Erlotinib_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erlotinib perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erlotinib_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.0460779
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0322596
NAV2 neuron navigator 2 0.0316784
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0305783
RNF145 ring finger protein 145 0.0303943
N4BP2L2 NEDD4 binding protein 2-like 2 0.0289515
AKAP13 A kinase (PRKA) anchor protein 13 0.028847
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0287743
NPEPPS aminopeptidase puromycin sensitive 0.0282589
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0276883
MYOF myoferlin 0.0269184
FMNL2 formin-like 2 0.0259761
NUP58 nucleoporin 58 0.0259751
MSN moesin 0.0259137
ZNF292 zinc finger protein 292 0.0257576
WTAP Wilms tumor 1 associated protein 0.0257061
NBAS neuroblastoma amplified sequence 0.0255901
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0255078
ITM2B integral membrane protein 2B 0.0253201
HLA-A major histocompatibility complex, class I, A 0.0245019
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0239569
POTEF POTE ankyrin domain family, member F 0.0235548
KIF1B kinesin family member 1B 0.0234972
SCAF8 SR-related CTD-associated factor 8 0.0233259
MTF2 metal response element binding transcription factor 2 0.0230386
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma 0.0229991
EEF2 eukaryotic translation elongation factor 2 0.0229795
BUB3 BUB3 mitotic checkpoint protein 0.022851
AVL9 AVL9 homolog (S. cerevisiase) 0.0225399
RAB8B RAB8B, member RAS oncogene family 0.0224743
SPPL3 signal peptide peptidase like 3 0.0223896
JARID2 jumonji, AT rich interactive domain 2 0.0222735
AFF1 AF4/FMR2 family, member 1 0.022248
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0220296
ATP13A3 ATPase type 13A3 0.0219739
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0218847
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 0.0216373
TAPBP TAP binding protein (tapasin) 0.0214599
NF1 neurofibromin 1 0.0214272
RPS8 ribosomal protein S8 0.0213221
ERBIN erbb2 interacting protein 0.0211255
SFTPA2 surfactant protein A2 0.0210482
TMCC1 transmembrane and coiled-coil domain family 1 0.0210063
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.02099
SNX9 sorting nexin 9 0.0209608
LAMB3 laminin, beta 3 0.02071
IGFBP6 insulin-like growth factor binding protein 6 0.0206874
SCARB2 scavenger receptor class B, member 2 0.0206273
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0206141
HILPDA hypoxia inducible lipid droplet-associated 0.0202934
YBX1 Y box binding protein 1 0.0202145
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) 0.0201686
TUT4 terminal uridylyl transferase 4 0.020116
ANKRD36 ankyrin repeat domain 36 0.0200669
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0200414
UBE3C ubiquitin protein ligase E3C 0.0199565
TIMP1 TIMP metallopeptidase inhibitor 1 0.0199534
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0199526
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0199103
MAPK8 mitogen-activated protein kinase 8 0.0199013
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0198843
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0198665
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0197414
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0195378
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.019477
OSBPL9 oxysterol binding protein-like 9 0.0194173
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 0.0193949
ZDHHC20 zinc finger, DHHC-type containing 20 0.0193515
RPS12 ribosomal protein S12 0.0191489
RAP1B RAP1B, member of RAS oncogene family 0.0191341
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0189397
IL1RAP interleukin 1 receptor accessory protein 0.0188366
RPS3 ribosomal protein S3 0.0188241
ZNF680 zinc finger protein 680 0.0188125
FNBP1 formin binding protein 1 0.0188107
OPTN optineurin 0.0187491
RPL5 ribosomal protein L5 0.0186893
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0186502
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0185546
PTPRA protein tyrosine phosphatase, receptor type, A 0.0184014
ATG12 autophagy related 12 0.0183877
XRN2 5'-3' exoribonuclease 2 0.01828
TIMP2 TIMP metallopeptidase inhibitor 2 0.018234
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0182212
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0182092
RPL28 ribosomal protein L28 0.0180984
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0179595
CEP170 centrosomal protein 170kDa 0.0179394
FUBP1 far upstream element (FUSE) binding protein 1 0.0179312
NHSL1 NHS-like 1 0.0178816
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0178295
TNPO1 transportin 1 0.0176404
FNTA farnesyltransferase, CAAX box, alpha 0.0176344
FSCN1 fascin actin-bundling protein 1 0.0175906
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0175319
CST3 cystatin C 0.017489
FRMD6 FERM domain containing 6 0.0174754
SBF2 SET binding factor 2 0.0174591
PRPF4B pre-mRNA processing factor 4B 0.017456
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0174389

decreased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 -0.2592
IGFBP3 insulin-like growth factor binding protein 3 -0.243779
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.203612
LOX lysyl oxidase -0.113581
EXT1 exostosin glycosyltransferase 1 -0.103119
FN1 fibronectin 1 -0.102716
PSD3 pleckstrin and Sec7 domain containing 3 -0.0988863
NDRG1 N-myc downstream regulated 1 -0.0973968
COL1A1 collagen, type I, alpha 1 -0.0955711
TGFBI transforming growth factor, beta-induced, 68kDa -0.0930261
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0919244
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0886357
F3 coagulation factor III (thromboplastin, tissue factor) -0.0822001
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0730179
CALU calumenin -0.0719071
CANX calnexin -0.0718157
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0710213
ENO1 enolase 1, (alpha) -0.0689776
ANXA2 annexin A2 -0.0677209
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.065222
CALD1 caldesmon 1 -0.0648135
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0646907
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0624219
GLIS3 GLIS family zinc finger 3 -0.061883
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0594053
AHNAK AHNAK nucleoprotein -0.058103
CAV1 caveolin 1, caveolae protein, 22kDa -0.0565461
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0554629
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0530325
ARRDC3 arrestin domain containing 3 -0.0518019
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0501674
NRXN3 neurexin 3 -0.049468
MEF2A myocyte enhancer factor 2A -0.0487472
CD99 CD99 molecule -0.0452395
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0451447
HIPK2 homeodomain interacting protein kinase 2 -0.0448224
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0443452
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.04417
COL1A2 collagen, type I, alpha 2 -0.0441313
VCL vinculin -0.0437663
STC2 stanniocalcin 2 -0.0435224
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0434577
MBD5 methyl-CpG binding domain protein 5 -0.0432265
TPM4 tropomyosin 4 -0.0427249
CDK6 cyclin-dependent kinase 6 -0.0420931
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0412955
ADM adrenomedullin -0.0397138
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0387965
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0382195
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0381225
ANKRD17 ankyrin repeat domain 17 -0.0378278
CD44 CD44 molecule (Indian blood group) -0.0378178
CADM1 cell adhesion molecule 1 -0.0375378
FAM13A family with sequence similarity 13, member A -0.037153
PGK1 phosphoglycerate kinase 1 -0.0370735
EFNA5 ephrin-A5 -0.036577
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0364647
EPAS1 endothelial PAS domain protein 1 -0.0364192
TXNIP thioredoxin interacting protein -0.0362674
MT2A metallothionein 2A -0.0361053
WSB1 WD repeat and SOCS box containing 1 -0.035561
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0354304
VIM vimentin -0.0354226
DPYD dihydropyrimidine dehydrogenase -0.0352052
ADNP activity-dependent neuroprotector homeobox -0.0351867
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.033842
TNS3 tensin 3 -0.0338103
BIRC6 baculoviral IAP repeat containing 6 -0.0330915
RRBP1 ribosome binding protein 1 -0.0328154
BRWD3 bromodomain and WD repeat domain containing 3 -0.0327127
ATXN1 ataxin 1 -0.0325902
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0325669
TBC1D23 TBC1 domain family, member 23 -0.0324115
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0322112
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0320338
ASPH aspartate beta-hydroxylase -0.0320228
LMAN1 lectin, mannose-binding, 1 -0.031628
KAZN kazrin, periplakin interacting protein -0.0313611
WDR26 WD repeat domain 26 -0.0310998
EXOC4 exocyst complex component 4 -0.0308546
LOC112694756 uncharaterized LOC112694756 -0.030838
AFF4 AF4/FMR2 family, member 4 -0.0295017
MAP1B microtubule-associated protein 1B -0.0290362
RAB31 RAB31, member RAS oncogene family -0.0289068
H3-3B H3.3 histone B -0.0284839
H1-0 H1.0 linker histone -0.0284252
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0284226
HIP1 huntingtin interacting protein 1 -0.0283178
COL6A2 collagen, type VI, alpha 2 -0.0281701
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0279519
PRSS23 protease, serine, 23 -0.0276101
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0272753
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0271307
RAB27A RAB27A, member RAS oncogene family -0.0270825
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0270471
MYO1E myosin IE -0.0270221
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0267606
VDAC1 voltage-dependent anion channel 1 -0.0267606
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0267477
RNF24 ring finger protein 24 -0.0260729