Everolimus_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Everolimus perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Everolimus_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.158911
FTH1 ferritin, heavy polypeptide 1 0.11511
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0889154
TGFBI transforming growth factor, beta-induced, 68kDa 0.0772691
LDHA lactate dehydrogenase A 0.071122
RUNX1 runt-related transcription factor 1 0.0671435
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0657501
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.063883
ENO1 enolase 1, (alpha) 0.0618098
NAMPT nicotinamide phosphoribosyltransferase 0.060068
HMGA2 high mobility group AT-hook 2 0.059569
ZBTB20 zinc finger and BTB domain containing 20 0.0564826
HILPDA hypoxia inducible lipid droplet-associated 0.0540455
IGFBP7 insulin-like growth factor binding protein 7 0.0537153
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0534996
ERRFI1 ERBB receptor feedback inhibitor 1 0.0521059
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0498378
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.049074
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0478008
FNDC3B fibronectin type III domain containing 3B 0.047505
ECE1 endothelin converting enzyme 1 0.0439958
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.043969
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0432907
COL6A2 collagen, type VI, alpha 2 0.043251
RNF145 ring finger protein 145 0.0430901
IQGAP1 IQ motif containing GTPase activating protein 1 0.0429397
TTC3 tetratricopeptide repeat domain 3 0.04287
HYOU1 hypoxia up-regulated 1 0.0425276
RPS8 ribosomal protein S8 0.0425248
CSNK1A1 casein kinase 1, alpha 1 0.0423555
PRELID2 PRELI domain containing 2 0.0422886
KMT2E lysine (K)-specific methyltransferase 2E 0.04228
FNDC3A fibronectin type III domain containing 3A 0.0414695
FTL ferritin, light polypeptide 0.0413146
RPL37A ribosomal protein L37a 0.041042
ATP13A3 ATPase type 13A3 0.0408682
VEGFA vascular endothelial growth factor A 0.0405069
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0404378
CALD1 caldesmon 1 0.0399875
ZNF395 zinc finger protein 395 0.0392701
GOLGA4 golgin A4 0.039209
KYNU kynureninase 0.0384961
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0382662
SNX13 sorting nexin 13 0.037902
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0377366
PKM pyruvate kinase, muscle 0.0376948
FAM13A family with sequence similarity 13, member A 0.0375883
BACE2 beta-site APP-cleaving enzyme 2 0.0374875
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0374139
PDIA3 protein disulfide isomerase family A, member 3 0.0372989
ANKRD11 ankyrin repeat domain 11 0.0368074
RNF24 ring finger protein 24 0.0367833
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0366297
ZMIZ1 zinc finger, MIZ-type containing 1 0.0362915
IL6ST interleukin 6 signal transducer 0.0360246
STC1 stanniocalcin 1 0.0357911
SRRM2 serine/arginine repetitive matrix 2 0.0355216
VIM vimentin 0.0351623
CADM1 cell adhesion molecule 1 0.0351519
RPS6 ribosomal protein S6 0.0350385
RYBP RING1 and YY1 binding protein 0.0348043
IRAK2 interleukin-1 receptor-associated kinase 2 0.0337489
RARS1 arginyl-tRNA synthetase 1 0.0325079
B2M beta-2-microglobulin 0.0323353
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0319625
MMP2 matrix metallopeptidase 2 0.0316956
ZCCHC7 zinc finger, CCHC domain containing 7 0.0315932
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0315343
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0307146
GOLGB1 golgin B1 0.0306452
RACK1 receptor for activated C kinase 1 0.030166
MCFD2 multiple coagulation factor deficiency 2 0.0300358
RPL26 ribosomal protein L26 0.0299613
BBX bobby sox homolog (Drosophila) 0.0297782
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0296983
TRIO trio Rho guanine nucleotide exchange factor 0.029642
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0295916
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.0294964
RPL23 ribosomal protein L23 0.029282
VMP1 vacuole membrane protein 1 0.0292158
CSDE1 cold shock domain containing E1, RNA-binding 0.0291658
LOC102724023 ES1 protein homolog, mitochondrial 0.0291016
SYNJ2 synaptojanin 2 0.0288952
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0288445
TPT1 tumor protein, translationally-controlled 1 0.0286624
MYLK myosin light chain kinase 0.0285586
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.0285539
PGM3 phosphoglucomutase 3 0.0284487
WNT5A wingless-type MMTV integration site family, member 5A 0.0282775
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0282156
ITCH itchy E3 ubiquitin protein ligase 0.0279308
RIN2 Ras and Rab interactor 2 0.0277726
RPS3 ribosomal protein S3 0.0274148
ZMYM2 zinc finger, MYM-type 2 0.0272861
RPS17 ribosomal protein S17 0.027259
RPL5 ribosomal protein L5 0.0268415
CYLD cylindromatosis (turban tumor syndrome) 0.0265923
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.026585
NKTR natural killer cell triggering receptor 0.0264971
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0261976

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.410469
COL6A3 collagen, type VI, alpha 3 -0.164486
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.113487
COL1A1 collagen, type I, alpha 1 -0.110599
COL1A2 collagen, type I, alpha 2 -0.103898
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.103153
FN1 fibronectin 1 -0.0976586
TMSB10 thymosin beta 10 -0.0687617
UBC ubiquitin C -0.0683606
CDH13 cadherin 13 -0.0606526
POTEF POTE ankyrin domain family, member F -0.0570309
AHNAK AHNAK nucleoprotein -0.0555555
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0529581
LOXL2 lysyl oxidase-like 2 -0.0516632
LMAN1 lectin, mannose-binding, 1 -0.0515751
SDC4 syndecan 4 -0.0509677
HLA-B major histocompatibility complex, class I, B -0.0508178
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0496076
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0491792
PDIA4 protein disulfide isomerase family A, member 4 -0.047501
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0467475
VCL vinculin -0.0464226
HLA-C major histocompatibility complex, class I, C -0.0457123
PTMA prothymosin, alpha -0.0456874
OGA O-GlcNAcase -0.0448893
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0441716
PDE4D phosphodiesterase 4D, cAMP-specific -0.042951
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.040419
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0403189
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0386166
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0376808
LOX lysyl oxidase -0.0372687
CANX calnexin -0.036246
F3 coagulation factor III (thromboplastin, tissue factor) -0.0347616
MYOF myoferlin -0.0346976
S100A10 S100 calcium binding protein A10 -0.0345017
PDE10A phosphodiesterase 10A -0.0340445
COL7A1 collagen, type VII, alpha 1 -0.0335916
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0322902
ZNF217 zinc finger protein 217 -0.0310426
COL5A2 collagen, type V, alpha 2 -0.0309894
NAV1 neuron navigator 1 -0.0307692
COL3A1 collagen, type III, alpha 1 -0.030498
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.0303727
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.029314
TM4SF1 transmembrane 4 L six family member 1 -0.0289513
CENPF centromere protein F, 350/400kDa -0.0288686
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0282693
TFG TRK-fused gene -0.0281505
TPX2 TPX2, microtubule-associated -0.0281492
HDAC8 histone deacetylase 8 -0.0281147
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0280468
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0278278
RBM39 RNA binding motif protein 39 -0.0277505
NABP1 nucleic acid binding protein 1 -0.0272741
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0271692
GARS1 glycyl-tRNA synthetase 1 -0.0269678
EMP1 epithelial membrane protein 1 -0.0267843
ARF1 ADP-ribosylation factor 1 -0.02646
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0261627
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0260732
AKAP12 A kinase (PRKA) anchor protein 12 -0.0260411
LOC112694756 uncharaterized LOC112694756 -0.0259294
MT1X metallothionein 1X -0.0249235
CCNI cyclin I -0.0247945
RAD51B RAD51 paralog B -0.0247198
HBP1 HMG-box transcription factor 1 -0.0243202
SEC24D SEC24 family member D -0.0243025
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0231289
TUBB tubulin, beta class I -0.0231233
ACTG1 actin gamma 1 -0.0230272
IARS1 isoleucyl-tRNA synthetase 1 -0.0228562
RHEB Ras homolog enriched in brain -0.0227651
CST3 cystatin C -0.0226777
GLG1 golgi glycoprotein 1 -0.0226519
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0224305
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -0.0224175
RHOA ras homolog family member A -0.0220263
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0218229
NT5C2 5'-nucleotidase, cytosolic II -0.0217886
LARP1 La ribonucleoprotein domain family, member 1 -0.0216677
SUCO SUN domain containing ossification factor -0.0214548
RSRC2 arginine/serine-rich coiled-coil 2 -0.0213996
TLK1 tousled-like kinase 1 -0.0213498
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0213161
CD109 CD109 molecule -0.0211415
EIF1 eukaryotic translation initiation factor 1 -0.0211388
TMSB4X thymosin beta 4, X-linked -0.021066
ADAM10 ADAM metallopeptidase domain 10 -0.0209076
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 -0.0206931
THY1 Thy-1 cell surface antigen -0.0206746
RPL35A ribosomal protein L35a -0.0204897
INHBA inhibin, beta A -0.0204837
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 -0.0203642
FAM177A1 family with sequence similarity 177, member A1 -0.0203241
IL6 interleukin 6 -0.020318
RASAL2 RAS protein activator like 2 -0.0202025
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0200826
CTSB cathepsin B -0.0199549
BIRC6 baculoviral IAP repeat containing 6 -0.0199494