Erdafitinib _SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erdafitinib perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erdafitinib _SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.156441
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.113635
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.11299
TRIO trio Rho guanine nucleotide exchange factor 0.108447
SFTPA2 surfactant protein A2 0.105351
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0955295
HMGA2 high mobility group AT-hook 2 0.0939784
ASPH aspartate beta-hydroxylase 0.0929628
STC2 stanniocalcin 2 0.0809389
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0769122
ZSWIM6 zinc finger, SWIM-type containing 6 0.0734834
ENO1 enolase 1, (alpha) 0.0731464
B2M beta-2-microglobulin 0.0714844
NRG1 neuregulin 1 0.0694342
PLIN2 perilipin 2 0.0653486
MRPS6 mitochondrial ribosomal protein S6 0.0625395
MYOF myoferlin 0.0622527
GRB10 growth factor receptor-bound protein 10 0.0600122
LIMCH1 LIM and calponin homology domains 1 0.0595531
EFNA5 ephrin-A5 0.0569575
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0555994
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0550318
FTL ferritin, light polypeptide 0.0545707
MCL1 myeloid cell leukemia 1 0.0537413
ERRFI1 ERBB receptor feedback inhibitor 1 0.0531168
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0494194
MT2A metallothionein 2A 0.0458078
FAM13A family with sequence similarity 13, member A 0.0454989
RPS12 ribosomal protein S12 0.0451944
FLNB filamin B, beta 0.0440293
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0438584
VIM vimentin 0.0419406
CALR calreticulin 0.0411485
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0410987
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.040424
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0403462
APLP2 amyloid beta (A4) precursor-like protein 2 0.0390866
RAI14 retinoic acid induced 14 0.0384819
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.038263
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0380775
CTBP2 C-terminal binding protein 2 0.0380693
TMSB10 thymosin beta 10 0.0379693
AKAP12 A kinase (PRKA) anchor protein 12 0.0379426
INTS6 integrator complex subunit 6 0.0376045
RPL37A ribosomal protein L37a 0.0375418
FAT1 FAT atypical cadherin 1 0.0366685
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0350909
S100A10 S100 calcium binding protein A10 0.0340793
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0339407
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.033803
PDLIM5 PDZ and LIM domain 5 0.0330745
MACF1 microtubule-actin crosslinking factor 1 0.0329594
IFI6 interferon, alpha-inducible protein 6 0.03273
CXCL8 chemokine (C-X-C motif) ligand 8 0.0324349
AEBP2 AE binding protein 2 0.0319626
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0315775
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.03155
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.031035
DST dystonin 0.0308563
SOD2 superoxide dismutase 2, mitochondrial 0.0306986
PDIA6 protein disulfide isomerase family A, member 6 0.0306919
RACK1 receptor for activated C kinase 1 0.0303749
SRRM2 serine/arginine repetitive matrix 2 0.0300941
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.029961
RND3 Rho family GTPase 3 0.0287862
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0287777
LYST lysosomal trafficking regulator 0.0280835
PDIA3 protein disulfide isomerase family A, member 3 0.0279587
DUSP6 dual specificity phosphatase 6 0.0279394
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0277241
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0277182
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0273967
IGFBP5 insulin-like growth factor binding protein 5 0.0273748
RPS27 ribosomal protein S27 0.027263
LMNA lamin A/C 0.0272426
IFI27 interferon, alpha-inducible protein 27 0.0272215
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0271145
OXR1 oxidation resistance 1 0.0270239
TPM3 tropomyosin 3 0.0269508
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0268889
EZR ezrin 0.0265226
RPL35A ribosomal protein L35a 0.026104
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0260366
ENO2 enolase 2 (gamma, neuronal) 0.026017
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0259454
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0258065
RPS8 ribosomal protein S8 0.0257523
LOXL2 lysyl oxidase-like 2 0.0253209
PKM pyruvate kinase, muscle 0.0253015
ESYT2 extended synaptotagmin-like protein 2 0.025162
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0251232
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0249135
DSTN destrin (actin depolymerizing factor) 0.0249036
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0248747
CADM1 cell adhesion molecule 1 0.0248457
RPL31 ribosomal protein L31 0.0247972
RPL26 ribosomal protein L26 0.0247017
AKAP13 A kinase (PRKA) anchor protein 13 0.0244502
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0243687
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0243032

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.128601
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.121462
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0782175
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0697235
OSMR oncostatin M receptor -0.0484268
TMEM156 transmembrane protein 156 -0.0438712
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.041218
FN1 fibronectin 1 -0.041089
SOS1 son of sevenless homolog 1 (Drosophila) -0.0394436
ETNK1 ethanolamine kinase 1 -0.0356632
NRP1 neuropilin 1 -0.0330468
PELO pelota homolog (Drosophila) -0.0306408
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0305314
SMOX spermine oxidase -0.0302812
NAMPT nicotinamide phosphoribosyltransferase -0.0302617
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0298545
LCORL ligand dependent nuclear receptor corepressor-like -0.0295118
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0294585
GLIS3 GLIS family zinc finger 3 -0.0289361
CENPF centromere protein F, 350/400kDa -0.0272004
UBE2K ubiquitin-conjugating enzyme E2K -0.0266175
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0263938
RBM39 RNA binding motif protein 39 -0.0260433
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0259199
FOXP1 forkhead box P1 -0.0254796
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0251474
ETV1 ets variant 1 -0.0250968
ETV6 ets variant 6 -0.025063
CAB39 calcium binding protein 39 -0.0249852
FNBP1 formin binding protein 1 -0.0247457
COPA coatomer protein complex, subunit alpha -0.024263
PTBP3 polypyrimidine tract binding protein 3 -0.0242041
KLHL5 kelch-like family member 5 -0.023388
SYT1 synaptotagmin I -0.0233866
CTNND1 catenin (cadherin-associated protein), delta 1 -0.022188
VCL vinculin -0.0220316
ADD3 adducin 3 (gamma) -0.0213347
NTN4 netrin 4 -0.0205247
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.020399
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0201054
FAM20C family with sequence similarity 20, member C -0.0199713
NEK7 NIMA-related kinase 7 -0.0199185
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0197443
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0194534
RAD21 RAD21 homolog (S. pombe) -0.0193892
PNISR PNN-interacting serine/arginine-rich protein -0.0193413
SQSTM1 sequestosome 1 -0.0187882
ITGA1 integrin, alpha 1 -0.0187339
KSR1 kinase suppressor of ras 1 -0.018713
FAF2 Fas associated factor family member 2 -0.0185606
OGA O-GlcNAcase -0.0185168
FMN1 formin 1 -0.0183347
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0181988
WDR45B WD repeat domain 45B -0.0177922
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0175384
PTPRE protein tyrosine phosphatase, receptor type, E -0.0172313
RBM25 RNA binding motif protein 25 -0.0171662
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0171588
RAB31 RAB31, member RAS oncogene family -0.0169498
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.016936
MIS18BP1 MIS18 binding protein 1 -0.016708
RUNX2 runt-related transcription factor 2 -0.0166961
TM9SF3 transmembrane 9 superfamily member 3 -0.0164494
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0164418
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0161493
RRBP1 ribosome binding protein 1 -0.0161105
ACBD3 acyl-CoA binding domain containing 3 -0.0157584
POU2F1 POU class 2 homeobox 1 -0.0157342
PHF12 PHD finger protein 12 -0.0156982
STRN3 striatin, calmodulin binding protein 3 -0.0156626
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0155734
SCLT1 sodium channel and clathrin linker 1 -0.0155285
PCNX1 pecanex 1 -0.0152295
USP3 ubiquitin specific peptidase 3 -0.0152158
PRPF3 pre-mRNA processing factor 3 -0.0152083
DUSP5 dual specificity phosphatase 5 -0.0150883
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.014914
CCNJL cyclin J-like -0.0148442
SSH1 slingshot protein phosphatase 1 -0.0146925
GCC2 GRIP and coiled-coil domain containing 2 -0.0146728
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0146262
RNF145 ring finger protein 145 -0.0145699
MBD5 methyl-CpG binding domain protein 5 -0.0144412
CENPE centromere protein E, 312kDa -0.0143817
RHEB Ras homolog enriched in brain -0.0143607
THBS1 thrombospondin 1 -0.0143207
MON2 MON2 homolog (S. cerevisiae) -0.0143111
SEC31A SEC31 homolog A (S. cerevisiae) -0.0142557
EML4 echinoderm microtubule associated protein like 4 -0.0142472
RNF24 ring finger protein 24 -0.0140444
NRIP1 nuclear receptor interacting protein 1 -0.0140089
ITGB5 integrin, beta 5 -0.0137638
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0136753
RTN4 reticulon 4 -0.0135682
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -0.0134937
HOMER2 homer scaffolding protein 2 -0.0134672
GAS2L3 growth arrest-specific 2 like 3 -0.0133844
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0133686
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0132087
GOLGA3 golgin A3 -0.0131965