Epirubicin (hydrochloride)_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Epirubicin (hydrochloride) perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Epirubicin (hydrochloride)_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.162544
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0890758
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0859954
RPS6 ribosomal protein S6 0.076514
HSPA8 heat shock 70kDa protein 8 0.0663729
VGF VGF nerve growth factor inducible 0.0621849
UBE2C ubiquitin-conjugating enzyme E2C 0.0601541
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0586397
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.056209
BHLHE40 basic helix-loop-helix family, member e40 0.0535641
CCNL1 cyclin L1 0.0520104
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.05098
RPL4 ribosomal protein L4 0.0505715
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0461935
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0459181
FLNA filamin A, alpha 0.0445536
ZFAND3 zinc finger, AN1-type domain 3 0.0432842
EEF2 eukaryotic translation elongation factor 2 0.0428347
LENG8 leukocyte receptor cluster (LRC) member 8 0.0386355
SDC4 syndecan 4 0.0362358
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0352109
ZNF292 zinc finger protein 292 0.0344803
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0339876
EIF1 eukaryotic translation initiation factor 1 0.0336282
TRA2A transformer 2 alpha homolog (Drosophila) 0.0331892
RPL18 ribosomal protein L18 0.0324154
IFRD1 interferon-related developmental regulator 1 0.032019
PCBP2 poly(rC) binding protein 2 0.0314956
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0310737
SRPK2 SRSF protein kinase 2 0.030767
EEF1G eukaryotic translation elongation factor 1 gamma 0.0304384
ARHGAP32 Rho GTPase activating protein 32 0.0302027
RPS2 ribosomal protein S2 0.0301436
PTPRJ protein tyrosine phosphatase, receptor type, J 0.029751
ARL8B ADP-ribosylation factor-like 8B 0.0291912
VMP1 vacuole membrane protein 1 0.0275646
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0271994
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0270565
CAPN5 calpain 5 0.0266126
RPS12 ribosomal protein S12 0.0262775
ANKRD11 ankyrin repeat domain 11 0.0261792
AKAP12 A kinase (PRKA) anchor protein 12 0.0255008
TNIP1 TNFAIP3 interacting protein 1 0.0252672
BCLAF1 BCL2-associated transcription factor 1 0.0251745
RBM39 RNA binding motif protein 39 0.0249947
KIAA1671 KIAA1671 0.0247952
SRRM2 serine/arginine repetitive matrix 2 0.0247648
TUBA1B tubulin, alpha 1b 0.024611
KDM3A lysine (K)-specific demethylase 3A 0.0245962
WAC WW domain containing adaptor with coiled-coil 0.0245586
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0244889
LSR lipolysis stimulated lipoprotein receptor 0.023863
SMAD3 SMAD family member 3 0.0238317
PRRC2B proline-rich coiled-coil 2B 0.0238291
EIF4H eukaryotic translation initiation factor 4H 0.0238119
EGR1 early growth response 1 0.0236467
LMTK2 lemur tyrosine kinase 2 0.023404
NCOA3 nuclear receptor coactivator 3 0.0233023
GADD45B growth arrest and DNA-damage-inducible, beta 0.0231939
RNF145 ring finger protein 145 0.0230948
WNK1 WNK lysine deficient protein kinase 1 0.0229557
ANKZF1 ankyrin repeat and zinc finger domain containing 1 0.0229184
MAT2A methionine adenosyltransferase II, alpha 0.0227642
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.0227108
PGAM4 phosphoglycerate mutase family member 4 0.0226504
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0225689
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0224607
EWSR1 EWS RNA-binding protein 1 0.0224022
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0223726
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0222158
SRRM1 serine/arginine repetitive matrix 1 0.0214795
MXD1 MAX dimerization protein 1 0.021406
RIOK3 RIO kinase 3 0.0212286
MYO10 myosin X 0.0211724
NDRG1 N-myc downstream regulated 1 0.0210477
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) 0.0210013
NFE2L1 nuclear factor, erythroid 2-like 1 0.020904
HMGN2 high mobility group nucleosomal binding domain 2 0.0205418
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0202453
USP3 ubiquitin specific peptidase 3 0.0201246
SFTPA2 surfactant protein A2 0.0196729
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0196726
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 0.0195064
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0192632
ERRFI1 ERBB receptor feedback inhibitor 1 0.0190407
TGM2 transglutaminase 2 0.0187601
RPS17 ribosomal protein S17 0.018735
CLDN4 claudin 4 0.0187021
CTBP2 C-terminal binding protein 2 0.0186487
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0186428
MACF1 microtubule-actin crosslinking factor 1 0.0186414
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.01863
CCNY cyclin Y 0.0183317
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0178571
RPS3 ribosomal protein S3 0.0178533
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.01771
IPO7 importin 7 0.0176578
MYO18A myosin XVIIIA 0.0176312
KDM5C lysine (K)-specific demethylase 5C 0.0175787
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.0174299

decreased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.145259
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0906284
MAML2 mastermind-like 2 (Drosophila) -0.0747044
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0678278
ACTN4 actinin, alpha 4 -0.0642064
PTMA prothymosin, alpha -0.0611807
CANX calnexin -0.0604177
KDM7A lysine (K)-specific demethylase 7A -0.0596033
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0580221
FAT1 FAT atypical cadherin 1 -0.057945
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.05732
GOLGA4 golgin A4 -0.0569656
EPCAM epithelial cell adhesion molecule -0.0533617
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0529964
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0523724
ADNP activity-dependent neuroprotector homeobox -0.0522639
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0505628
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0504328
RNF43 ring finger protein 43 -0.0489074
NCEH1 neutral cholesterol ester hydrolase 1 -0.0487372
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0472494
CALU calumenin -0.0472149
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0470898
MACC1 metastasis associated in colon cancer 1 -0.0467379
PKP4 plakophilin 4 -0.0462708
CD46 CD46 molecule, complement regulatory protein -0.04585
CST3 cystatin C -0.0457412
RAD21 RAD21 homolog (S. pombe) -0.0454178
PDIA3 protein disulfide isomerase family A, member 3 -0.0453249
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0443413
USP34 ubiquitin specific peptidase 34 -0.0435346
TPM4 tropomyosin 4 -0.0433346
CEMIP cell migration inducing protein, hyaluronan binding -0.0430649
RPL35A ribosomal protein L35a -0.0424608
ARHGAP5 Rho GTPase activating protein 5 -0.0421673
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0420299
GSK3B glycogen synthase kinase 3 beta -0.0409716
SDK1 sidekick cell adhesion molecule 1 -0.0395482
RPL23 ribosomal protein L23 -0.0384368
MBNL1 muscleblind-like splicing regulator 1 -0.038341
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0381112
RPS21 ribosomal protein S21 -0.0375699
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0372761
CCND1 cyclin D1 -0.0367949
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0363136
STK4 serine/threonine kinase 4 -0.0362575
PHF14 PHD finger protein 14 -0.0361512
GPSM2 G-protein signaling modulator 2 -0.0360351
CDCP1 CUB domain containing protein 1 -0.0353543
HM13 histocompatibility (minor) 13 -0.0350635
ESYT2 extended synaptotagmin-like protein 2 -0.0349853
RAB7A RAB7A, member RAS oncogene family -0.0345885
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.034274
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0338169
CENPF centromere protein F, 350/400kDa -0.0336213
TMSB10 thymosin beta 10 -0.0334766
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0333969
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0330268
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0328522
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like -0.0324535
PERP PERP, TP53 apoptosis effector -0.0324383
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.032249
SOX4 SRY (sex determining region Y)-box 4 -0.0321941
RPS24 ribosomal protein S24 -0.0321041
EHBP1 EH domain binding protein 1 -0.0317817
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0316379
LDHA lactate dehydrogenase A -0.0313159
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0312546
CDK13 cyclin-dependent kinase 13 -0.0311984
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0307583
ANXA2 annexin A2 -0.0305281
TAS2R14 taste receptor, type 2, member 14 -0.0304583
KRT18 keratin 18, type I -0.0303994
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0303503
DIAPH1 diaphanous-related formin 1 -0.0303473
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0303221
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0296443
DACH1 dachshund family transcription factor 1 -0.0292472
DSCAM Down syndrome cell adhesion molecule -0.0291359
NRF1 nuclear respiratory factor 1 -0.0288988
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.028677
TPT1 tumor protein, translationally-controlled 1 -0.0285744
PLSCR1 phospholipid scramblase 1 -0.0284378
SVIL supervillin -0.0280326
ITGA6 integrin, alpha 6 -0.0278064
NEBL nebulette -0.027785
BCL2L1 BCL2-like 1 -0.0276961
ZMYND8 zinc finger, MYND-type containing 8 -0.0272857
ZBTB20 zinc finger and BTB domain containing 20 -0.0271947
SMC4 structural maintenance of chromosomes 4 -0.0270663
PCSK5 proprotein convertase subtilisin/kexin type 5 -0.0268114
PTEN phosphatase and tensin homolog -0.0267719
VCL vinculin -0.0266646
FAM3C family with sequence similarity 3, member C -0.0266237
POTEF POTE ankyrin domain family, member F -0.0266204
UBAP2 ubiquitin associated protein 2 -0.0265801
UBP1 upstream binding protein 1 (LBP-1a) -0.0265378
XRN2 5'-3' exoribonuclease 2 -0.0265162
TLK1 tousled-like kinase 1 -0.0260365
BPTF bromodomain PHD finger transcription factor -0.025828