Epirubicin (hydrochloride)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.101627
FTH1 ferritin, heavy polypeptide 1 0.0654648
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0535768
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0489893
TXNIP thioredoxin interacting protein 0.047905
RPS2 ribosomal protein S2 0.0403203
FAM13A family with sequence similarity 13, member A 0.0402107
NDRG1 N-myc downstream regulated 1 0.0398463
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0374162
EREG epiregulin 0.0306846
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0272329
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0270642
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0266289
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0262303
ERRFI1 ERBB receptor feedback inhibitor 1 0.0257449
ZFAND3 zinc finger, AN1-type domain 3 0.0256729
KDM6A lysine (K)-specific demethylase 6A 0.024837
VEGFA vascular endothelial growth factor A 0.0245838
HSPA8 heat shock 70kDa protein 8 0.0240337
WAC WW domain containing adaptor with coiled-coil 0.022675
RPL4 ribosomal protein L4 0.0225813
RNF145 ring finger protein 145 0.0223804
KITLG KIT ligand 0.02223
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0217657
CCNY cyclin Y 0.0213498
EEF2 eukaryotic translation elongation factor 2 0.0207641
DDIT4 DNA-damage-inducible transcript 4 0.0207003
MUC13 mucin 13, cell surface associated 0.0195289
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0194925
ANKRD11 ankyrin repeat domain 11 0.0194197
SRRM2 serine/arginine repetitive matrix 2 0.0190063
CCNL1 cyclin L1 0.0184921
PGAM4 phosphoglycerate mutase family member 4 0.0180163
MXI1 MAX interactor 1, dimerization protein 0.0179828
RPS12 ribosomal protein S12 0.0173406
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0172663
GDF15 growth differentiation factor 15 0.0170067
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0164372
UBA6 ubiquitin-like modifier activating enzyme 6 0.0163644
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.016252
KMT2E lysine (K)-specific methyltransferase 2E 0.016218
ZNF292 zinc finger protein 292 0.0160682
RPL21 ribosomal protein L21 0.0158185
DERA deoxyribose-phosphate aldolase (putative) 0.0157932
RSRC2 arginine/serine-rich coiled-coil 2 0.0157795
EHF ets homologous factor 0.0149807
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0147726
TFG TRK-fused gene 0.0144194
CDC50A cell division cycle 50 P4-ATPase accessory subunit A 0.0143759
EEF1G eukaryotic translation elongation factor 1 gamma 0.0142942
DSPP dentin sialophosphoprotein 0.0140121
LENG8 leukocyte receptor cluster (LRC) member 8 0.0139555
MXD1 MAX dimerization protein 1 0.0139244
SUCO SUN domain containing ossification factor 0.0138678
ANKZF1 ankyrin repeat and zinc finger domain containing 1 0.0138167
NCKAP1 NCK-associated protein 1 0.0137833
EIF4H eukaryotic translation initiation factor 4H 0.0136619
RPL3 ribosomal protein L3 0.0136133
TMF1 TATA element modulatory factor 1 0.0135345
RPS6 ribosomal protein S6 0.0133944
RNF19B ring finger protein 19B 0.013171
PSAT1 phosphoserine aminotransferase 1 0.0131043
NBAS neuroblastoma amplified sequence 0.0130842
TENT5A terminal nucleotidyltransferase 5A 0.0130686
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0130535
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0129203
CASZ1 castor zinc finger 1 0.0129052
ATF3 activating transcription factor 3 0.0128908
PCBP2 poly(rC) binding protein 2 0.0128606
HELZ helicase with zinc finger 0.0126095
DNM2 dynamin 2 0.0126093
SESN1 sestrin 1 0.0125238
BHLHE40 basic helix-loop-helix family, member e40 0.0124876
USP3 ubiquitin specific peptidase 3 0.0122696
MED13L mediator complex subunit 13-like 0.012164
BRD4 bromodomain containing 4 0.012063
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0120171
PRPF4B pre-mRNA processing factor 4B 0.0117919
TNS4 tensin 4 0.0115234
SESN2 sestrin 2 0.0112442
NAMPT nicotinamide phosphoribosyltransferase 0.0111405
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0111339
ADAM17 ADAM metallopeptidase domain 17 0.0111041
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0110059
TNIP1 TNFAIP3 interacting protein 1 0.0108864
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0108691
FBXO32 F-box protein 32 0.0108112
PLXNB2 plexin B2 0.0107873
TSC22D2 TSC22 domain family, member 2 0.0107359
FBXO42 F-box protein 42 0.0105374
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 0.0105283
TRA2A transformer 2 alpha homolog (Drosophila) 0.0104719
NUP58 nucleoporin 58 0.0104509
ACBD3 acyl-CoA binding domain containing 3 0.0103653
RIOK3 RIO kinase 3 0.0103453
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0103176
RBM39 RNA binding motif protein 39 0.0102515
SNX2 sorting nexin 2 0.0101634
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.010063
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0100481

decreased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.154954
PTMA prothymosin, alpha -0.123619
NPSR1 neuropeptide S receptor 1 -0.10026
TMSB10 thymosin beta 10 -0.0976956
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0947347
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0895968
MYO1E myosin IE -0.0815455
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.080344
TPT1 tumor protein, translationally-controlled 1 -0.0779558
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0751585
GPHN gephyrin -0.0684483
GMDS GDP-mannose 4,6-dehydratase -0.0674174
ITGA6 integrin, alpha 6 -0.0647186
NALF1 NALCN channel auxiliary factor 1 -0.0618106
ASPH aspartate beta-hydroxylase -0.0596937
LDHA lactate dehydrogenase A -0.0594932
ANTXR2 anthrax toxin receptor 2 -0.0573189
VCL vinculin -0.057181
CEMIP cell migration inducing protein, hyaluronan binding -0.0567242
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0564774
EPCAM epithelial cell adhesion molecule -0.0551674
ANXA2 annexin A2 -0.0528082
AHNAK AHNAK nucleoprotein -0.0518145
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0517479
ACTG1 actin gamma 1 -0.0514867
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0513703
PTPRK protein tyrosine phosphatase, receptor type, K -0.0511301
ALCAM activated leukocyte cell adhesion molecule -0.0507592
GREB1L growth regulation by estrogen in breast cancer-like -0.0484479
EXT1 exostosin glycosyltransferase 1 -0.044853
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0447145
CANX calnexin -0.0438678
RPL35A ribosomal protein L35a -0.0418765
PGK1 phosphoglycerate kinase 1 -0.0417912
ONECUT3 one cut homeobox 3 -0.0414898
RPLP1 ribosomal protein, large, P1 -0.0413494
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0410499
LMO7 LIM domain 7 -0.040796
TPM4 tropomyosin 4 -0.0404235
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0403093
RAB10 RAB10, member RAS oncogene family -0.0382372
CD44 CD44 molecule (Indian blood group) -0.0379765
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0378731
NEBL nebulette -0.0372697
ARHGAP5 Rho GTPase activating protein 5 -0.0369862
PDLIM5 PDZ and LIM domain 5 -0.036828
RPLP0 ribosomal protein, large, P0 -0.0360838
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0340454
RPS24 ribosomal protein S24 -0.0340291
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0337212
PDE4D phosphodiesterase 4D, cAMP-specific -0.0335451
SMYD3 SET and MYND domain containing 3 -0.0335428
PPARG peroxisome proliferator-activated receptor gamma -0.0332028
PATJ PATJ crumbs cell polarity complex component -0.0330977
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0324538
PKP2 plakophilin 2 -0.0324323
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0313801
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0312216
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0310544
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0304682
TRIM2 tripartite motif containing 2 -0.0301161
ANKRD17 ankyrin repeat domain 17 -0.0299513
RPL23 ribosomal protein L23 -0.0284766
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.028309
MACF1 microtubule-actin crosslinking factor 1 -0.0282307
SAMD5 sterile alpha motif domain containing 5 -0.0282038
FOXP1 forkhead box P1 -0.0281489
ACTN4 actinin, alpha 4 -0.0280427
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.027984
LAMA4 laminin, alpha 4 -0.0270212
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0268785
CCSER1 coiled-coil serine-rich protein 1 -0.0268252
PRSS3 protease, serine, 3 -0.0268033
ABR active BCR-related -0.026714
KRT18 keratin 18, type I -0.0259949
CLOCK clock circadian regulator -0.0259643
PKM pyruvate kinase, muscle -0.025959
MT2A metallothionein 2A -0.0259467
POTEF POTE ankyrin domain family, member F -0.0259342
CCND1 cyclin D1 -0.0258302
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0258288
MYO1D myosin ID -0.025532
ABLIM1 actin binding LIM protein 1 -0.0254416
SH3D19 SH3 domain containing 19 -0.0254229
CADPS Ca++-dependent secretion activator -0.0251711
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0251056
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0249849
IER3 immediate early response 3 -0.0248865
S100A6 S100 calcium binding protein A6 -0.0247822
LOC102724023 ES1 protein homolog, mitochondrial -0.0247582
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0247575
DEK DEK proto-oncogene -0.024522
POF1B premature ovarian failure, 1B -0.0243105
PTPRG protein tyrosine phosphatase, receptor type, G -0.0243061
FBXL17 F-box and leucine-rich repeat protein 17 -0.0242744
KDM4C lysine (K)-specific demethylase 4C -0.0241685
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.0240525
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0240216
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0239561
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0238897