Everolimus_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Everolimus perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Everolimus_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.217121
PKM pyruvate kinase, muscle 0.0942936
ENO1 enolase 1, (alpha) 0.0850274
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0803939
HDAC9 histone deacetylase 9 0.0744064
RPS8 ribosomal protein S8 0.073937
RPS12 ribosomal protein S12 0.071187
NAP1L1 nucleosome assembly protein 1-like 1 0.0612919
EEF2 eukaryotic translation elongation factor 2 0.058469
RACK1 receptor for activated C kinase 1 0.0570977
DUSP4 dual specificity phosphatase 4 0.0491265
RPS3 ribosomal protein S3 0.0461774
RPL12 ribosomal protein L12 0.0461555
RPL7 ribosomal protein L7 0.0430734
ZNF608 zinc finger protein 608 0.0424752
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0421065
SYNE2 spectrin repeat containing, nuclear envelope 2 0.041672
RPLP0 ribosomal protein, large, P0 0.0414153
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0404356
RPL26 ribosomal protein L26 0.0392187
LDHA lactate dehydrogenase A 0.0385953
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0379731
RPS2 ribosomal protein S2 0.0365616
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0342026
RPL13A ribosomal protein L13a 0.0331063
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0316488
SET SET nuclear proto-oncogene 0.0313349
RPS17 ribosomal protein S17 0.030883
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.030815
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0307376
TUBA1B tubulin, alpha 1b 0.0305282
RPL18 ribosomal protein L18 0.0304789
AHCYL2 adenosylhomocysteinase-like 2 0.0304024
ZEB1 zinc finger E-box binding homeobox 1 0.0296402
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0288354
TRIOBP TRIO and F-actin binding protein 0.0284613
MKI67 marker of proliferation Ki-67 0.0282532
RPS7 ribosomal protein S7 0.0280666
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0278747
TUBB4B tubulin, beta 4B class IVb 0.0275331
ARHGAP5 Rho GTPase activating protein 5 0.0270799
TGFBR3 transforming growth factor, beta receptor III 0.0270233
SRRM2 serine/arginine repetitive matrix 2 0.0270066
PDCD6IP programmed cell death 6 interacting protein 0.0268241
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0266821
PLK2 polo-like kinase 2 0.0265996
CREB5 cAMP responsive element binding protein 5 0.0261289
SOX9 SRY (sex determining region Y)-box 9 0.0249698
ANXA1 annexin A1 0.0247384
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0246295
MATR3 matrin 3 0.0244593
HSPA8 heat shock 70kDa protein 8 0.0243565
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.024286
TPI1 triosephosphate isomerase 1 0.0240667
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0238251
UBE3A ubiquitin protein ligase E3A 0.0230814
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0223764
BZW1 basic leucine zipper and W2 domains 1 0.0221714
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 0.0219309
GPHN gephyrin 0.0212496
JUN jun proto-oncogene 0.0209405
RAB27B RAB27B, member RAS oncogene family 0.0208445
KLF6 Kruppel-like factor 6 0.0205212
MACROD2 MACRO domain containing 2 0.0204469
SERINC1 serine incorporator 1 0.0203871
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.020169
KLF2 Kruppel-like factor 2 0.0200802
TBC1D5 TBC1 domain family, member 5 0.0200662
ITSN2 intersectin 2 0.0198975
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0196529
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0194527
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0193421
CSDE1 cold shock domain containing E1, RNA-binding 0.0190768
DDIT3 DNA-damage-inducible transcript 3 0.0188593
RPL39 ribosomal protein L39 0.0188055
PDLIM5 PDZ and LIM domain 5 0.0187257
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0185433
IGF2R insulin-like growth factor 2 receptor 0.0184369
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0183122
RPS27 ribosomal protein S27 0.0182278
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0182117
RBBP8 retinoblastoma binding protein 8 0.0181457
NFE2L2 nuclear factor, erythroid 2-like 2 0.017871
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 0.0177558
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.0176885
SMC4 structural maintenance of chromosomes 4 0.0176713
LRRC7 leucine rich repeat containing 7 0.0175175
SPRY2 sprouty homolog 2 (Drosophila) 0.0174987
IWS1 IWS1 homolog (S. cerevisiae) 0.0172499
PARD3B par-3 family cell polarity regulator beta 0.017212
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0170596
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) 0.0168235
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.0167884
PUS7 pseudouridylate synthase 7 (putative) 0.0167626
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0167567
ARID1A AT rich interactive domain 1A (SWI-like) 0.0166907
RPL4 ribosomal protein L4 0.0166113
CEP350 centrosomal protein 350kDa 0.0164993
SCFD1 sec1 family domain containing 1 0.0164349
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0160307

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.271406
PTMA prothymosin, alpha -0.140137
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.136925
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.104612
RPL35A ribosomal protein L35a -0.098057
VCL vinculin -0.0898776
RBM39 RNA binding motif protein 39 -0.0894937
ACTG1 actin gamma 1 -0.08662
BMP10 bone morphogenetic protein 10 -0.086342
FOXP1 forkhead box P1 -0.0859226
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0852071
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0828871
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0791023
ZMYND8 zinc finger, MYND-type containing 8 -0.0741336
SLC38A2 solute carrier family 38, member 2 -0.0688989
EVI5 ecotropic viral integration site 5 -0.0629021
RPS19 ribosomal protein S19 -0.060314
NBEA neurobeachin -0.0586762
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0585985
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0559552
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.05594
FNDC3B fibronectin type III domain containing 3B -0.0538933
NFIA nuclear factor I/A -0.053817
POTEF POTE ankyrin domain family, member F -0.0535273
RPS23 ribosomal protein S23 -0.052336
DLG1 discs, large homolog 1 (Drosophila) -0.0517379
DPYD dihydropyrimidine dehydrogenase -0.0507331
PFN1 profilin 1 -0.0488344
ADNP activity-dependent neuroprotector homeobox -0.0473135
ZBTB20 zinc finger and BTB domain containing 20 -0.046798
TMSB10 thymosin beta 10 -0.0442288
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0439418
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0438832
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0436038
WSB1 WD repeat and SOCS box containing 1 -0.0435996
TNRC6B trinucleotide repeat containing 6B -0.0424171
TMSB4X thymosin beta 4, X-linked -0.0421273
SOX6 SRY (sex determining region Y)-box 6 -0.0409972
ARF4 ADP-ribosylation factor 4 -0.0406171
RPS29 ribosomal protein S29 -0.0402162
EGFR epidermal growth factor receptor -0.040211
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0394037
TJP1 tight junction protein 1 -0.0391396
HLA-B major histocompatibility complex, class I, B -0.0390877
NEBL nebulette -0.0389595
FLNB filamin B, beta -0.0378188
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.037243
RPL34 ribosomal protein L34 -0.0369492
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.03649
AHNAK AHNAK nucleoprotein -0.0362823
EXT1 exostosin glycosyltransferase 1 -0.0361657
PARD3 par-3 family cell polarity regulator -0.0359218
GNAS GNAS complex locus -0.0356604
VIM vimentin -0.0354043
PATJ PATJ crumbs cell polarity complex component -0.0354005
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0353875
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.035118
TBC1D22A TBC1 domain family, member 22A -0.034868
FBXO11 F-box protein 11 -0.0344065
IGF1R insulin-like growth factor 1 receptor -0.034285
CAMTA1 calmodulin binding transcription activator 1 -0.0340785
S100A10 S100 calcium binding protein A10 -0.0339991
LMAN1 lectin, mannose-binding, 1 -0.0339768
UBC ubiquitin C -0.0338486
BTBD9 BTB (POZ) domain containing 9 -0.03379
QKI QKI, KH domain containing, RNA binding -0.0332844
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0330591
BIRC6 baculoviral IAP repeat containing 6 -0.0326245
HEG1 heart development protein with EGF-like domains 1 -0.0322689
TFG TRK-fused gene -0.0318023
TRA2A transformer 2 alpha homolog (Drosophila) -0.0316667
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0313785
FUS FUS RNA binding protein -0.031321
KDM3A lysine (K)-specific demethylase 3A -0.0311645
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0310517
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0309152
RICTOR RPTOR independent companion of MTOR, complex 2 -0.030875
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0307841
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0302429
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0298224
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0298117
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0298017
NF1 neurofibromin 1 -0.0294549
EFNA5 ephrin-A5 -0.0293259
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0291894
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0286887
LCORL ligand dependent nuclear receptor corepressor-like -0.028525
NBAS neuroblastoma amplified sequence -0.0283863
EIF1 eukaryotic translation initiation factor 1 -0.0283338
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0280318
DOCK1 dedicator of cytokinesis 1 -0.0280097
EXOC6B exocyst complex component 6B -0.0279541
OGA O-GlcNAcase -0.0278477
PCBP2 poly(rC) binding protein 2 -0.0278332
WAC WW domain containing adaptor with coiled-coil -0.0277843
FOXJ3 forkhead box J3 -0.0276277
TOP2B topoisomerase (DNA) II beta 180kDa -0.0275902
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0275722
NAMPT nicotinamide phosphoribosyltransferase -0.0275529
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0273594