2 poly(rC) binding protein 2 0.0257738
ERRFI1 ERBB receptor feedback inhibitor 1 0.0251616
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0245275
RPL28 ribosomal protein L28 0.0244059
EEF2 eukaryotic translation elongation factor 2 0.0243123
EEF1G eukaryotic translation elongation factor 1 gamma 0.0237139
TNS4 tensin 4 0.0235612
MUC1 mucin 1, cell surface associated 0.0224549
BCL9L B-cell CLL/lymphoma 9-like 0.0222016
PGAM4 phosphoglycerate mutase family member 4 0.0219116
CCNL1 cyclin L1 0.0217961
FLNA filamin A, alpha 0.0215111
HMGB2 high mobility group box 2 0.0213438
RPL11 ribosomal protein L11 0.0209197
PAPOLA poly(A) polymerase alpha 0.0202924
BRD4 bromodomain containing 4 0.0202476
FANCI Fanconi anemia, complementation group I 0.0197626
SET SET nuclear proto-oncogene 0.0197211
ITGB4 integrin, beta 4 0.0195871
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.0195559
CENPF centromere protein F, 350/400kDa 0.0187521
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.01869
YBX1 Y box binding protein 1 0.0185916
NARS1 asparaginyl-tRNA synthetase 1 0.018051
HMGN2 high mobility group nucleosomal binding domain 2 0.0175668
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0175552
FAM13A family with sequence similarity 13, member A 0.0173371
UBE2C ubiquitin-conjugating enzyme E2C 0.0173092
AKAP12 A kinase (PRKA) anchor protein 12 0.0172138
RIOK3 RIO kinase 3 0.0169979
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0164159
RPS7 ribosomal protein S7 0.0163819
PNN pinin, desmosome associated protein 0.0163705
ATF4 activating transcription factor 4 0.0163416
RPL10A ribosomal protein L10a 0.0159943
TPX2 TPX2, microtubule-associated 0.015899
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0157937
WASL Wiskott-Aldrich syndrome-like 0.0157334
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0154119
TMF1 TATA element modulatory factor 1 0.0153841
SMAD3 SMAD family member 3 0.0153383
EFCAB14 EF-hand calcium binding domain 14 0.0153177
MACF1 microtubule-actin crosslinking factor 1 0.0151105
RPL35 ribosomal protein L35 0.0151097
BCLAF1 BCL2-associated transcription factor 1 0.0150795
SRRM1 serine/arginine repetitive matrix 1 0.0150402
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma 0.0148907
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0148335
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0147189
RPL12 ribosomal protein L12 0.0145493
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0145303
KDM5C lysine (K)-specific demethylase 5C 0.0144293
LSR lipolysis stimulated lipoprotein receptor 0.0141617
RPS27 ribosomal protein S27 0.0140957
MEA1 male-enhanced antigen 1 0.0139878
NACA nascent polypeptide-associated complex alpha subunit 0.0139868
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0138751
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0138372
EGR1 early growth response 1 0.0138207
HDGF hepatoma-derived growth factor 0.0138062
PABPC1 poly(A) binding protein, cytoplasmic 1 0.013711
EIF4H eukaryotic translation initiation factor 4H 0.0133215
WBP11 WW domain binding protein 11 0.013007
MYH9 myosin, heavy chain 9, non-muscle 0.012995
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0129245
RPLP2 ribosomal protein, large, P2 0.0129025
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0127717
EIF2A eukaryotic translation initiation factor 2A, 65kDa 0.0127151

decreased expression

Symbol Name Standardized Value
GMDS GDP-mannose 4,6-dehydratase -0.189532
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.186713
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.145652
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.114245
LMO7 LIM domain 7 -0.103278
PDIA3 protein disulfide isomerase family A, member 3 -0.0958816
FGFR2 fibroblast growth factor receptor 2 -0.094341
NPSR1 neuropeptide S receptor 1 -0.090413
EMP1 epithelial membrane protein 1 -0.0871217
ANXA2 annexin A2 -0.0865031
PGK1 phosphoglycerate kinase 1 -0.0830656
TPT1 tumor protein, translationally-controlled 1 -0.0813634
CEMIP cell migration inducing protein, hyaluronan binding -0.0802695
MAML2 mastermind-like 2 (Drosophila) -0.0710631
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0692059
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0687758
TMEM123 transmembrane protein 123 -0.0665523
CD2AP CD2-associated protein -0.0635122
AGR2 anterior gradient 2 -0.0633925
RPL35A ribosomal protein L35a -0.0628339
TMC5 transmembrane channel-like 5 -0.0599052
PTPRK protein tyrosine phosphatase, receptor type, K -0.0559113
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0558523
AHR aryl hydrocarbon receptor -0.0543946
FAT1 FAT atypical cadherin 1 -0.0541263
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0538768
TNIK TRAF2 and NCK interacting kinase -0.053532
CANX calnexin -0.0534497
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0505294
CDK6 cyclin-dependent kinase 6 -0.0502683
HLA-E major histocompatibility complex, class I, E -0.0502544
ATF5 activating transcription factor 5 -0.0486656
EHBP1 EH domain binding protein 1 -0.0476522
TMSB10 thymosin beta 10 -0.0475085
RAB1A RAB1A, member RAS oncogene family -0.0471109
ARHGAP32 Rho GTPase activating protein 32 -0.0470544
EPCAM epithelial cell adhesion molecule -0.0470395
RPLP1 ribosomal protein, large, P1 -0.0443775
SH3RF1 SH3 domain containing ring finger 1 -0.0442282
ITGA6 integrin, alpha 6 -0.0437804
SPDYA speedy/RINGO cell cycle regulator family member A -0.0436789
PHF14 PHD finger protein 14 -0.0435508
SLC38A1 solute carrier family 38, member 1 -0.0434613
S100A6 S100 calcium binding protein A6 -0.0434099
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0427954
WDR45B WD repeat domain 45B -0.0416225
IARS1 isoleucyl-tRNA synthetase 1 -0.0415463
RAB7A RAB7A, member RAS oncogene family -0.0412556
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0411845
SAMD12 sterile alpha motif domain containing 12 -0.0411303
RNF213 ring finger protein 213 -0.0408265
MECOM MDS1 and EVI1 complex locus -0.0405395
POF1B premature ovarian failure, 1B -0.0404826
LPP LIM domain containing preferred translocation partner in lipoma -0.0404642
NF1 neurofibromin 1 -0.0404021
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0402871
FOXP1 forkhead box P1 -0.0400276
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0388516
HLA-C major histocompatibility complex, class I, C -0.038549
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0384732
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0381401
MTUS1 microtubule associated tumor suppressor 1 -0.0380714
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0380235
AHNAK AHNAK nucleoprotein -0.0378561
RPS24 ribosomal protein S24 -0.0372691
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.037164
ACTN4 actinin, alpha 4 -0.0370185
DIAPH2 diaphanous-related formin 2 -0.0367443
RUNX1 runt-related transcription factor 1 -0.0360669
SIK3 SIK family kinase 3 -0.0360313
ACACA acetyl-CoA carboxylase alpha -0.0360153
COBL cordon-bleu WH2 repeat protein -0.0358966
RRBP1 ribosome binding protein 1 -0.0358085
AOPEP aminopeptidase O (putative) -0.0354523
KRT8 keratin 8, type II -0.035382
CEMIP2 cell migration inducing hyaluronidase 2 -0.0349957
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0348506
LOC112694756 uncharaterized LOC112694756 -0.0344756
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.034377
S100A10 S100 calcium binding protein A10 -0.0342669
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.034078
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0339257
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0337014
POTEF POTE ankyrin domain family, member F -0.0336148
MSI2 musashi RNA-binding protein 2 -0.033453
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0327189
TCF12 transcription factor 12 -0.0326202
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0323989
FBXO11 F-box protein 11 -0.0322875
KRT18 keratin 18, type I -0.0320195
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0319254
MORF4L2 mortality factor 4 like 2 -0.0318599
BTBD9 BTB (POZ) domain containing 9 -0.0316416
RPL23 ribosomal protein L23 -0.0315063
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0315034
ABLIM1 actin binding LIM protein 1 -0.0313248
CUX1 cut-like homeobox 1 -0.0312093
MCU mitochondrial calcium uniporter -0.0311799
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0311248
PRKCA protein kinase C, alpha -0.0310329