Erythromycin_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Erythromycin perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Erythromycin_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.076423
EEF2 eukaryotic translation elongation factor 2 0.0518565
PABPC1 poly(A) binding protein, cytoplasmic 1 0.051475
UGCG UDP-glucose ceramide glucosyltransferase 0.0444987
MYH9 myosin, heavy chain 9, non-muscle 0.0433497
OGA O-GlcNAcase 0.0427215
ELL2 elongation factor, RNA polymerase II, 2 0.0413543
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0407496
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0393931
RPS2 ribosomal protein S2 0.0385834
RPS6 ribosomal protein S6 0.0374771
ATP13A3 ATPase type 13A3 0.0350734
MXI1 MAX interactor 1, dimerization protein 0.0350606
LAMP2 lysosomal-associated membrane protein 2 0.033051
ANLN anillin, actin binding protein 0.0328664
TSC22D2 TSC22 domain family, member 2 0.0323761
FLNA filamin A, alpha 0.0319844
PCBP2 poly(rC) binding protein 2 0.0314747
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0303884
FTH1 ferritin, heavy polypeptide 1 0.0298797
HELZ helicase with zinc finger 0.0295098
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0290869
ESYT2 extended synaptotagmin-like protein 2 0.0268381
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0253912
EIF1 eukaryotic translation initiation factor 1 0.0245581
SDC4 syndecan 4 0.0245106
KDM3A lysine (K)-specific demethylase 3A 0.0244517
PGAM4 phosphoglycerate mutase family member 4 0.0238082
RPL4 ribosomal protein L4 0.0237362
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0236172
PNISR PNN-interacting serine/arginine-rich protein 0.0230749
BHLHE40 basic helix-loop-helix family, member e40 0.0215744
PUM2 pumilio RNA-binding family member 2 0.0215344
UBA6 ubiquitin-like modifier activating enzyme 6 0.0214223
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.021401
MKI67 marker of proliferation Ki-67 0.0208504
CCNL1 cyclin L1 0.0208263
EZR ezrin 0.0200732
RICTOR RPTOR independent companion of MTOR, complex 2 0.0198527
RNF145 ring finger protein 145 0.0196986
RBM39 RNA binding motif protein 39 0.0188154
RLF rearranged L-myc fusion 0.0187728
NONO non-POU domain containing, octamer-binding 0.0187711
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0185248
TPM3 tropomyosin 3 0.0174988
PHIP pleckstrin homology domain interacting protein 0.0172986
SRRM1 serine/arginine repetitive matrix 1 0.0172481
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0172309
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0171764
TMF1 TATA element modulatory factor 1 0.0166461
GOLGA4 golgin A4 0.0166248
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0165595
SNX3 sorting nexin 3 0.0165139
CENPF centromere protein F, 350/400kDa 0.0163743
CKAP5 cytoskeleton associated protein 5 0.01632
NAP1L1 nucleosome assembly protein 1-like 1 0.0161286
EIF4H eukaryotic translation initiation factor 4H 0.016048
NUP153 nucleoporin 153kDa 0.0160411
SNX2 sorting nexin 2 0.0159076
PTBP3 polypyrimidine tract binding protein 3 0.0158864
NPEPPS aminopeptidase puromycin sensitive 0.0158818
USP37 ubiquitin specific peptidase 37 0.0157411
TEX10 testis expressed 10 0.015636
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0155569
DHFR dihydrofolate reductase 0.0153841
NCKAP1 NCK-associated protein 1 0.0153498
WAC WW domain containing adaptor with coiled-coil 0.0151029
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa 0.0150265
MARCHF6 membrane associated ring-CH-type finger 6 0.0149719
WDR43 WD repeat domain 43 0.0149672
SPAG9 sperm associated antigen 9 0.0149126
SFTPA2 surfactant protein A2 0.0147862
TOP2B topoisomerase (DNA) II beta 180kDa 0.0146757
ARL8B ADP-ribosylation factor-like 8B 0.0145857
TFG TRK-fused gene 0.014508
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0144755
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0144626
NT5C2 5'-nucleotidase, cytosolic II 0.0144519
CHD1 chromodomain helicase DNA binding protein 1 0.0144513
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.014448
PRRC2C proline-rich coiled-coil 2C 0.0143506
PER1 period circadian clock 1 0.0142741
BCLAF1 BCL2-associated transcription factor 1 0.0141889
CD99 CD99 molecule 0.0140784
ZNF292 zinc finger protein 292 0.014064
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0140399
IPMK inositol polyphosphate multikinase 0.0140166
TPD52 tumor protein D52 0.0140125
MIS18BP1 MIS18 binding protein 1 0.0138577
H1-4 H1.4 linker histone, cluster member 0.0138045
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0137998
LCORL ligand dependent nuclear receptor corepressor-like 0.0137526
UBQLN1 ubiquilin 1 0.0136537
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.01363
NGLY1 N-glycanase 1 0.0134882
TNRC6A trinucleotide repeat containing 6A 0.0134472
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0134263
NUP58 nucleoporin 58 0.0131811
NEK7 NIMA-related kinase 7 0.0131753
CREBRF CREB3 regulatory factor 0.0131693

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.192862
SOD2 superoxide dismutase 2, mitochondrial -0.12772
CD44 CD44 molecule (Indian blood group) -0.1221
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.116994
GLIS3 GLIS family zinc finger 3 -0.107277
IGFBP3 insulin-like growth factor binding protein 3 -0.10671
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0979655
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0829796
FRMD4A FERM domain containing 4A -0.0805842
HMGA2 high mobility group AT-hook 2 -0.0787904
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0780324
HLA-B major histocompatibility complex, class I, B -0.077745
EXT1 exostosin glycosyltransferase 1 -0.0762976
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0733804
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0707769
VCL vinculin -0.0702935
AKAP12 A kinase (PRKA) anchor protein 12 -0.0670895
COL6A3 collagen, type VI, alpha 3 -0.0664807
CDH13 cadherin 13 -0.0628465
IER3 immediate early response 3 -0.0623333
PDE10A phosphodiesterase 10A -0.0617491
LDHA lactate dehydrogenase A -0.0614688
BICC1 BicC family RNA binding protein 1 -0.060998
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0562824
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0562147
DIAPH2 diaphanous-related formin 2 -0.0551842
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0547513
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0540833
VCAN versican -0.0535498
FN1 fibronectin 1 -0.0524758
DST dystonin -0.0520678
SDK1 sidekick cell adhesion molecule 1 -0.0509186
PLIN2 perilipin 2 -0.0498673
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0486377
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0483348
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0476489
ATXN1 ataxin 1 -0.0475047
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0458205
HDAC9 histone deacetylase 9 -0.0448523
CANX calnexin -0.0429216
SMYD3 SET and MYND domain containing 3 -0.042018
ENO1 enolase 1, (alpha) -0.0416295
TPM4 tropomyosin 4 -0.0414288
ZBTB20 zinc finger and BTB domain containing 20 -0.0412342
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0412101
ZMYND8 zinc finger, MYND-type containing 8 -0.0402145
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0400041
NAV1 neuron navigator 1 -0.0394958
FNDC3B fibronectin type III domain containing 3B -0.0392772
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0392137
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0381861
RNF213 ring finger protein 213 -0.0379694
GPC6 glypican 6 -0.0373971
EGFR epidermal growth factor receptor -0.0372341
CALR calreticulin -0.0368966
ZBTB38 zinc finger and BTB domain containing 38 -0.036807
TPT1 tumor protein, translationally-controlled 1 -0.036185
RPS24 ribosomal protein S24 -0.0357248
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0355594
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0353813
TNS3 tensin 3 -0.0352949
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0351682
LPP LIM domain containing preferred translocation partner in lipoma -0.0348147
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0347928
FRMPD4 FERM and PDZ domain containing 4 -0.0346498
RAD51B RAD51 paralog B -0.0343785
IFI16 interferon, gamma-inducible protein 16 -0.0338885
NABP1 nucleic acid binding protein 1 -0.0335373
TRIO trio Rho guanine nucleotide exchange factor -0.0325848
TMSB10 thymosin beta 10 -0.0321494
FBXL7 F-box and leucine-rich repeat protein 7 -0.0319473
GOLGB1 golgin B1 -0.0318008
C3 complement component 3 -0.0317865
MORF4L2 mortality factor 4 like 2 -0.0312369
ASPH aspartate beta-hydroxylase -0.0309582
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0307669
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0303711
RPL23 ribosomal protein L23 -0.0303387
ADAM12 ADAM metallopeptidase domain 12 -0.0303089
RPL35A ribosomal protein L35a -0.0299947
KYNU kynureninase -0.0298569
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0295511
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0295235
PTPRK protein tyrosine phosphatase, receptor type, K -0.0294974
PSD3 pleckstrin and Sec7 domain containing 3 -0.0293542
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0288749
SLC38A1 solute carrier family 38, member 1 -0.0288127
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0287167
AHNAK AHNAK nucleoprotein -0.0286501
TPM1 tropomyosin 1 (alpha) -0.0282995
SOX5 SRY (sex determining region Y)-box 5 -0.0282206
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0280895
TMEM132D transmembrane protein 132D -0.0280606
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0275613
INTS6 integrator complex subunit 6 -0.027353
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0271086
AFF3 AF4/FMR2 family, member 3 -0.0270179
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0263422
RIGI RNA sensor RIG-I -0.0261452
IFI6 interferon, alpha-inducible protein 6 -0.0259749