Epirubicin (hydrochloride)_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0936925
EIF5B eukaryotic translation initiation factor 5B 0.0594589
WNK1 WNK lysine deficient protein kinase 1 0.0584792
EGFR epidermal growth factor receptor 0.058375
PIBF1 progesterone immunomodulatory binding factor 1 0.0540941
GLIS3 GLIS family zinc finger 3 0.0531781
PRRC2B proline-rich coiled-coil 2B 0.053137
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0515284
EEF1G eukaryotic translation elongation factor 1 gamma 0.0514169
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0500924
TRIO trio Rho guanine nucleotide exchange factor 0.0498093
NFE2L1 nuclear factor, erythroid 2-like 1 0.0485494
GCC2 GRIP and coiled-coil domain containing 2 0.0485138
RPLP1 ribosomal protein, large, P1 0.0477832
GLS2 glutaminase 2 (liver, mitochondrial) 0.0474718
TPM3 tropomyosin 3 0.0472454
FNBP1 formin binding protein 1 0.047243
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0468283
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0464909
LMBR1 limb development membrane protein 1 0.0459765
TRAPPC9 trafficking protein particle complex 9 0.0458514
FNIP1 folliculin interacting protein 1 0.0457218
TCF12 transcription factor 12 0.0455416
RAB7A RAB7A, member RAS oncogene family 0.0453648
NRIP1 nuclear receptor interacting protein 1 0.0448982
SCFD1 sec1 family domain containing 1 0.0448602
RPS20 ribosomal protein S20 0.0448599
CCNL1 cyclin L1 0.0448573
YBX1 Y box binding protein 1 0.0443665
TOP1 topoisomerase (DNA) I 0.0442171
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0438111
TRIM56 tripartite motif containing 56 0.0436272
EMSY EMSY transcriptional repressor, BRCA2 interacting 0.0434318
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0433393
AKAP12 A kinase (PRKA) anchor protein 12 0.0426151
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0424091
NAMPT nicotinamide phosphoribosyltransferase 0.0423805
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0422022
GPHN gephyrin 0.0421494
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0420877
RPS6 ribosomal protein S6 0.0419057
RPS8 ribosomal protein S8 0.0417213
FTH1 ferritin, heavy polypeptide 1 0.0414667
GMDS GDP-mannose 4,6-dehydratase 0.041428
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0407827
KDM4C lysine (K)-specific demethylase 4C 0.0407518
CD44 CD44 molecule (Indian blood group) 0.0407509
ALCAM activated leukocyte cell adhesion molecule 0.0406867
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0403077
STK38 serine/threonine kinase 38 0.0402402
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.039876
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0398254
FRMD5 FERM domain containing 5 0.0397865
SLC38A1 solute carrier family 38, member 1 0.0396742
GPC6 glypican 6 0.0396175
PTPRG protein tyrosine phosphatase, receptor type, G 0.0395272
WTAP Wilms tumor 1 associated protein 0.0391741
CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 0.0390932
CSNK1A1 casein kinase 1, alpha 1 0.0390265
ENSA endosulfine alpha 0.0389987
RAD21 RAD21 homolog (S. pombe) 0.0389216
FBXW11 F-box and WD repeat domain containing 11 0.038897
ETF1 eukaryotic translation termination factor 1 0.0385484
TENT5A terminal nucleotidyltransferase 5A 0.0383659
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0382888
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0382772
ZNF207 zinc finger protein 207 0.0382595
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0379662
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.0374222
PPHLN1 periphilin 1 0.0373628
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0372485
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0370396
SSBP2 single-stranded DNA binding protein 2 0.0365708
SETX senataxin 0.0363898
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0362209
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0356958
PRKCA protein kinase C, alpha 0.0356849
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0354742
RPL12 ribosomal protein L12 0.0352696
SASH1 SAM and SH3 domain containing 1 0.0352291
RPS5 ribosomal protein S5 0.0352139
PODXL podocalyxin-like 0.0350354
HYOU1 hypoxia up-regulated 1 0.0347824
VCP valosin containing protein 0.0346258
FAM120B family with sequence similarity 120B 0.0345333
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0345217
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.0344797
EGR1 early growth response 1 0.0342731
NAP1L1 nucleosome assembly protein 1-like 1 0.0340837
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0338492
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0336598
LRP6 low density lipoprotein receptor-related protein 6 0.0336466
FLNA filamin A, alpha 0.0335739
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0335288
SYAP1 synapse associated protein 1 0.0334672
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0334319
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0333382
NALF1 NALCN channel auxiliary factor 1 0.0333273
TBC1D15 TBC1 domain family, member 15 0.0330532
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0329695

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.193815
GRB10 growth factor receptor-bound protein 10 -0.162559
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.160557
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.137612
NPEPPS aminopeptidase puromycin sensitive -0.130005
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.124448
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.123231
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.121585
LMO7 LIM domain 7 -0.116901
ANXA2 annexin A2 -0.114237
DSCAM Down syndrome cell adhesion molecule -0.103742
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.101466
LAMB3 laminin, beta 3 -0.0972283
PARD3 par-3 family cell polarity regulator -0.0960511
FN1 fibronectin 1 -0.0929839
MYO1E myosin IE -0.0870565
NDRG1 N-myc downstream regulated 1 -0.0840067
NEBL nebulette -0.0820074
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.081261
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0805288
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0775527
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0754267
AHNAK AHNAK nucleoprotein -0.0752405
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.068795
BACE2 beta-site APP-cleaving enzyme 2 -0.0670856
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0648669
LOC112694756 uncharaterized LOC112694756 -0.0643351
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0642399
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0638217
GOLGB1 golgin B1 -0.0636668
KRT17 keratin 17, type I -0.061997
SAMD4A sterile alpha motif domain containing 4A -0.0608955
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0567289
AKAP13 A kinase (PRKA) anchor protein 13 -0.0550612
WARS1 tryptophanyl-tRNA synthetase 1 -0.0549659
BTG1 B-cell translocation gene 1, anti-proliferative -0.0544692
DOCK5 dedicator of cytokinesis 5 -0.0542933
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0540961
ATOSA atos homolog A -0.0540875
ABHD17C abhydrolase domain containing 17C -0.0532585
KIAA1217 KIAA1217 -0.0532554
DSG2 desmoglein 2 -0.0528017
RIGI RNA sensor RIG-I -0.0521333
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0520187
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0514694
ZFAND3 zinc finger, AN1-type domain 3 -0.0503089
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0499685
SMYD3 SET and MYND domain containing 3 -0.0497562
USP53 ubiquitin specific peptidase 53 -0.0492712
ZMYM2 zinc finger, MYM-type 2 -0.0488808
DOCK4 dedicator of cytokinesis 4 -0.0478622
SVIL supervillin -0.0466029
ANKRD17 ankyrin repeat domain 17 -0.0460218
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0449404
WDR45B WD repeat domain 45B -0.0445637
LMAN1 lectin, mannose-binding, 1 -0.0439523
MAPK6 mitogen-activated protein kinase 6 -0.0432953
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.042826
ITCH itchy E3 ubiquitin protein ligase -0.0425391
SAMD9 sterile alpha motif domain containing 9 -0.0423614
RUFY1 RUN and FYVE domain containing 1 -0.0422237
KLF5 Kruppel-like factor 5 (intestinal) -0.0419903
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0417238
ANKRD11 ankyrin repeat domain 11 -0.0416786
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0414823
AUTS2 autism susceptibility candidate 2 -0.0405767
LNPEP leucyl/cystinyl aminopeptidase -0.0404343
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0402863
AKAP9 A kinase (PRKA) anchor protein 9 -0.0399561
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0398511
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0396566
MYOF myoferlin -0.0394797
PPARD peroxisome proliferator-activated receptor delta -0.0392387
RORA RAR-related orphan receptor A -0.0387654
UBE2H ubiquitin-conjugating enzyme E2H -0.0386414
FNDC3A fibronectin type III domain containing 3A -0.0380263
SETD5 SET domain containing 5 -0.0378089
TRA2A transformer 2 alpha homolog (Drosophila) -0.0378018
CEP350 centrosomal protein 350kDa -0.0376419
ARHGAP26 Rho GTPase activating protein 26 -0.0372869
STAG2 stromal antigen 2 -0.0369545
MYO5A myosin VA (heavy chain 12, myoxin) -0.0368567
TANK TRAF family member-associated NFKB activator -0.0366874
AGO2 argonaute RISC catalytic component 2 -0.0362565
TXNIP thioredoxin interacting protein -0.0362225
F3 coagulation factor III (thromboplastin, tissue factor) -0.0358764
LDHA lactate dehydrogenase A -0.0357754
MTSS1 metastasis suppressor 1 -0.03548
ENO1 enolase 1, (alpha) -0.0352745
ZNF638 zinc finger protein 638 -0.0346576
HOOK3 hook microtubule-tethering protein 3 -0.0344297
AFF4 AF4/FMR2 family, member 4 -0.0341403
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0341112
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.033251
SAR1A secretion associated, Ras related GTPase 1A -0.0330354
IGFBP3 insulin-like growth factor binding protein 3 -0.0328172
BMAL2 basic helix-loop-helix ARNT like 2 -0.0327705
CDCP1 CUB domain containing protein 1 -0.0325715
MBD5 methyl-CpG binding domain protein 5 -0.0324646
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0319796