Erdafitinib _SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erdafitinib perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erdafitinib _SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.448965
ENO1 enolase 1, (alpha) 0.127815
CXCL8 chemokine (C-X-C motif) ligand 8 0.124972
LDHA lactate dehydrogenase A 0.110117
ERRFI1 ERBB receptor feedback inhibitor 1 0.101209
FTH1 ferritin, heavy polypeptide 1 0.100814
NDRG1 N-myc downstream regulated 1 0.0996705
MYH9 myosin, heavy chain 9, non-muscle 0.0978352
CDH13 cadherin 13 0.0854665
STC1 stanniocalcin 1 0.0802232
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0776023
PDIA6 protein disulfide isomerase family A, member 6 0.0741053
TGFBI transforming growth factor, beta-induced, 68kDa 0.071607
SOD2 superoxide dismutase 2, mitochondrial 0.0701684
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0690146
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0688581
PRSS23 protease, serine, 23 0.0684579
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0662714
HMGA2 high mobility group AT-hook 2 0.0655334
MT2A metallothionein 2A 0.0651635
VIM vimentin 0.0634538
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0586877
TIMP3 TIMP metallopeptidase inhibitor 3 0.0581343
ZSWIM6 zinc finger, SWIM-type containing 6 0.0579151
PGK1 phosphoglycerate kinase 1 0.0578913
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0577478
CALR calreticulin 0.0570676
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0567398
EEF2 eukaryotic translation elongation factor 2 0.0536623
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0532668
CD44 CD44 molecule (Indian blood group) 0.0525011
KYNU kynureninase 0.0522067
NRXN3 neurexin 3 0.0489298
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.047437
RPS12 ribosomal protein S12 0.0470282
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0469448
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0461218
RPL37A ribosomal protein L37a 0.0443806
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0421584
ECE1 endothelin converting enzyme 1 0.0417531
IGFBP3 insulin-like growth factor binding protein 3 0.0416773
TRIO trio Rho guanine nucleotide exchange factor 0.0410957
MACF1 microtubule-actin crosslinking factor 1 0.0409978
ATXN1 ataxin 1 0.0398922
RND3 Rho family GTPase 3 0.0398781
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0398493
ASPH aspartate beta-hydroxylase 0.0392797
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.039226
ANO6 anoctamin 6 0.0389708
FTL ferritin, light polypeptide 0.0389448
MCL1 myeloid cell leukemia 1 0.0374053
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0368412
INTS6 integrator complex subunit 6 0.0368038
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0364388
SETBP1 SET binding protein 1 0.0362335
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0362208
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.035722
LIMS1 LIM and senescent cell antigen-like domains 1 0.0355635
LOC112694756 uncharaterized LOC112694756 0.0354604
DST dystonin 0.0344551
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0344056
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0343794
EGFR epidermal growth factor receptor 0.0342966
ZBTB20 zinc finger and BTB domain containing 20 0.0342533
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0341575
GOLGB1 golgin B1 0.0338575
PRELID2 PRELI domain containing 2 0.0324336
AKAP12 A kinase (PRKA) anchor protein 12 0.0320633
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0318806
GLUL glutamate-ammonia ligase 0.0313762
EFNA5 ephrin-A5 0.0313222
FNIP1 folliculin interacting protein 1 0.031056
KTN1 kinectin 1 (kinesin receptor) 0.0308537
LOXL2 lysyl oxidase-like 2 0.0308405
DPYD dihydropyrimidine dehydrogenase 0.0307546
HOOK2 hook microtubule-tethering protein 2 0.0304432
HLA-A major histocompatibility complex, class I, A 0.0303671
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0296206
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0294014
SCARB2 scavenger receptor class B, member 2 0.0293013
MLEC malectin 0.0291118
MYLK myosin light chain kinase 0.0290098
F3 coagulation factor III (thromboplastin, tissue factor) 0.0287582
BIRC3 baculoviral IAP repeat containing 3 0.028612
ARHGAP24 Rho GTPase activating protein 24 0.0283922
RPS27A ribosomal protein S27a 0.0278437
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.027591
CANX calnexin 0.027423
MORF4L2 mortality factor 4 like 2 0.0271489
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.027118
MAML2 mastermind-like 2 (Drosophila) 0.0270419
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0270233
CLEC1B C-type lectin domain family 1, member B 0.0269991
MAP1B microtubule-associated protein 1B 0.026689
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0265575
FBXL7 F-box and leucine-rich repeat protein 7 0.0263485
SRRM2 serine/arginine repetitive matrix 2 0.0262688
TLN1 talin 1 0.0261743
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0260333
FAM13A family with sequence similarity 13, member A 0.0257461

decreased expression

Symbol Name Standardized Value
GARS1 glycyl-tRNA synthetase 1 -0.0579789
HLA-B major histocompatibility complex, class I, B -0.0546054
H3-3B H3.3 histone B -0.0476455
SETD5 SET domain containing 5 -0.0472821
COL1A1 collagen, type I, alpha 1 -0.0451422
SEC24D SEC24 family member D -0.044671
IARS1 isoleucyl-tRNA synthetase 1 -0.0412837
ANKRD17 ankyrin repeat domain 17 -0.0379308
RTN4 reticulon 4 -0.0360235
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0344704
RNF24 ring finger protein 24 -0.0342413
MT1X metallothionein 1X -0.0327502
POTEF POTE ankyrin domain family, member F -0.0314531
NDFIP1 Nedd4 family interacting protein 1 -0.0302606
SRPK2 SRSF protein kinase 2 -0.0300971
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0295426
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0288769
KMT2E lysine (K)-specific methyltransferase 2E -0.0288714
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0275298
SDC4 syndecan 4 -0.0267843
ELL2 elongation factor, RNA polymerase II, 2 -0.0267464
SRSF11 serine/arginine-rich splicing factor 11 -0.0263681
TMEM263 transmembrane protein 263 -0.0258989
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.025776
COL1A2 collagen, type I, alpha 2 -0.0254956
MATR3 matrin 3 -0.0254489
ANKRD11 ankyrin repeat domain 11 -0.0253904
CFDP1 craniofacial development protein 1 -0.0253579
COL6A1 collagen, type VI, alpha 1 -0.0252983
WDR45B WD repeat domain 45B -0.0252153
AVL9 AVL9 homolog (S. cerevisiase) -0.0250254
TXNIP thioredoxin interacting protein -0.0249162
UBE2H ubiquitin-conjugating enzyme E2H -0.0247828
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0247367
VEGFA vascular endothelial growth factor A -0.0245638
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0240071
GLG1 golgi glycoprotein 1 -0.0235529
USP33 ubiquitin specific peptidase 33 -0.0234052
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0232058
RPS6 ribosomal protein S6 -0.0231681
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0229889
NAMPT nicotinamide phosphoribosyltransferase -0.0227385
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0227136
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0222211
MAPK8 mitogen-activated protein kinase 8 -0.0219828
COG5 component of oligomeric golgi complex 5 -0.0219563
WDPCP WD repeat containing planar cell polarity effector -0.0219221
RNF145 ring finger protein 145 -0.0214874
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0211397
XPO1 exportin 1 -0.0210795
ANKRD12 ankyrin repeat domain 12 -0.020968
FOXJ3 forkhead box J3 -0.0209411
ZNF292 zinc finger protein 292 -0.0207276
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0207106
SCAF11 SR-related CTD-associated factor 11 -0.0206776
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0205175
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0201847
MAP2K4 mitogen-activated protein kinase kinase 4 -0.0201678
RHEB Ras homolog enriched in brain -0.0201266
CADM1 cell adhesion molecule 1 -0.0200445
RBM39 RNA binding motif protein 39 -0.0200423
ACTG1 actin gamma 1 -0.019825
CRLS1 cardiolipin synthase 1 -0.019604
ANLN anillin, actin binding protein -0.0195793
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0195453
SUB1 SUB1 homolog (S. cerevisiae) -0.0195116
AFF4 AF4/FMR2 family, member 4 -0.0194098
PPME1 protein phosphatase methylesterase 1 -0.0192902
TMEM131 transmembrane protein 131 -0.0188939
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0186084
TNPO3 transportin 3 -0.0185822
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0185807
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit -0.0185522
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0184618
ZNF736 zinc finger protein 736 -0.0184448
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0184394
CDC27 cell division cycle 27 -0.018381
HNRNPR heterogeneous nuclear ribonucleoprotein R -0.0182715
RBM25 RNA binding motif protein 25 -0.0182169
RNF216 ring finger protein 216 -0.0180638
POM121C POM121 transmembrane nucleoporin C -0.0180591
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0180278
RFWD3 ring finger and WD repeat domain 3 -0.0179483
TENT4A terminal nucleotidyltransferase 4A -0.017925
LCORL ligand dependent nuclear receptor corepressor-like -0.0178479
NT5C2 5'-nucleotidase, cytosolic II -0.0177955
NOP58 NOP58 ribonucleoprotein -0.0177804
AXL AXL receptor tyrosine kinase -0.0177747
TNPO1 transportin 1 -0.0177725
CKAP2 cytoskeleton associated protein 2 -0.0175269
SNU13 small nuclear ribonucleoprotein 13 -0.0174617
PTN pleiotrophin -0.0174495
MOB4 MOB family member 4, phocein -0.0174084
SUN1 Sad1 and UNC84 domain containing 1 -0.0173616
NKTR natural killer cell triggering receptor -0.0172949
TBC1D5 TBC1 domain family, member 5 -0.0172422
RBM6 RNA binding motif protein 6 -0.0172351
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0172077
SPATS2 spermatogenesis associated, serine-rich 2 -0.0171026
BCAR3 breast cancer anti-estrogen resistance 3 -0.0169766