Epirubicin (hydrochloride)_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.107683
RUNX1 runt-related transcription factor 1 0.0793988
FTH1 ferritin, heavy polypeptide 1 0.0757017
MT2A metallothionein 2A 0.0728025
MKI67 marker of proliferation Ki-67 0.072375
CES1 carboxylesterase 1 0.0595119
TBC1D22A TBC1 domain family, member 22A 0.0472577
ELL2 elongation factor, RNA polymerase II, 2 0.0469405
RPL4 ribosomal protein L4 0.0421488
ANKRD10 ankyrin repeat domain 10 0.0408859
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0407912
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0392568
RPS3 ribosomal protein S3 0.0373828
NGLY1 N-glycanase 1 0.0367271
LAMB3 laminin, beta 3 0.0365925
RICTOR RPTOR independent companion of MTOR, complex 2 0.0365618
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0352661
RNF145 ring finger protein 145 0.0351397
SLTM SAFB-like, transcription modulator 0.0329411
NDE1 nudE neurodevelopment protein 1 0.032226
AGO2 argonaute RISC catalytic component 2 0.0321433
PNISR PNN-interacting serine/arginine-rich protein 0.0321118
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0301329
PRRC2C proline-rich coiled-coil 2C 0.0293749
KIAA1328 KIAA1328 0.0286161
RPS2 ribosomal protein S2 0.0285254
CAMTA1 calmodulin binding transcription activator 1 0.0278655
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0265884
SCLT1 sodium channel and clathrin linker 1 0.0265756
NPTN neuroplastin 0.0261342
RPS6 ribosomal protein S6 0.0259894
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0255094
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0254291
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0251701
GPATCH2L G patch domain containing 2-like 0.0250913
CENPF centromere protein F, 350/400kDa 0.024833
BRWD3 bromodomain and WD repeat domain containing 3 0.0246415
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.024555
UBE2O ubiquitin-conjugating enzyme E2O 0.0240335
MARF1 meiosis regulator and mRNA stability factor 1 0.0238442
ECT2 epithelial cell transforming 2 0.0235247
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0233851
PUM2 pumilio RNA-binding family member 2 0.0232892
SGO2 shugoshin 2 0.022905
DTNA dystrobrevin, alpha 0.0227699
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0226052
OGA O-GlcNAcase 0.022316
ZC3H11A zinc finger CCCH-type containing 11A 0.021958
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0216527
ZNF292 zinc finger protein 292 0.0216258
PRELID2 PRELI domain containing 2 0.021567
ATP13A3 ATPase type 13A3 0.0215018
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.021378
MIS18BP1 MIS18 binding protein 1 0.0211435
KIAA1217 KIAA1217 0.0211113
HELZ helicase with zinc finger 0.0207157
GLS2 glutaminase 2 (liver, mitochondrial) 0.0204664
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0203309
ZFC3H1 zinc finger, C3H1-type containing 0.0202206
PER1 period circadian clock 1 0.0201974
MYO1B myosin IB 0.020059
CYTH1 cytohesin 1 0.0199186
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0197784
RBM39 RNA binding motif protein 39 0.0197718
BHLHE40 basic helix-loop-helix family, member e40 0.0196227
CKAP2 cytoskeleton associated protein 2 0.0194765
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0194504
UVRAG UV radiation resistance associated 0.0192614
CKAP5 cytoskeleton associated protein 5 0.0192325
ANO6 anoctamin 6 0.0191836
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0190817
RASA2 RAS p21 protein activator 2 0.0188445
SRRM2 serine/arginine repetitive matrix 2 0.0188377
ARL8B ADP-ribosylation factor-like 8B 0.0187211
DSCAM Down syndrome cell adhesion molecule 0.0185213
NEK7 NIMA-related kinase 7 0.018321
ZFAND6 zinc finger, AN1-type domain 6 0.018271
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0181156
CDC73 cell division cycle 73 0.0179616
TFG TRK-fused gene 0.017727
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.017643
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0175644
MYH9 myosin, heavy chain 9, non-muscle 0.0175556
NFE2L2 nuclear factor, erythroid 2-like 2 0.017522
METTL15 methyltransferase like 15 0.0175195
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0174339
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0173636
ADAM17 ADAM metallopeptidase domain 17 0.016915
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0168608
KDM6A lysine (K)-specific demethylase 6A 0.0168206
MCTP1 multiple C2 domains, transmembrane 1 0.0168132
CCNL1 cyclin L1 0.016444
GIGYF2 GRB10 interacting GYF protein 2 0.0163349
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0162117
KIF14 kinesin family member 14 0.0162081
EIF4H eukaryotic translation initiation factor 4H 0.0162014
FRY furry homolog (Drosophila) 0.0161305
ZC3H15 zinc finger CCCH-type containing 15 0.0159932
PAPOLA poly(A) polymerase alpha 0.0159336
RPS8 ribosomal protein S8 0.0158413

decreased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor -0.270721
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.252096
TMSB10 thymosin beta 10 -0.136797
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.12593
ASPH aspartate beta-hydroxylase -0.104046
NDRG1 N-myc downstream regulated 1 -0.0967893
LDHA lactate dehydrogenase A -0.0966493
CAV1 caveolin 1, caveolae protein, 22kDa -0.0955194
PKM pyruvate kinase, muscle -0.0949286
ACTG1 actin gamma 1 -0.090147
LMO7 LIM domain 7 -0.0846206
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0838099
THSD4 thrombospondin, type I, domain containing 4 -0.0833272
PTPRM protein tyrosine phosphatase, receptor type, M -0.0744612
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0710785
MYOF myoferlin -0.0705036
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0691679
ANXA2 annexin A2 -0.0688086
IGFBP3 insulin-like growth factor binding protein 3 -0.0673292
S100A10 S100 calcium binding protein A10 -0.0657877
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0613828
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.060713
KRT7 keratin 7, type II -0.0594322
EGR1 early growth response 1 -0.0592411
CST3 cystatin C -0.0589447
GRAMD1B GRAM domain containing 1B -0.0587179
INTS6 integrator complex subunit 6 -0.0559323
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0546116
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0540706
PDIA3 protein disulfide isomerase family A, member 3 -0.0536916
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0527781
POTEF POTE ankyrin domain family, member F -0.0497566
RNF213 ring finger protein 213 -0.0490326
SCEL sciellin -0.0488203
PTMA prothymosin, alpha -0.0469381
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0462188
SEC31A SEC31 homolog A (S. cerevisiae) -0.0456409
CAV2 caveolin 2 -0.0453675
KRT18 keratin 18, type I -0.0437832
CANX calnexin -0.0435954
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0433031
TPM4 tropomyosin 4 -0.0430903
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0421898
CCND1 cyclin D1 -0.0421544
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0414193
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0386268
IGFBP5 insulin-like growth factor binding protein 5 -0.0381817
FNDC3B fibronectin type III domain containing 3B -0.0378701
CUX1 cut-like homeobox 1 -0.0373129
AHNAK AHNAK nucleoprotein -0.0365269
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0351097
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.034671
MAML3 mastermind-like 3 (Drosophila) -0.0338529
KRT8 keratin 8, type II -0.0332445
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0332109
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0323094
S100A6 S100 calcium binding protein A6 -0.031763
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0310611
CMIP c-Maf inducing protein -0.0310283
AKAP13 A kinase (PRKA) anchor protein 13 -0.0309292
FOXP1 forkhead box P1 -0.0304113
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0302412
ENO1 enolase 1, (alpha) -0.0299335
DSPP dentin sialophosphoprotein -0.0298216
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0298054
SPDYA speedy/RINGO cell cycle regulator family member A -0.029619
TMOD3 tropomodulin 3 (ubiquitous) -0.0291351
HMGA1 high mobility group AT-hook 1 -0.0287036
AGR2 anterior gradient 2 -0.028463
GRB10 growth factor receptor-bound protein 10 -0.0283189
SLC38A2 solute carrier family 38, member 2 -0.0281138
PRKCA protein kinase C, alpha -0.0276334
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0274122
TTC3 tetratricopeptide repeat domain 3 -0.0272815
PARD3 par-3 family cell polarity regulator -0.0272284
NPAS2 neuronal PAS domain protein 2 -0.0272173
AKAP12 A kinase (PRKA) anchor protein 12 -0.0270838
EFNA5 ephrin-A5 -0.0270272
LPP LIM domain containing preferred translocation partner in lipoma -0.0266167
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0265729
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0264396
FLNB filamin B, beta -0.0262488
LOC112694756 uncharaterized LOC112694756 -0.0259768
UGDH UDP-glucose 6-dehydrogenase -0.0258226
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0256791
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0256505
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0255973
PDE8A phosphodiesterase 8A -0.0250519
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0249759
KRT19 keratin 19, type I -0.0248142
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0247571
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0247023
BPTF bromodomain PHD finger transcription factor -0.0246859
RAB10 RAB10, member RAS oncogene family -0.0246125
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.024051
KPNB1 karyopherin (importin) beta 1 -0.0239876
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0239394
GNAS GNAS complex locus -0.0238562
SLC38A1 solute carrier family 38, member 1 -0.0237216
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0236954