Erdafitinib _SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erdafitinib perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erdafitinib _SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FMN1 formin 1 0.164719
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.142673
SFTPA2 surfactant protein A2 0.125262
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.118941
ENO1 enolase 1, (alpha) 0.0925872
DST dystonin 0.0830598
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0729678
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0587355
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0550581
MYH9 myosin, heavy chain 9, non-muscle 0.0543838
PGK1 phosphoglycerate kinase 1 0.0513848
LDHA lactate dehydrogenase A 0.0494623
RNF213 ring finger protein 213 0.049154
IGF1R insulin-like growth factor 1 receptor 0.0480464
ANGPTL4 angiopoietin-like 4 0.0458646
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0456873
CTSB cathepsin B 0.0453004
HSPA8 heat shock 70kDa protein 8 0.0446281
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0428359
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0413612
HDAC9 histone deacetylase 9 0.0411236
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0405523
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0403583
EEF2 eukaryotic translation elongation factor 2 0.0395962
CD44 CD44 molecule (Indian blood group) 0.0391907
MACF1 microtubule-actin crosslinking factor 1 0.0383964
RUNX1 runt-related transcription factor 1 0.03807
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0373873
FLNA filamin A, alpha 0.0371977
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0366328
FRMD4A FERM domain containing 4A 0.0364301
LPP LIM domain containing preferred translocation partner in lipoma 0.0356683
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0352395
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0351602
B2M beta-2-microglobulin 0.0348674
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0348643
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0347879
SET SET nuclear proto-oncogene 0.0346774
TPM3 tropomyosin 3 0.0344354
RPS12 ribosomal protein S12 0.0343825
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0338328
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0333356
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.033026
MCL1 myeloid cell leukemia 1 0.0328372
CENPF centromere protein F, 350/400kDa 0.0327901
CCND1 cyclin D1 0.0323962
NAP1L1 nucleosome assembly protein 1-like 1 0.0318887
NLGN1 neuroligin 1 0.0308089
SP100 SP100 nuclear antigen 0.0307901
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0304225
ACTN4 actinin, alpha 4 0.0295871
LAMP2 lysosomal-associated membrane protein 2 0.0295624
SVIL supervillin 0.0291915
SAMD9 sterile alpha motif domain containing 9 0.0289909
AMOTL1 angiomotin like 1 0.0289352
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0289214
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0287748
TRIO trio Rho guanine nucleotide exchange factor 0.0283979
RIGI RNA sensor RIG-I 0.0283967
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.028278
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0282337
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.02778
RASAL2 RAS protein activator like 2 0.0276872
WARS1 tryptophanyl-tRNA synthetase 1 0.027643
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.026979
FBXL17 F-box and leucine-rich repeat protein 17 0.0261494
PTPRG protein tyrosine phosphatase, receptor type, G 0.0259547
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0258451
CXCL8 chemokine (C-X-C motif) ligand 8 0.0258441
IFI44L interferon-induced protein 44-like 0.0255808
BHLHE40 basic helix-loop-helix family, member e40 0.0255096
FBXO32 F-box protein 32 0.025503
IFI6 interferon, alpha-inducible protein 6 0.0254852
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0254168
NFE2L1 nuclear factor, erythroid 2-like 1 0.0252833
PLEC plectin 0.0251145
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0248227
SRRM2 serine/arginine repetitive matrix 2 0.0244563
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0243986
WNK1 WNK lysine deficient protein kinase 1 0.0242635
WWTR1 WW domain containing transcription regulator 1 0.0242029
TRIM44 tripartite motif containing 44 0.0238912
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.023891
ZBTB38 zinc finger and BTB domain containing 38 0.023865
ZBTB20 zinc finger and BTB domain containing 20 0.0238528
IFIH1 interferon induced with helicase C domain 1 0.0235867
RAD51B RAD51 paralog B 0.0235231
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0234676
PMEL premelanosome protein 0.0234542
SEPTIN9 septin 9 0.023383
CHD4 chromodomain helicase DNA binding protein 4 0.0232706
ASPH aspartate beta-hydroxylase 0.023239
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0231766
MYO9A myosin IXA 0.0231145
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0231081
ALCAM activated leukocyte cell adhesion molecule 0.0227533
KPNB1 karyopherin (importin) beta 1 0.0224824
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0222905
MKI67 marker of proliferation Ki-67 0.0221213
CHSY3 chondroitin sulfate synthase 3 0.0220867

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.152763
SREBF2 sterol regulatory element binding transcription factor 2 -0.0717124
VIM vimentin -0.0698246
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0655363
FNDC3B fibronectin type III domain containing 3B -0.0635796
GOLGA4 golgin A4 -0.0585916
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0549364
FN1 fibronectin 1 -0.0513085
TENM1 teneurin transmembrane protein 1 -0.0505026
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0494848
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0465707
RPS6 ribosomal protein S6 -0.0446078
SETD5 SET domain containing 5 -0.0443514
MT2A metallothionein 2A -0.0442402
FTL ferritin, light polypeptide -0.0432519
WDR45B WD repeat domain 45B -0.0393232
SBF2 SET binding factor 2 -0.0370283
RNF145 ring finger protein 145 -0.03666
KMT2E lysine (K)-specific methyltransferase 2E -0.0365946
ADAM17 ADAM metallopeptidase domain 17 -0.0359614
POTEF POTE ankyrin domain family, member F -0.0352063
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0348002
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0315018
MT1X metallothionein 1X -0.0305548
RTN4 reticulon 4 -0.0303722
DLG1 discs, large homolog 1 (Drosophila) -0.0303237
GARS1 glycyl-tRNA synthetase 1 -0.0302259
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0291387
KDM5B lysine (K)-specific demethylase 5B -0.0289363
BBX bobby sox homolog (Drosophila) -0.0282651
HELZ helicase with zinc finger -0.0276191
CDK19 cyclin-dependent kinase 19 -0.0273877
PTBP2 polypyrimidine tract binding protein 2 -0.0268741
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0266065
GLS2 glutaminase 2 (liver, mitochondrial) -0.026497
ZFAND3 zinc finger, AN1-type domain 3 -0.0263449
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0258782
VDAC1 voltage-dependent anion channel 1 -0.025821
NPEPPS aminopeptidase puromycin sensitive -0.0256871
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0256539
BRWD3 bromodomain and WD repeat domain containing 3 -0.0252571
RBM39 RNA binding motif protein 39 -0.0249804
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0249587
SRP54 signal recognition particle 54kDa -0.0247847
WSB1 WD repeat and SOCS box containing 1 -0.0247002
CLEC2D C-type lectin domain family 2, member D -0.0243728
MIS18BP1 MIS18 binding protein 1 -0.024364
MSN moesin -0.0242401
COPA coatomer protein complex, subunit alpha -0.0242199
THOC2 THO complex 2 -0.0241842
WAC WW domain containing adaptor with coiled-coil -0.0236164
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0233486
SEC24A SEC24 family member A -0.0229725
DOCK7 dedicator of cytokinesis 7 -0.0227719
CCNL1 cyclin L1 -0.0221586
NKTR natural killer cell triggering receptor -0.0221506
ACBD3 acyl-CoA binding domain containing 3 -0.0221018
CLIP4 CAP-GLY domain containing linker protein family, member 4 -0.022069
COG5 component of oligomeric golgi complex 5 -0.0212835
PNISR PNN-interacting serine/arginine-rich protein -0.0212655
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0212225
ITGB5 integrin, beta 5 -0.0208799
AKAP10 A kinase (PRKA) anchor protein 10 -0.0207934
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0205705
ATP11B ATPase, class VI, type 11B -0.0202434
NOTCH2 notch 2 -0.0201435
NBAS neuroblastoma amplified sequence -0.0198012
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0198008
IL1RAP interleukin 1 receptor accessory protein -0.0196782
ARF4 ADP-ribosylation factor 4 -0.0196624
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0196474
CPEB2 cytoplasmic polyadenylation element binding protein 2 -0.0194108
PUM2 pumilio RNA-binding family member 2 -0.0191599
TMEM87A transmembrane protein 87A -0.0191543
LITAF lipopolysaccharide-induced TNF factor -0.0191085
FAM13B family with sequence similarity 13, member B -0.0189882
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0189866
SRPK2 SRSF protein kinase 2 -0.0189342
TFG TRK-fused gene -0.0187922
NGLY1 N-glycanase 1 -0.0187541
RHEB Ras homolog enriched in brain -0.0187062
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0185931
YTHDC1 YTH domain containing 1 -0.0184619
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0184558
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 -0.0184511
TMEM263 transmembrane protein 263 -0.0183596
FNIP1 folliculin interacting protein 1 -0.018253
TCERG1 transcription elongation regulator 1 -0.0181213
UBC ubiquitin C -0.0180666
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0179103
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.017883
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0178044
BRWD1 bromodomain and WD repeat domain containing 1 -0.017715
RAB7A RAB7A, member RAS oncogene family -0.0176738
SPAG9 sperm associated antigen 9 -0.0175756
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0175714
VEZT vezatin, adherens junctions transmembrane protein -0.0174337
ZNF292 zinc finger protein 292 -0.0171466
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0170757
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0170742