Epirubicin (hydrochloride)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.142366
RPS6 ribosomal protein S6 0.0631018
ENKUR enkurin, TRPC channel interacting protein 0.0538142
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0536156
FLNA filamin A, alpha 0.0535836
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.048454
RPS2 ribosomal protein S2 0.0438236
EEF2 eukaryotic translation elongation factor 2 0.0392905
RPL4 ribosomal protein L4 0.0335048
YBX3 Y box binding protein 3 0.0323298
EEF1G eukaryotic translation elongation factor 1 gamma 0.0304133
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0288485
RPS12 ribosomal protein S12 0.027915
HSPA8 heat shock 70kDa protein 8 0.0264046
CSMD3 CUB and Sushi multiple domains 3 0.0245251
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0240152
TPI1 triosephosphate isomerase 1 0.0237746
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0230226
PTCHD4 patched domain containing 4 0.0227871
TLE4 transducin-like enhancer of split 4 0.0226017
EPHA4 EPH receptor A4 0.0222173
GLS2 glutaminase 2 (liver, mitochondrial) 0.0220096
FTH1 ferritin, heavy polypeptide 1 0.021274
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0210277
WDR43 WD repeat domain 43 0.0208352
FLRT2 fibronectin leucine rich transmembrane protein 2 0.0206713
CCNL1 cyclin L1 0.0202571
RPS19 ribosomal protein S19 0.0202296
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0201143
EIF1 eukaryotic translation initiation factor 1 0.0200559
RPL21 ribosomal protein L21 0.019962
MAST4 microtubule associated serine/threonine kinase family member 4 0.0198559
PGAM4 phosphoglycerate mutase family member 4 0.0197657
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0196308
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0192875
FGFR1 fibroblast growth factor receptor 1 0.0188031
RRM2B ribonucleotide reductase M2 B (TP53 inducible) 0.0180304
POLH polymerase (DNA directed), eta 0.017792
SRRM2 serine/arginine repetitive matrix 2 0.0175228
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0173469
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.017074
TPM3 tropomyosin 3 0.0167247
TENT5A terminal nucleotidyltransferase 5A 0.0166436
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0162617
PLK2 polo-like kinase 2 0.0157484
CSNK1G1 casein kinase 1, gamma 1 0.0157143
XPC xeroderma pigmentosum, complementation group C 0.0151704
TSC22D2 TSC22 domain family, member 2 0.0147187
RACK1 receptor for activated C kinase 1 0.0145737
APLP2 amyloid beta (A4) precursor-like protein 2 0.0144553
DERA deoxyribose-phosphate aldolase (putative) 0.014228
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0141639
RPL37A ribosomal protein L37a 0.0141331
RPS17 ribosomal protein S17 0.0138041
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0137057
SESN1 sestrin 1 0.0135708
ENY2 enhancer of yellow 2 homolog (Drosophila) 0.0134874
PEA15 phosphoprotein enriched in astrocytes 15 0.0134698
FBXO22 F-box protein 22 0.0134216
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0134052
NUP58 nucleoporin 58 0.0133347
TLN1 talin 1 0.0130742
ATF3 activating transcription factor 3 0.0130691
MLEC malectin 0.0130291
EIF4H eukaryotic translation initiation factor 4H 0.0129085
VGF VGF nerve growth factor inducible 0.0125685
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0122524
RO60 Ro60, Y RNA binding protein 0.0120791
PNN pinin, desmosome associated protein 0.0119847
AXL AXL receptor tyrosine kinase 0.0119837
ZMAT3 zinc finger, matrin-type 3 0.0119114
PCBP2 poly(rC) binding protein 2 0.0118978
NFE2L1 nuclear factor, erythroid 2-like 1 0.0118734
ESM1 endothelial cell-specific molecule 1 0.0117984
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0117855
NOPCHAP1 NOP protein chaperone 1 0.0115652
HMGN2 high mobility group nucleosomal binding domain 2 0.0115089
YBX1 Y box binding protein 1 0.0114207
TIGAR TP53 induced glycolysis regulatory phosphatase 0.0113355
NSUN6 NOP2/Sun domain family, member 6 0.0113101
ASTN2 astrotactin 2 0.0112694
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0110613
MYO6 myosin VI 0.0109453
PRRC2B proline-rich coiled-coil 2B 0.0107066
COLEC10 collectin sub-family member 10 (C-type lectin) 0.0106252
PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha 0.0105951
ANKZF1 ankyrin repeat and zinc finger domain containing 1 0.0105797
PPME1 protein phosphatase methylesterase 1 0.0105639
BRD2 bromodomain containing 2 0.010492
E2F7 E2F transcription factor 7 0.0104616
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.0103369
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0102479
SET SET nuclear proto-oncogene 0.0102469
RPL13A ribosomal protein L13a 0.0102345
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0101577
SMTN smoothelin 0.0100287
SNX2 sorting nexin 2 0.00997051
HDAC3 histone deacetylase 3 0.00995245
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.00985557
TM7SF3 transmembrane 7 superfamily member 3 0.00983879

decreased expression

Symbol Name Standardized Value
EFNA5 ephrin-A5 -0.195828
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.174618
GPC6 glypican 6 -0.162114
PRKG1 protein kinase, cGMP-dependent, type I -0.123367
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.121064
EXT1 exostosin glycosyltransferase 1 -0.119774
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.118365
TRIO trio Rho guanine nucleotide exchange factor -0.116018
MMP12 matrix metallopeptidase 12 -0.115255
VIM vimentin -0.114436
PBX3 pre-B-cell leukemia homeobox 3 -0.10374
ASPH aspartate beta-hydroxylase -0.102636
LSAMP limbic system-associated membrane protein -0.101251
PTK2 protein tyrosine kinase 2 -0.0977694
DTNA dystrobrevin, alpha -0.0975766
RUNX1 runt-related transcription factor 1 -0.0897417
AKAP12 A kinase (PRKA) anchor protein 12 -0.0845086
LIMCH1 LIM and calponin homology domains 1 -0.0830753
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0813077
NAV1 neuron navigator 1 -0.079382
PHACTR1 phosphatase and actin regulator 1 -0.0790978
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0788006
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0784803
SAMD3 sterile alpha motif domain containing 3 -0.0764309
KIAA1549L KIAA1549-like -0.0750466
ACTG1 actin gamma 1 -0.074808
DST dystonin -0.0741392
USP34 ubiquitin specific peptidase 34 -0.07048
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0664975
NTM neurotrimin -0.0663086
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0662672
LPP LIM domain containing preferred translocation partner in lipoma -0.0636691
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0635077
AHNAK AHNAK nucleoprotein -0.0633378
LDHA lactate dehydrogenase A -0.061585
CALD1 caldesmon 1 -0.0611658
PTPRG protein tyrosine phosphatase, receptor type, G -0.0576111
FNDC3B fibronectin type III domain containing 3B -0.0561037
SBF2 SET binding factor 2 -0.0559112
FOXP1 forkhead box P1 -0.0541517
PARD3 par-3 family cell polarity regulator -0.0538403
MYO10 myosin X -0.0530927
PTMA prothymosin, alpha -0.0530709
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0530033
SDCCAG8 serologically defined colon cancer antigen 8 -0.0523469
CDK6 cyclin-dependent kinase 6 -0.0521143
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0519332
CDH13 cadherin 13 -0.0511067
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0499674
ZEB1 zinc finger E-box binding homeobox 1 -0.0498949
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0497742
BIRC6 baculoviral IAP repeat containing 6 -0.049273
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0483686
PDE4D phosphodiesterase 4D, cAMP-specific -0.0482871
ERBIN erbb2 interacting protein -0.0482575
TPT1 tumor protein, translationally-controlled 1 -0.0480446
NALF1 NALCN channel auxiliary factor 1 -0.0472527
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0471367
TMSB10 thymosin beta 10 -0.0466495
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0462114
RPL23 ribosomal protein L23 -0.0451047
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0448579
SMYD3 SET and MYND domain containing 3 -0.0443699
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0439371
PGK1 phosphoglycerate kinase 1 -0.0431688
PRKCE protein kinase C, epsilon -0.042891
FMNL2 formin-like 2 -0.0421356
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0415331
ALCAM activated leukocyte cell adhesion molecule -0.0414975
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0413452
RAD21 RAD21 homolog (S. pombe) -0.0408569
CDK14 cyclin-dependent kinase 14 -0.0406938
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0403981
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0403446
VCL vinculin -0.0403396
SAMD4A sterile alpha motif domain containing 4A -0.0402174
SSH2 slingshot protein phosphatase 2 -0.0399054
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0393367
TRPS1 trichorhinophalangeal syndrome I -0.0384828
ANO6 anoctamin 6 -0.0383083
ELL2 elongation factor, RNA polymerase II, 2 -0.0381377
KDM4C lysine (K)-specific demethylase 4C -0.0381243
DIAPH2 diaphanous-related formin 2 -0.0380856
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0380495
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.037912
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0376939
CFAP251 cilia and flagella associated protein 251 -0.0376672
NF1 neurofibromin 1 -0.0374314
MSR1 macrophage scavenger receptor 1 -0.0371424
JMJD1C jumonji domain containing 1C -0.03667
ZNF804A zinc finger protein 804A -0.0365918
TMPRSS15 transmembrane protease, serine 15 -0.0362042
POTEF POTE ankyrin domain family, member F -0.0356603
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0348775
MACF1 microtubule-actin crosslinking factor 1 -0.0345311
MAP4 microtubule-associated protein 4 -0.0341525
TAS2R14 taste receptor, type 2, member 14 -0.034061
ATXN1 ataxin 1 -0.0339523
PTPRD protein tyrosine phosphatase, receptor type, D -0.0338645
RAD51B RAD51 paralog B -0.0338213