Fedratinib (hydrochloride hydrate)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fedratinib (hydrochloride hydrate) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fedratinib (hydrochloride hydrate)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 0.119333
INTS6 integrator complex subunit 6 0.0914757
ZSWIM6 zinc finger, SWIM-type containing 6 0.0907668
DSPP dentin sialophosphoprotein 0.0898718
LMO7 LIM domain 7 0.0863387
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0770124
POTEF POTE ankyrin domain family, member F 0.0641134
LDHA lactate dehydrogenase A 0.0620933
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0611747
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0589241
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0524826
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0524215
EIF4A2 eukaryotic translation initiation factor 4A2 0.0509161
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0498427
PDLIM5 PDZ and LIM domain 5 0.0477094
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0464598
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0454462
PCBP2 poly(rC) binding protein 2 0.0450779
PTPRB protein tyrosine phosphatase, receptor type, B 0.0445194
CATSPERB catsper channel auxiliary subunit beta 0.0444082
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0433735
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0423295
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0416997
GMDS GDP-mannose 4,6-dehydratase 0.0415186
ZCCHC7 zinc finger, CCHC domain containing 7 0.0389167
SQSTM1 sequestosome 1 0.0375252
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0373151
ASPH aspartate beta-hydroxylase 0.0372616
CALB1 calbindin 1, 28kDa 0.0363066
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0356585
FRMD5 FERM domain containing 5 0.0354183
NABP1 nucleic acid binding protein 1 0.0352422
CANX calnexin 0.0345799
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0343416
LRRC23 leucine rich repeat containing 23 0.0337513
MYO1E myosin IE 0.0337354
GLS2 glutaminase 2 (liver, mitochondrial) 0.0326535
ITPRID2 ITPR interacting domain containing 2 0.0316906
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0316301
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0311836
KRT8 keratin 8, type II 0.0307189
VMP1 vacuole membrane protein 1 0.0293747
RCOR1 REST corepressor 1 0.0292459
EXT1 exostosin glycosyltransferase 1 0.0288322
UBAP2 ubiquitin associated protein 2 0.028503
HSPA8 heat shock 70kDa protein 8 0.0283048
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0280317
APLP2 amyloid beta (A4) precursor-like protein 2 0.0279968
FNIP1 folliculin interacting protein 1 0.0276529
EZR ezrin 0.0275074
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.0274691
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0273143
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0266589
CCNYL1 cyclin Y-like 1 0.0259658
ADIPOR2 adiponectin receptor 2 0.0258558
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0256563
TMF1 TATA element modulatory factor 1 0.025597
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0255385
PLK2 polo-like kinase 2 0.0253727
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0250122
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0247003
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.024645
MPRIP myosin phosphatase Rho interacting protein 0.0245611
SKP1 S-phase kinase-associated protein 1 0.0244964
PEAK1 pseudopodium-enriched atypical kinase 1 0.024285
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0240568
MYO5B myosin VB 0.0238562
IFRD1 interferon-related developmental regulator 1 0.0238143
UBC ubiquitin C 0.0236855
ERRFI1 ERBB receptor feedback inhibitor 1 0.0235514
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0233413
AEBP2 AE binding protein 2 0.0227491
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0226455
MYH14 myosin, heavy chain 14, non-muscle 0.0221346
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0220679
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0219618
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0216358
FBXO11 F-box protein 11 0.0213948
LARP1B La ribonucleoprotein domain family, member 1B 0.0213522
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0213231
SNX14 sorting nexin 14 0.0211443
IRF1 interferon regulatory factor 1 0.0209297
ENO1 enolase 1, (alpha) 0.0209008
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0208832
PGM3 phosphoglucomutase 3 0.0208827
MLEC malectin 0.0208047
BRD2 bromodomain containing 2 0.0208035
FXR1 fragile X mental retardation, autosomal homolog 1 0.0207283
MCL1 myeloid cell leukemia 1 0.0203842
TMED2 transmembrane emp24 domain trafficking protein 2 0.0202643
HDLBP high density lipoprotein binding protein 0.0198623
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0197405
ATF3 activating transcription factor 3 0.0196258
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0193979
MSH4 mutS homolog 4 0.0193653
EIF1 eukaryotic translation initiation factor 1 0.0192866
COPB1 coatomer protein complex, subunit beta 1 0.0192719
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0192526
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0189339
ARRDC3 arrestin domain containing 3 0.0188879

decreased expression

Symbol Name Standardized Value
RPLP1 ribosomal protein, large, P1 -0.11065
PKP2 plakophilin 2 -0.0757747
THSD4 thrombospondin, type I, domain containing 4 -0.0750821
TMSB10 thymosin beta 10 -0.0740583
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.073448
PDE4D phosphodiesterase 4D, cAMP-specific -0.0708816
PRSS3 protease, serine, 3 -0.0676858
PTPRR protein tyrosine phosphatase, receptor type, R -0.0666221
TXNRD1 thioredoxin reductase 1 -0.0622829
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0612301
WWC1 WW and C2 domain containing 1 -0.0566666
FOXO1 forkhead box O1 -0.0566663
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0537073
FLNB filamin B, beta -0.0487705
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0477879
FOXP1 forkhead box P1 -0.0464503
ABHD17C abhydrolase domain containing 17C -0.0456601
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.045248
RRBP1 ribosome binding protein 1 -0.0445855
PLAC8 placenta-specific 8 -0.0437816
PCDHB16 protocadherin beta 16 -0.0403824
SH3RF2 SH3 domain containing ring finger 2 -0.0398112
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0392968
RPS19 ribosomal protein S19 -0.0391744
RPS24 ribosomal protein S24 -0.0389268
TRIM2 tripartite motif containing 2 -0.0371757
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0369147
P3H2 prolyl 3-hydroxylase 2 -0.0366671
SHROOM3 shroom family member 3 -0.0361789
ETV6 ets variant 6 -0.0360293
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0353269
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0352961
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0349027
RPLP2 ribosomal protein, large, P2 -0.034432
ATP10B ATPase, class V, type 10B -0.0343508
PDE8A phosphodiesterase 8A -0.034293
TNRC18 trinucleotide repeat containing 18 -0.0338924
RIGI RNA sensor RIG-I -0.0338199
RPL34 ribosomal protein L34 -0.0334297
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.0333202
RPS6 ribosomal protein S6 -0.0327486
ANXA11 annexin A11 -0.0326203
PPARG peroxisome proliferator-activated receptor gamma -0.0325213
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0322423
UBE2H ubiquitin-conjugating enzyme E2H -0.0320394
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0319489
RPS21 ribosomal protein S21 -0.0319057
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0307331
MX2 MX dynamin-like GTPase 2 -0.0305347
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0301846
PRELID2 PRELI domain containing 2 -0.0301014
RFX7 regulatory factor X, 7 -0.0299269
RAP1B RAP1B, member of RAS oncogene family -0.0295165
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0293302
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) -0.0292397
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0291828
FERMT1 fermitin family member 1 -0.0291747
BCL2L1 BCL2-like 1 -0.0288291
AVL9 AVL9 homolog (S. cerevisiase) -0.0287562
RPS23 ribosomal protein S23 -0.028744
NF1 neurofibromin 1 -0.0286433
WARS1 tryptophanyl-tRNA synthetase 1 -0.0283886
TLN2 talin 2 -0.0282388
TCF12 transcription factor 12 -0.0277964
KLF3 Kruppel-like factor 3 (basic) -0.0274668
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0272195
ETNK1 ethanolamine kinase 1 -0.0271973
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0271334
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0270873
PTEN phosphatase and tensin homolog -0.0260587
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.026033
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0257692
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0256836
TSPAN8 tetraspanin 8 -0.0256704
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0256413
RNF213 ring finger protein 213 -0.0255562
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0254995
MX1 MX dynamin-like GTPase 1 -0.0251471
PTPRG protein tyrosine phosphatase, receptor type, G -0.0250217
MYO1D myosin ID -0.0249629
RNF145 ring finger protein 145 -0.0243346
CARD16 caspase recruitment domain family, member 16 -0.023869
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0238155
SPATS2L spermatogenesis associated, serine-rich 2-like -0.023393
FAT1 FAT atypical cadherin 1 -0.0231978
AOPEP aminopeptidase O (putative) -0.0230875
PLSCR1 phospholipid scramblase 1 -0.0229616
IFI6 interferon, alpha-inducible protein 6 -0.0228892
RPL37A ribosomal protein L37a -0.0228342
KDM7A lysine (K)-specific demethylase 7A -0.0225602
ZFAND3 zinc finger, AN1-type domain 3 -0.022524
RPL35A ribosomal protein L35a -0.0224783
SH3RF1 SH3 domain containing ring finger 1 -0.0222683
SCAF11 SR-related CTD-associated factor 11 -0.022041
NT5C2 5'-nucleotidase, cytosolic II -0.0219054
ANKRD28 ankyrin repeat domain 28 -0.0218792
DSG4 desmoglein 4 -0.0218138
NCOA7 nuclear receptor coactivator 7 -0.0217671
RBM47 RNA binding motif protein 47 -0.0216331
MKI67 marker of proliferation Ki-67 -0.0216178