Everolimus_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Everolimus perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Everolimus_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 0.140238
HDAC9 histone deacetylase 9 0.108488
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0941248
SRP54 signal recognition particle 54kDa 0.0831521
KMT2E lysine (K)-specific methyltransferase 2E 0.0765712
PCLO piccolo presynaptic cytomatrix protein 0.0731075
RPS8 ribosomal protein S8 0.0712797
JMJD1C jumonji domain containing 1C 0.0676568
KMT2C lysine (K)-specific methyltransferase 2C 0.0662936
ZEB2 zinc finger E-box binding homeobox 2 0.0645462
CADM2 cell adhesion molecule 2 0.0597219
FNDC3A fibronectin type III domain containing 3A 0.058395
PNISR PNN-interacting serine/arginine-rich protein 0.0554512
RPS16 ribosomal protein S16 0.0528688
GPBP1 GC-rich promoter binding protein 1 0.0516023
PRRC2C proline-rich coiled-coil 2C 0.0501217
B2M beta-2-microglobulin 0.0492327
SNX3 sorting nexin 3 0.0486089
CSNK1A1 casein kinase 1, alpha 1 0.0484495
RPL37A ribosomal protein L37a 0.0477459
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0476516
FNDC3B fibronectin type III domain containing 3B 0.0472695
KIF21A kinesin family member 21A 0.0466681
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0460844
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0450256
ISG15 ISG15 ubiquitin-like modifier 0.0449244
APLP2 amyloid beta (A4) precursor-like protein 2 0.0447638
RPS12 ribosomal protein S12 0.0428055
CDC73 cell division cycle 73 0.0407843
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0405349
SNX6 sorting nexin 6 0.0402709
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0402361
CHD1 chromodomain helicase DNA binding protein 1 0.0396891
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0393835
RPL26 ribosomal protein L26 0.0389682
PCDH18 protocadherin 18 0.0385789
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0384811
RPS3 ribosomal protein S3 0.0369947
BRD2 bromodomain containing 2 0.0368954
FOXO1 forkhead box O1 0.0361019
NTM neurotrimin 0.0358536
GLS2 glutaminase 2 (liver, mitochondrial) 0.0358535
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0355992
ITSN2 intersectin 2 0.0351321
HYOU1 hypoxia up-regulated 1 0.0349286
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0348232
GARS1 glycyl-tRNA synthetase 1 0.03454
KDM6A lysine (K)-specific demethylase 6A 0.0345164
RNASEH2A ribonuclease H2, subunit A 0.0344619
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0342101
RPL23 ribosomal protein L23 0.0341531
FMNL2 formin-like 2 0.0336151
ANKRD33B ankyrin repeat domain 33B 0.0333728
PEG10 paternally expressed 10 0.0330843
RPS6 ribosomal protein S6 0.0328233
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0319946
MYO6 myosin VI 0.0315913
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0315803
PLPP1 phospholipid phosphatase 1 0.0315101
VRK2 vaccinia related kinase 2 0.0314848
EEF2 eukaryotic translation elongation factor 2 0.0314122
RPL9 ribosomal protein L9 0.0307357
ZFP36L1 ZFP36 ring finger protein-like 1 0.0306281
IWS1 IWS1 homolog (S. cerevisiae) 0.0305207
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0304012
WWC2 WW and C2 domain containing 2 0.0296464
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 0.0295054
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.029196
LPIN2 lipin 2 0.0291691
PRTG protogenin 0.0291084
ERBIN erbb2 interacting protein 0.0290726
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0286072
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0284551
PRKD1 protein kinase D1 0.0283564
DDIT4 DNA-damage-inducible transcript 4 0.0282604
AKAP9 A kinase (PRKA) anchor protein 9 0.0282058
LAMP2 lysosomal-associated membrane protein 2 0.0281544
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0281222
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0280066
RIMS2 regulating synaptic membrane exocytosis 2 0.0279706
RPS2 ribosomal protein S2 0.0279412
NSD1 nuclear receptor binding SET domain protein 1 0.0277789
CAMTA1 calmodulin binding transcription activator 1 0.0277389
SENP6 SUMO1/sentrin specific peptidase 6 0.0275248
RPS27 ribosomal protein S27 0.0274925
SETD5 SET domain containing 5 0.0272797
ARID1A AT rich interactive domain 1A (SWI-like) 0.027234
MIDEAS mitotic deacetylase associated SANT domain protein 0.0271623
TMEM87A transmembrane protein 87A 0.0270608
MCL1 myeloid cell leukemia 1 0.0270275
YARS1 tyrosyl-tRNA synthetase 1 0.0268567
RANBP9 RAN binding protein 9 0.0268531
WSB1 WD repeat and SOCS box containing 1 0.0267086
TNRC18 trinucleotide repeat containing 18 0.026591
TAOK3 TAO kinase 3 0.0264973
RPL12 ribosomal protein L12 0.0264804
PUM1 pumilio RNA-binding family member 1 0.0264186
CSRNP3 cysteine-serine-rich nuclear protein 3 0.0263662
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0263459
ZCCHC7 zinc finger, CCHC domain containing 7 0.0262335

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.125417
ACTG1 actin gamma 1 -0.124882
DST dystonin -0.107635
TENM3 teneurin transmembrane protein 3 -0.0901077
THBS1 thrombospondin 1 -0.0899681
AHNAK AHNAK nucleoprotein -0.0824871
COL5A2 collagen, type V, alpha 2 -0.0806521
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0783682
NCAM2 neural cell adhesion molecule 2 -0.0681533
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0669432
H1-0 H1.0 linker histone -0.0576202
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0572454
ADGRL2 adhesion G protein-coupled receptor L2 -0.0566874
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0560337
EMP1 epithelial membrane protein 1 -0.0539342
LOC112694756 uncharaterized LOC112694756 -0.0530034
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.052701
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0491255
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0489611
TMSB4X thymosin beta 4, X-linked -0.0478505
TPX2 TPX2, microtubule-associated -0.0477613
MKI67 marker of proliferation Ki-67 -0.0472914
MRPS30 mitochondrial ribosomal protein S30 -0.0471155
KIF4A kinesin family member 4A -0.0460261
CCN2 cellular communication network factor 2 -0.045762
DEK DEK proto-oncogene -0.0452972
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0447366
GPC3 glypican 3 -0.0432548
CENPE centromere protein E, 312kDa -0.0425724
PGK1 phosphoglycerate kinase 1 -0.042063
CENPF centromere protein F, 350/400kDa -0.0414339
PRELID2 PRELI domain containing 2 -0.0404005
COL1A2 collagen, type I, alpha 2 -0.0403157
HMGB1 high mobility group box 1 -0.0401542
ZFPM2 zinc finger protein, FOG family member 2 -0.0398989
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.03956
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase -0.0393012
BPTF bromodomain PHD finger transcription factor -0.0389875
SGO2 shugoshin 2 -0.038704
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0385154
TXNRD1 thioredoxin reductase 1 -0.0384319
RPS21 ribosomal protein S21 -0.0377539
PRR11 proline rich 11 -0.0371694
RAD21 RAD21 homolog (S. pombe) -0.0368921
RTN4 reticulon 4 -0.0363913
SAMD4B sterile alpha motif domain containing 4B -0.0362253
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0360766
HBP1 HMG-box transcription factor 1 -0.0360457
IGF1R insulin-like growth factor 1 receptor -0.0360259
TTK TTK protein kinase -0.0359566
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0349446
PDE4D phosphodiesterase 4D, cAMP-specific -0.0343235
CUL3 cullin 3 -0.0340364
ZNF385D zinc finger protein 385D -0.0337579
UBC ubiquitin C -0.033721
ARHGAP15 Rho GTPase activating protein 15 -0.0332539
IQGAP1 IQ motif containing GTPase activating protein 1 -0.033238
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0332209
FOXP2 forkhead box P2 -0.0331539
PCDH7 protocadherin 7 -0.0330777
RBM39 RNA binding motif protein 39 -0.0323306
RAI1 retinoic acid induced 1 -0.0322451
AGTPBP1 ATP/GTP binding protein 1 -0.0315579
HSPA4 heat shock 70kDa protein 4 -0.0307575
TBC1D22A TBC1 domain family, member 22A -0.0307328
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0306724
SIK2 salt-inducible kinase 2 -0.0304049
VCL vinculin -0.0302993
CDK12 cyclin-dependent kinase 12 -0.0301175
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0300071
DIAPH3 diaphanous-related formin 3 -0.0297604
CHD4 chromodomain helicase DNA binding protein 4 -0.0297359
CABLES1 Cdk5 and Abl enzyme substrate 1 -0.0297259
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.0296721
CXADR coxsackie virus and adenovirus receptor -0.0295756
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0292469
GLI3 GLI family zinc finger 3 -0.0291152
COL3A1 collagen, type III, alpha 1 -0.0288565
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0287787
WDR70 WD repeat domain 70 -0.0286784
RPL35A ribosomal protein L35a -0.0283068
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0280533
NPAS3 neuronal PAS domain protein 3 -0.0279638
PLS3 plastin 3 -0.0279524
TPM4 tropomyosin 4 -0.0279293
HMGA2 high mobility group AT-hook 2 -0.027924
HNRNPL heterogeneous nuclear ribonucleoprotein L -0.0278212
YBX1 Y box binding protein 1 -0.0277239
PARP1 poly (ADP-ribose) polymerase 1 -0.027669
MDK midkine (neurite growth-promoting factor 2) -0.0276585
SPDYA speedy/RINGO cell cycle regulator family member A -0.0276371
EXOC4 exocyst complex component 4 -0.0274807
STAU2 staufen double-stranded RNA binding protein 2 -0.0274683
GOLGB1 golgin B1 -0.0273694
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0273324
FUBP1 far upstream element (FUSE) binding protein 1 -0.0272918
ABI2 abl-interactor 2 -0.0267582
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) -0.0266161
EXOC2 exocyst complex component 2 -0.026599
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.0265386