Everolimus_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Everolimus perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Everolimus_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.19835
FTL ferritin, light polypeptide 0.10496
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.101822
RPS12 ribosomal protein S12 0.087903
RPS3 ribosomal protein S3 0.0863744
ZSWIM6 zinc finger, SWIM-type containing 6 0.0767769
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0692714
ENO1 enolase 1, (alpha) 0.0656637
FHIT fragile histidine triad 0.0647506
APLP2 amyloid beta (A4) precursor-like protein 2 0.0606931
SAMD4A sterile alpha motif domain containing 4A 0.056972
RPL37A ribosomal protein L37a 0.0557512
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0556315
DTNA dystrobrevin, alpha 0.0554374
RPL9 ribosomal protein L9 0.0538833
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0527755
RPS8 ribosomal protein S8 0.05258
RACK1 receptor for activated C kinase 1 0.0503928
RPS25 ribosomal protein S25 0.0491732
RPS17 ribosomal protein S17 0.0491304
EXT1 exostosin glycosyltransferase 1 0.0447984
FTH1 ferritin, heavy polypeptide 1 0.0437764
IFI27 interferon, alpha-inducible protein 27 0.0410201
GPBP1 GC-rich promoter binding protein 1 0.0405616
CSNK1A1 casein kinase 1, alpha 1 0.0399045
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0393295
HMGB2 high mobility group box 2 0.0379788
ANKRD17 ankyrin repeat domain 17 0.0378692
MCL1 myeloid cell leukemia 1 0.0373721
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0364415
ALCAM activated leukocyte cell adhesion molecule 0.0362669
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0352589
INTS6 integrator complex subunit 6 0.0351353
RPS2 ribosomal protein S2 0.0345946
LDHA lactate dehydrogenase A 0.0336895
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0335765
RPS13 ribosomal protein S13 0.0331115
RAD51B RAD51 paralog B 0.0320845
PKM pyruvate kinase, muscle 0.0318633
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0318623
UPP1 uridine phosphorylase 1 0.0314512
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0313029
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0312134
PDIA3 protein disulfide isomerase family A, member 3 0.0311581
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0310456
EFNA5 ephrin-A5 0.0297954
VMP1 vacuole membrane protein 1 0.0296092
RPS27A ribosomal protein S27a 0.0294282
RPS27 ribosomal protein S27 0.0290508
KIAA1217 KIAA1217 0.0287992
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0287704
MBNL1 muscleblind-like splicing regulator 1 0.0285557
ARHGAP5 Rho GTPase activating protein 5 0.0283678
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.028355
RPL31 ribosomal protein L31 0.0280651
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0280578
RAB10 RAB10, member RAS oncogene family 0.027994
RPL37 ribosomal protein L37 0.0278744
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0277746
RPLP0 ribosomal protein, large, P0 0.0275612
RPL7A ribosomal protein L7a 0.0270134
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0269822
TBCA tubulin folding cofactor A 0.0269152
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0261966
RPS7 ribosomal protein S7 0.0261012
GLS2 glutaminase 2 (liver, mitochondrial) 0.025809
RPL27 ribosomal protein L27 0.0256088
BRD2 bromodomain containing 2 0.025608
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0255696
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0254452
RPLP2 ribosomal protein, large, P2 0.0252532
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 0.0250365
PPP1R13B protein phosphatase 1, regulatory subunit 13B 0.0250305
RPL15 ribosomal protein L15 0.0249781
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.024974
PALLD palladin, cytoskeletal associated protein 0.0247604
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0244531
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0244011
KDM2A lysine (K)-specific demethylase 2A 0.0243169
CD109 CD109 molecule 0.0240978
RPL7 ribosomal protein L7 0.0240221
HOMER1 homer scaffolding protein 1 0.023933
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0236513
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0232512
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0229498
DHRS7 dehydrogenase/reductase (SDR family) member 7 0.022914
C6ORF62 chromosome 6 open reading frame 62 0.0227814
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0226425
HDAC9 histone deacetylase 9 0.0224616
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0223081
NAP1L1 nucleosome assembly protein 1-like 1 0.022193
RPL13A ribosomal protein L13a 0.0220296
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.021842
HYOU1 hypoxia up-regulated 1 0.0218357
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0217152
RNF213 ring finger protein 213 0.0216092
RPL30 ribosomal protein L30 0.021541
KPNB1 karyopherin (importin) beta 1 0.0213515
RPS16 ribosomal protein S16 0.0213292
PHACTR4 phosphatase and actin regulator 4 0.0211105

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.208177
ACTG1 actin gamma 1 -0.200081
FN1 fibronectin 1 -0.178677
NDRG1 N-myc downstream regulated 1 -0.15652
TMSB10 thymosin beta 10 -0.131643
TMSB4X thymosin beta 4, X-linked -0.109264
TM4SF1 transmembrane 4 L six family member 1 -0.0986613
RPL35A ribosomal protein L35a -0.0979113
LMO7 LIM domain 7 -0.0911002
UBC ubiquitin C -0.0905512
KRT7 keratin 7, type II -0.0854191
S100A10 S100 calcium binding protein A10 -0.0802432
CCND1 cyclin D1 -0.0749716
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0735064
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0734306
IGFBP3 insulin-like growth factor binding protein 3 -0.0723508
NAMPT nicotinamide phosphoribosyltransferase -0.06959
NPEPPS aminopeptidase puromycin sensitive -0.0691956
CD2AP CD2-associated protein -0.0668991
LAMB3 laminin, beta 3 -0.0647035
RPL34 ribosomal protein L34 -0.0645185
FBXO32 F-box protein 32 -0.0607242
POTEF POTE ankyrin domain family, member F -0.05949
ASPH aspartate beta-hydroxylase -0.0569693
LAMC2 laminin, gamma 2 -0.0558927
HMGA1 high mobility group AT-hook 1 -0.0515691
EIF1 eukaryotic translation initiation factor 1 -0.0496979
KDM3A lysine (K)-specific demethylase 3A -0.0475112
LMAN1 lectin, mannose-binding, 1 -0.0471806
LY6E lymphocyte antigen 6 complex, locus E -0.0471547
FAM3C family with sequence similarity 3, member C -0.0469381
MDK midkine (neurite growth-promoting factor 2) -0.0466577
RAD21 RAD21 homolog (S. pombe) -0.0454978
RBM39 RNA binding motif protein 39 -0.0452895
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0449859
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.044743
SOX4 SRY (sex determining region Y)-box 4 -0.0446029
AHNAK AHNAK nucleoprotein -0.0445019
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0426269
DSG2 desmoglein 2 -0.0415569
TSC22D2 TSC22 domain family, member 2 -0.0389953
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0387112
TFG TRK-fused gene -0.0386917
RPL8 ribosomal protein L8 -0.0384411
TMEM263 transmembrane protein 263 -0.0379853
PTMA prothymosin, alpha -0.0361056
RRBP1 ribosome binding protein 1 -0.0360517
PGK1 phosphoglycerate kinase 1 -0.0358796
ARF1 ADP-ribosylation factor 1 -0.035246
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0347508
BASP1 brain abundant, membrane attached signal protein 1 -0.0345657
KRT18 keratin 18, type I -0.0344076
SDC4 syndecan 4 -0.03434
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.034297
MARCHF6 membrane associated ring-CH-type finger 6 -0.0339566
H1-0 H1.0 linker histone -0.0338457
KRT8 keratin 8, type II -0.0336135
LOC112694756 uncharaterized LOC112694756 -0.0332903
RPL32 ribosomal protein L32 -0.0325045
CD63 CD63 molecule -0.0309692
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0299904
KLHL24 kelch-like family member 24 -0.028748
C15ORF48 chromosome 15 open reading frame 48 -0.0282741
TXNRD1 thioredoxin reductase 1 -0.0282495
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0277659
DEK DEK proto-oncogene -0.0273584
EPCAM epithelial cell adhesion molecule -0.0269979
ZFAND6 zinc finger, AN1-type domain 6 -0.0266864
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0265664
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0263261
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0262768
ZNF292 zinc finger protein 292 -0.0262749
TMEM123 transmembrane protein 123 -0.0262642
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0262502
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0258922
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.025413
RPS19 ribosomal protein S19 -0.0253582
FAM162A family with sequence similarity 162, member A -0.0251271
GNAS GNAS complex locus -0.0247765
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0247122
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0239345
ADAM9 ADAM metallopeptidase domain 9 -0.0239066
OSBPL3 oxysterol binding protein-like 3 -0.0237489
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0236721
USP3 ubiquitin specific peptidase 3 -0.0236228
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0232432
YBX3 Y box binding protein 3 -0.023108
MXD1 MAX dimerization protein 1 -0.0229622
ARHGAP29 Rho GTPase activating protein 29 -0.0227963
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0227696
F3 coagulation factor III (thromboplastin, tissue factor) -0.0226371
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.022128
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) -0.0220674
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0220285
UBE2E1 ubiquitin-conjugating enzyme E2E 1 -0.0219597
MORF4L1 mortality factor 4 like 1 -0.0219504
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0218639
DSCAM Down syndrome cell adhesion molecule -0.0217777
ZNF217 zinc finger protein 217 -0.02168
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.02161