Erdafitinib _LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erdafitinib perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erdafitinib _LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.129923
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.110466
LDHA lactate dehydrogenase A 0.0876955
EXT1 exostosin glycosyltransferase 1 0.0742785
EEF2 eukaryotic translation elongation factor 2 0.0742594
MYH9 myosin, heavy chain 9, non-muscle 0.0629549
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0586116
ASPH aspartate beta-hydroxylase 0.0576694
ENO1 enolase 1, (alpha) 0.057141
MCL1 myeloid cell leukemia 1 0.0558097
NDRG1 N-myc downstream regulated 1 0.054979
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0525688
FMNL2 formin-like 2 0.0517613
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.050276
NALF1 NALCN channel auxiliary factor 1 0.0502416
HSPA8 heat shock 70kDa protein 8 0.0486177
RPL23 ribosomal protein L23 0.0457267
BACE2 beta-site APP-cleaving enzyme 2 0.0447624
TPM3 tropomyosin 3 0.0439204
PKM pyruvate kinase, muscle 0.04233
RPS2 ribosomal protein S2 0.0415641
VIM vimentin 0.0410122
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0407877
RPL7 ribosomal protein L7 0.0405774
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0403176
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0398209
PTPRG protein tyrosine phosphatase, receptor type, G 0.0383292
PDE4D phosphodiesterase 4D, cAMP-specific 0.0379049
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0377713
PCBP2 poly(rC) binding protein 2 0.0363314
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0355853
RPS12 ribosomal protein S12 0.0354307
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0348596
ITGA6 integrin, alpha 6 0.0344679
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0333123
POTEF POTE ankyrin domain family, member F 0.0331385
SET SET nuclear proto-oncogene 0.0329943
RPS8 ribosomal protein S8 0.0313248
APLP2 amyloid beta (A4) precursor-like protein 2 0.0310022
MKI67 marker of proliferation Ki-67 0.0308612
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0287035
YBX1 Y box binding protein 1 0.0276698
RPL3 ribosomal protein L3 0.0266719
RPS4X ribosomal protein S4, X-linked 0.026668
FOXP1 forkhead box P1 0.0261715
EGR1 early growth response 1 0.026134
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0260148
EEF1G eukaryotic translation elongation factor 1 gamma 0.0256625
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0255105
CENPF centromere protein F, 350/400kDa 0.0251424
RPL30 ribosomal protein L30 0.025123
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0250085
RACK1 receptor for activated C kinase 1 0.024097
OCA2 oculocutaneous albinism II 0.0240842
RPS17 ribosomal protein S17 0.0237634
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0236234
ARFGEF3 ARFGEF family member 3 0.0227082
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0226034
CD44 CD44 molecule (Indian blood group) 0.0222812
IPO7 importin 7 0.0222774
SFTPA2 surfactant protein A2 0.0220291
HMGA2 high mobility group AT-hook 2 0.0218539
RPLP0 ribosomal protein, large, P0 0.0217189
SPIRE1 spire-type actin nucleation factor 1 0.0216572
ZSWIM6 zinc finger, SWIM-type containing 6 0.0216561
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0216072
NAV1 neuron navigator 1 0.021443
PDIA6 protein disulfide isomerase family A, member 6 0.0213971
FLNA filamin A, alpha 0.0213714
SDCCAG8 serologically defined colon cancer antigen 8 0.0210293
INTS6 integrator complex subunit 6 0.0208165
NCOR2 nuclear receptor corepressor 2 0.0206921
LINGO2 leucine rich repeat and Ig domain containing 2 0.0205621
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0203763
LOC102724023 ES1 protein homolog, mitochondrial 0.0203224
MAN1A2 mannosidase, alpha, class 1A, member 2 0.0202469
SCRN1 secernin 1 0.02013
RPS27 ribosomal protein S27 0.0201222
STC1 stanniocalcin 1 0.020036
PTPRD protein tyrosine phosphatase, receptor type, D 0.0198327
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0195976
RAD51B RAD51 paralog B 0.0195861
FTH1 ferritin, heavy polypeptide 1 0.0194756
SMC4 structural maintenance of chromosomes 4 0.0192933
FOSL1 FOS-like antigen 1 0.0192176
CCDC80 coiled-coil domain containing 80 0.0191469
RPS7 ribosomal protein S7 0.0191353
EGFR epidermal growth factor receptor 0.0189157
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0187063
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0183345
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0180847
PCDH11X protocadherin 11 X-linked 0.0180085
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0178337
ADGRB3 adhesion G protein-coupled receptor B3 0.0176177
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0173441
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0169063
KTN1 kinectin 1 (kinesin receptor) 0.0167319
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0167182
GOLGB1 golgin B1 0.0166361
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0166082

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.153027
MMP12 matrix metallopeptidase 12 -0.118854
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0725977
KDM3A lysine (K)-specific demethylase 3A -0.0670306
TPT1 tumor protein, translationally-controlled 1 -0.055231
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0517947
ENKUR enkurin, TRPC channel interacting protein -0.0498598
RBM39 RNA binding motif protein 39 -0.0498352
PTMA prothymosin, alpha -0.0485813
PTK2 protein tyrosine kinase 2 -0.0455512
WSB1 WD repeat and SOCS box containing 1 -0.0453675
CD109 CD109 molecule -0.0443243
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0442764
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0442194
PARD3 par-3 family cell polarity regulator -0.0439083
ACTG1 actin gamma 1 -0.0414492
ZNF292 zinc finger protein 292 -0.0405116
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0404867
SPAG9 sperm associated antigen 9 -0.040093
ANXA2 annexin A2 -0.0394796
ZFAND3 zinc finger, AN1-type domain 3 -0.0387332
TMSB10 thymosin beta 10 -0.0369935
CDK17 cyclin-dependent kinase 17 -0.0369829
HAS2 hyaluronan synthase 2 -0.0367667
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0362604
QKI QKI, KH domain containing, RNA binding -0.0360991
WDR45B WD repeat domain 45B -0.0360623
PUM2 pumilio RNA-binding family member 2 -0.0356577
PRKG1 protein kinase, cGMP-dependent, type I -0.0353809
NF1 neurofibromin 1 -0.03395
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0338305
WDR43 WD repeat domain 43 -0.0335401
ADAM9 ADAM metallopeptidase domain 9 -0.0333516
YBX3 Y box binding protein 3 -0.0321575
ATP13A3 ATPase type 13A3 -0.0319665
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0314894
UGCG UDP-glucose ceramide glucosyltransferase -0.0312055
TLE4 transducin-like enhancer of split 4 -0.0310744
NUP58 nucleoporin 58 -0.0303853
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0300919
PNISR PNN-interacting serine/arginine-rich protein -0.0300351
MARCHF6 membrane associated ring-CH-type finger 6 -0.0299091
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0285542
USP3 ubiquitin specific peptidase 3 -0.0283623
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0278502
THOC2 THO complex 2 -0.0275036
RNF145 ring finger protein 145 -0.0271367
RAB1A RAB1A, member RAS oncogene family -0.0270921
MED13L mediator complex subunit 13-like -0.0270792
NAMPT nicotinamide phosphoribosyltransferase -0.0268085
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0267917
BRWD1 bromodomain and WD repeat domain containing 1 -0.026634
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0264844
STRN3 striatin, calmodulin binding protein 3 -0.0263157
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0262597
HDAC9 histone deacetylase 9 -0.025964
HELZ helicase with zinc finger -0.0258937
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0255367
GNAS GNAS complex locus -0.0254228
RASA2 RAS p21 protein activator 2 -0.0251873
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0251647
PHACTR1 phosphatase and actin regulator 1 -0.0248573
CAVIN1 caveolae associated protein 1 -0.0247865
NTM neurotrimin -0.0245731
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 -0.0242408
RPS24 ribosomal protein S24 -0.0242345
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0240415
BRWD3 bromodomain and WD repeat domain containing 3 -0.0240355
TMEM263 transmembrane protein 263 -0.0240253
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0239657
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0235918
NOP58 NOP58 ribonucleoprotein -0.0233869
BIRC6 baculoviral IAP repeat containing 6 -0.0232407
ANKRD28 ankyrin repeat domain 28 -0.0230863
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0230471
POU2F1 POU class 2 homeobox 1 -0.0230007
TRIO trio Rho guanine nucleotide exchange factor -0.0228346
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0228162
WAC WW domain containing adaptor with coiled-coil -0.0228005
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0226523
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0224891
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0224383
VDAC1 voltage-dependent anion channel 1 -0.0223884
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0223647
KMT2C lysine (K)-specific methyltransferase 2C -0.0223491
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0222733
AKAP12 A kinase (PRKA) anchor protein 12 -0.022145
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0220997
RTN4 reticulon 4 -0.0219566
SBF2 SET binding factor 2 -0.0219075
FAM193A family with sequence similarity 193, member A -0.0218631
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0218304
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0217971
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0214297
NRIP1 nuclear receptor interacting protein 1 -0.0211018
PTCHD4 patched domain containing 4 -0.0210656
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 -0.0209417
ZMYM2 zinc finger, MYM-type 2 -0.0208921
CDK12 cyclin-dependent kinase 12 -0.0204764
RB1CC1 RB1-inducible coiled-coil 1 -0.0203529