Epirubicin (hydrochloride)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.0901121
EFNA5 ephrin-A5 0.0687904
RPS2 ribosomal protein S2 0.0682432
FLNA filamin A, alpha 0.0679142
RPS12 ribosomal protein S12 0.0678442
MYH9 myosin, heavy chain 9, non-muscle 0.0643759
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0636078
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0605205
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0591957
FTH1 ferritin, heavy polypeptide 1 0.056336
EEF2 eukaryotic translation elongation factor 2 0.0505915
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0497805
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.048278
NAP1L1 nucleosome assembly protein 1-like 1 0.0448692
AKAP12 A kinase (PRKA) anchor protein 12 0.0410071
ERRFI1 ERBB receptor feedback inhibitor 1 0.0404599
SFTPA2 surfactant protein A2 0.0392533
RPS8 ribosomal protein S8 0.0387448
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0385396
ICAM1 intercellular adhesion molecule 1 0.0374732
CADM1 cell adhesion molecule 1 0.0374413
RPS3 ribosomal protein S3 0.0372238
RPL4 ribosomal protein L4 0.03662
LAMP2 lysosomal-associated membrane protein 2 0.0354732
TNIP1 TNFAIP3 interacting protein 1 0.0350809
HSPA8 heat shock 70kDa protein 8 0.034972
RPL37A ribosomal protein L37a 0.0338783
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0332139
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0325521
HLA-A major histocompatibility complex, class I, A 0.0317247
DIAPH3 diaphanous-related formin 3 0.0311178
EIF1 eukaryotic translation initiation factor 1 0.0309229
EEF1G eukaryotic translation elongation factor 1 gamma 0.0307841
PPP4R4 protein phosphatase 4, regulatory subunit 4 0.0303313
SMAD3 SMAD family member 3 0.0302564
RPL11 ribosomal protein L11 0.0302343
CDH13 cadherin 13 0.0300583
RACK1 receptor for activated C kinase 1 0.02962
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0292707
TGFBI transforming growth factor, beta-induced, 68kDa 0.0291661
INHBA inhibin, beta A 0.0290004
PTPRK protein tyrosine phosphatase, receptor type, K 0.0272921
SRGN serglycin 0.0271438
TPM3 tropomyosin 3 0.0267719
NFE2L1 nuclear factor, erythroid 2-like 1 0.0267625
RPS17 ribosomal protein S17 0.0265522
CALR calreticulin 0.0263746
PRRC2C proline-rich coiled-coil 2C 0.0259828
TUBA1B tubulin, alpha 1b 0.0257383
PEA15 phosphoprotein enriched in astrocytes 15 0.0252005
EIF4H eukaryotic translation initiation factor 4H 0.0251414
RPS4X ribosomal protein S4, X-linked 0.0250471
RPL26 ribosomal protein L26 0.0249811
RPL12 ribosomal protein L12 0.0242762
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0242725
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0235631
EGFR epidermal growth factor receptor 0.0235577
ANLN anillin, actin binding protein 0.023309
STC2 stanniocalcin 2 0.0226576
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0224171
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.022281
ALCAM activated leukocyte cell adhesion molecule 0.0213891
PCBP2 poly(rC) binding protein 2 0.0213218
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0212828
CENPP centromere protein P 0.0212137
TPI1 triosephosphate isomerase 1 0.0206277
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0204374
SDC4 syndecan 4 0.0202624
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0201187
RPL10A ribosomal protein L10a 0.0200279
HELLS helicase, lymphoid-specific 0.0197666
DTNA dystrobrevin, alpha 0.0196605
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0195173
HMGN2 high mobility group nucleosomal binding domain 2 0.0194617
XPO1 exportin 1 0.019267
HLA-B major histocompatibility complex, class I, B 0.0187669
MACF1 microtubule-actin crosslinking factor 1 0.0186565
YBX1 Y box binding protein 1 0.017984
MYLK myosin light chain kinase 0.0178331
STC1 stanniocalcin 1 0.0177402
PRKCA protein kinase C, alpha 0.0177127
AXL AXL receptor tyrosine kinase 0.0176052
GREM1 gremlin 1, DAN family BMP antagonist 0.0175171
NONO non-POU domain containing, octamer-binding 0.0173804
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0173634
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0173452
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.017258
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.017185
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0171692
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0170773
ARL15 ADP-ribosylation factor-like 15 0.0170684
MXI1 MAX interactor 1, dimerization protein 0.0169326
UTRN utrophin 0.0168583
BRCA1 breast cancer 1, early onset 0.0167782
PGAM4 phosphoglycerate mutase family member 4 0.0167546
KDM5C lysine (K)-specific demethylase 5C 0.0164069
FGFR1 fibroblast growth factor receptor 1 0.0163986
RPL21 ribosomal protein L21 0.0163877
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0163656
TBC1D5 TBC1 domain family, member 5 0.0161767

decreased expression

Symbol Name Standardized Value
SOD2 superoxide dismutase 2, mitochondrial -0.28712
COL6A3 collagen, type VI, alpha 3 -0.111409
VCL vinculin -0.107099
IGFBP3 insulin-like growth factor binding protein 3 -0.104939
VIM vimentin -0.104422
PGK1 phosphoglycerate kinase 1 -0.0913498
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0881927
BICC1 BicC family RNA binding protein 1 -0.0858436
UGCG UDP-glucose ceramide glucosyltransferase -0.075528
VCAN versican -0.0752272
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0748686
IER3 immediate early response 3 -0.0745706
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0734513
FN1 fibronectin 1 -0.0683985
EXT1 exostosin glycosyltransferase 1 -0.0611739
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0577081
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.054476
PDE10A phosphodiesterase 10A -0.0541953
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0536671
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0528481
TRIO trio Rho guanine nucleotide exchange factor -0.0526098
NDRG1 N-myc downstream regulated 1 -0.0518796
ELL2 elongation factor, RNA polymerase II, 2 -0.0504482
LDHA lactate dehydrogenase A -0.0497922
VEGFA vascular endothelial growth factor A -0.0490654
TNS3 tensin 3 -0.0453252
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0452166
NABP1 nucleic acid binding protein 1 -0.044355
GLIS3 GLIS family zinc finger 3 -0.0442915
ERBIN erbb2 interacting protein -0.0438049
GPC6 glypican 6 -0.0434535
PPARD peroxisome proliferator-activated receptor delta -0.0432838
PLPP6 phospholipid phosphatase 6 -0.0424778
DIAPH2 diaphanous-related formin 2 -0.041308
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0401208
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0396839
JMJD1C jumonji domain containing 1C -0.0387826
SBF2 SET binding factor 2 -0.0385797
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0367154
SLC38A2 solute carrier family 38, member 2 -0.0363869
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0361793
BTG1 B-cell translocation gene 1, anti-proliferative -0.0357777
MX1 MX dynamin-like GTPase 1 -0.0349237
VMP1 vacuole membrane protein 1 -0.034889
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0343096
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0343092
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.034141
HDAC9 histone deacetylase 9 -0.0340034
FRMD4A FERM domain containing 4A -0.0338163
RAI14 retinoic acid induced 14 -0.0337951
ADM adrenomedullin -0.0337274
IFI16 interferon, gamma-inducible protein 16 -0.0336933
LPP LIM domain containing preferred translocation partner in lipoma -0.0326746
ZNF292 zinc finger protein 292 -0.0319069
SP100 SP100 nuclear antigen -0.0315369
FNDC3B fibronectin type III domain containing 3B -0.0314834
RPS24 ribosomal protein S24 -0.0314779
AHNAK AHNAK nucleoprotein -0.031281
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0312714
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0308096
PALLD palladin, cytoskeletal associated protein -0.0306239
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0305298
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0300446
FOXO3 forkhead box O3 -0.029842
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0297473
FLNB filamin B, beta -0.0297319
ATXN1 ataxin 1 -0.029493
RIGI RNA sensor RIG-I -0.0291888
TPM4 tropomyosin 4 -0.0287651
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0285495
DST dystonin -0.0283875
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0283502
USP9X ubiquitin specific peptidase 9, X-linked -0.028323
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0277839
SETD5 SET domain containing 5 -0.027641
MMP12 matrix metallopeptidase 12 -0.0273478
KMT2E lysine (K)-specific methyltransferase 2E -0.0270954
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0270787
RAB7A RAB7A, member RAS oncogene family -0.0266811
NAV2 neuron navigator 2 -0.0266591
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0265051
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0264951
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0264234
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0262321
MYOF myoferlin -0.0261155
FAM20C family with sequence similarity 20, member C -0.0260795
PLIN2 perilipin 2 -0.0260077
TXNIP thioredoxin interacting protein -0.0258058
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0257129
KDM3A lysine (K)-specific demethylase 3A -0.025656
AGTPBP1 ATP/GTP binding protein 1 -0.0256039
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0251269
TPT1 tumor protein, translationally-controlled 1 -0.024951
NPEPPS aminopeptidase puromycin sensitive -0.0249072
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0248329
FBXL2 F-box and leucine-rich repeat protein 2 -0.0247984
DLG1 discs, large homolog 1 (Drosophila) -0.0246788
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0245895
SMAD2 SMAD family member 2 -0.0244414
ZNF207 zinc finger protein 207 -0.0243938