Erdafitinib _RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erdafitinib perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erdafitinib _RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.166561
FRMD6 FERM domain containing 6 0.144882
EEF2 eukaryotic translation elongation factor 2 0.140309
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.133739
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.114859
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0996849
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0976571
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0919419
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0881442
ZNF438 zinc finger protein 438 0.0847671
EXT1 exostosin glycosyltransferase 1 0.0833266
ENO1 enolase 1, (alpha) 0.0778959
HMGA2 high mobility group AT-hook 2 0.0761051
HDAC9 histone deacetylase 9 0.0751676
SGMS2 sphingomyelin synthase 2 0.0696358
NAV3 neuron navigator 3 0.0685306
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0640462
RPL7 ribosomal protein L7 0.0608402
ARHGAP22 Rho GTPase activating protein 22 0.0600611
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0600163
MCL1 myeloid cell leukemia 1 0.0589272
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0587463
AGO2 argonaute RISC catalytic component 2 0.0586822
ELL2 elongation factor, RNA polymerase II, 2 0.0576635
RPS12 ribosomal protein S12 0.0570554
SET SET nuclear proto-oncogene 0.0564807
LDHA lactate dehydrogenase A 0.0527479
FLNB filamin B, beta 0.0526353
ZSWIM6 zinc finger, SWIM-type containing 6 0.0515246
ZEB1 zinc finger E-box binding homeobox 1 0.0512669
EGR1 early growth response 1 0.0507353
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0491343
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0485927
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0485571
CALR calreticulin 0.0481435
RPL30 ribosomal protein L30 0.0464717
SAMD4A sterile alpha motif domain containing 4A 0.0463823
LAMB3 laminin, beta 3 0.0449141
PGK1 phosphoglycerate kinase 1 0.0432398
RPS4X ribosomal protein S4, X-linked 0.0425208
HSPA8 heat shock 70kDa protein 8 0.0422712
MYH9 myosin, heavy chain 9, non-muscle 0.04134
MCTP1 multiple C2 domains, transmembrane 1 0.0407995
RACK1 receptor for activated C kinase 1 0.0407728
SRRM2 serine/arginine repetitive matrix 2 0.0403587
RPL23 ribosomal protein L23 0.0402321
LOC112694756 uncharaterized LOC112694756 0.0399604
CORO1C coronin, actin binding protein, 1C 0.0393951
RPS8 ribosomal protein S8 0.0393864
PDIA6 protein disulfide isomerase family A, member 6 0.0388328
FRMD4A FERM domain containing 4A 0.0385224
EEF1G eukaryotic translation elongation factor 1 gamma 0.0382651
CANX calnexin 0.038237
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0379954
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0360168
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0358045
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.035792
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0353828
RPL7A ribosomal protein L7a 0.0353376
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0346965
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0337846
C2CD2 C2 calcium-dependent domain containing 2 0.0335353
NAV2 neuron navigator 2 0.0333971
INTS6 integrator complex subunit 6 0.0333022
JMJD1C jumonji domain containing 1C 0.0319312
APLP2 amyloid beta (A4) precursor-like protein 2 0.0318281
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0317437
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0313867
RPL4 ribosomal protein L4 0.0311741
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0310025
RPL3 ribosomal protein L3 0.0306577
ASPH aspartate beta-hydroxylase 0.0306183
USP9X ubiquitin specific peptidase 9, X-linked 0.0303604
SFTPA2 surfactant protein A2 0.0300466
EFNB2 ephrin-B2 0.0299358
MKI67 marker of proliferation Ki-67 0.029276
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0287632
RPLP1 ribosomal protein, large, P1 0.0284558
RPL12 ribosomal protein L12 0.0280864
MLEC malectin 0.0275836
YBX1 Y box binding protein 1 0.0275228
NAP1L1 nucleosome assembly protein 1-like 1 0.0273076
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0272924
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0268886
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0267467
RPS2 ribosomal protein S2 0.0266304
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0263238
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0259729
SP100 SP100 nuclear antigen 0.0257994
DST dystonin 0.0256702
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0256008
RPS3 ribosomal protein S3 0.0253159
EIF1 eukaryotic translation initiation factor 1 0.0251749
TPM3 tropomyosin 3 0.0250281
TMED2 transmembrane emp24 domain trafficking protein 2 0.0247107
USO1 USO1 vesicle transport factor 0.02461
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0243405
SLC38A2 solute carrier family 38, member 2 0.023457
JUN jun proto-oncogene 0.0231181
RCOR1 REST corepressor 1 0.0230535

decreased expression

Symbol Name Standardized Value
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0610217
POTEF POTE ankyrin domain family, member F -0.0492855
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0434648
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0430902
PTK2 protein tyrosine kinase 2 -0.0424642
CALD1 caldesmon 1 -0.0395397
RBM25 RNA binding motif protein 25 -0.0341296
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0295598
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0287696
NF1 neurofibromin 1 -0.0286729
TPT1 tumor protein, translationally-controlled 1 -0.0282995
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0282422
SETD5 SET domain containing 5 -0.0274093
RPS6 ribosomal protein S6 -0.0273337
RTN4 reticulon 4 -0.026295
DIAPH3 diaphanous-related formin 3 -0.0257751
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0250365
PRRC2C proline-rich coiled-coil 2C -0.0243481
PTBP2 polypyrimidine tract binding protein 2 -0.0236172
USP3 ubiquitin specific peptidase 3 -0.0232045
WDR43 WD repeat domain 43 -0.0230899
RBM39 RNA binding motif protein 39 -0.0228844
SCAF11 SR-related CTD-associated factor 11 -0.0227595
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0225809
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0223636
SRPK2 SRSF protein kinase 2 -0.0222982
PFN1 profilin 1 -0.0222422
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0221802
EIF5B eukaryotic translation initiation factor 5B -0.0214287
SBF2 SET binding factor 2 -0.0213865
RPS23 ribosomal protein S23 -0.0212156
ACTG1 actin gamma 1 -0.0207259
PNISR PNN-interacting serine/arginine-rich protein -0.0207115
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0206147
PARD3 par-3 family cell polarity regulator -0.020385
RPS15 ribosomal protein S15 -0.0202881
RPS29 ribosomal protein S29 -0.0202222
WSB1 WD repeat and SOCS box containing 1 -0.0195701
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.01929
MON2 MON2 homolog (S. cerevisiae) -0.019288
THOC2 THO complex 2 -0.0192072
TMEM87A transmembrane protein 87A -0.0191881
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0191818
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0190376
TRIO trio Rho guanine nucleotide exchange factor -0.0188306
SRSF11 serine/arginine-rich splicing factor 11 -0.0186926
TCF12 transcription factor 12 -0.018654
TCERG1 transcription elongation regulator 1 -0.0183588
RPL21 ribosomal protein L21 -0.0183559
NKTR natural killer cell triggering receptor -0.0182346
BBX bobby sox homolog (Drosophila) -0.018233
LCORL ligand dependent nuclear receptor corepressor-like -0.0181842
ANTXR2 anthrax toxin receptor 2 -0.0180634
CELF1 CUGBP, Elav-like family member 1 -0.0180323
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0178717
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0178425
RAB3IP RAB3A interacting protein -0.0177652
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0176525
RPLP2 ribosomal protein, large, P2 -0.0176092
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0173666
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0172964
FOXJ3 forkhead box J3 -0.0172822
DLC1 DLC1 Rho GTPase activating protein -0.0171398
SNX14 sorting nexin 14 -0.0169757
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0169417
ZNF292 zinc finger protein 292 -0.0167854
BRD4 bromodomain containing 4 -0.0166994
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor -0.0165724
PTBP3 polypyrimidine tract binding protein 3 -0.0165322
ANKRD17 ankyrin repeat domain 17 -0.0165232
RNF145 ring finger protein 145 -0.0164654
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0163307
MT2A metallothionein 2A -0.0161819
ERBIN erbb2 interacting protein -0.0160496
FRS2 fibroblast growth factor receptor substrate 2 -0.0157664
BRWD1 bromodomain and WD repeat domain containing 1 -0.0156924
TENT2 terminal nucleotidyltransferase 2 -0.0155134
RPL28 ribosomal protein L28 -0.0154754
BIRC6 baculoviral IAP repeat containing 6 -0.0154513
ZFC3H1 zinc finger, C3H1-type containing -0.0153761
RPS10 ribosomal protein S10 -0.0152408
MARCHF7 membrane associated ring-CH-type finger 7 -0.0152029
NEMF nuclear export mediator factor -0.015138
NCOR1 nuclear receptor corepressor 1 -0.0150973
WDR45B WD repeat domain 45B -0.0150371
RPS24 ribosomal protein S24 -0.0148777
OLA1 Obg-like ATPase 1 -0.0148694
RB1CC1 RB1-inducible coiled-coil 1 -0.0148675
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0147324
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0147123
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.014591
PTMA prothymosin, alpha -0.0145741
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0145638
UBE2E1 ubiquitin-conjugating enzyme E2E 1 -0.0145496
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha -0.0144652
RPL38 ribosomal protein L38 -0.0144437
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0144372
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0144103
FUBP3 far upstream element (FUSE) binding protein 3 -0.0143799
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 -0.0143151