Fedratinib (hydrochloride hydrate)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fedratinib (hydrochloride hydrate) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fedratinib (hydrochloride hydrate)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.231221
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.214981
PABPC1 poly(A) binding protein, cytoplasmic 1 0.209881
TFPI2 tissue factor pathway inhibitor 2 0.12557
EEF2 eukaryotic translation elongation factor 2 0.102551
CSDE1 cold shock domain containing E1, RNA-binding 0.0989807
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0979455
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0933289
YBX3 Y box binding protein 3 0.0816151
OGA O-GlcNAcase 0.0790415
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0767638
TPM3 tropomyosin 3 0.076677
AKAP12 A kinase (PRKA) anchor protein 12 0.0723933
XPO1 exportin 1 0.0707012
RTN4 reticulon 4 0.0674533
KDM2A lysine (K)-specific demethylase 2A 0.0666604
MARCHF4 membrane associated ring-CH-type finger 4 0.0664335
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.063798
KTN1 kinectin 1 (kinesin receptor) 0.0615529
ACTG1 actin gamma 1 0.0567715
ERRFI1 ERBB receptor feedback inhibitor 1 0.0556641
TRIO trio Rho guanine nucleotide exchange factor 0.0549938
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0544214
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0539879
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0533524
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.052792
NCAPD2 non-SMC condensin I complex, subunit D2 0.0525731
ENO1 enolase 1, (alpha) 0.0515944
PCBP2 poly(rC) binding protein 2 0.0514378
PGK1 phosphoglycerate kinase 1 0.0506035
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0503319
ADAR adenosine deaminase, RNA-specific 0.0500338
TPI1 triosephosphate isomerase 1 0.0473311
PHIP pleckstrin homology domain interacting protein 0.0471111
JMJD1C jumonji domain containing 1C 0.0462558
CCNL1 cyclin L1 0.0459134
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0456123
COPA coatomer protein complex, subunit alpha 0.0454583
CLTC clathrin, heavy chain (Hc) 0.043831
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0435874
IPO7 importin 7 0.0435101
NIPBL Nipped-B homolog (Drosophila) 0.0431979
WNK1 WNK lysine deficient protein kinase 1 0.0426588
BZW1 basic leucine zipper and W2 domains 1 0.0426072
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0413257
KDM3A lysine (K)-specific demethylase 3A 0.0411136
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.040973
EIF4B eukaryotic translation initiation factor 4B 0.0407334
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0405221
TM4SF1 transmembrane 4 L six family member 1 0.0396318
GPHN gephyrin 0.0389983
ANO6 anoctamin 6 0.0388129
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0386079
ATXN2 ataxin 2 0.0383732
KIF5B kinesin family member 5B 0.0382171
GRAMD1B GRAM domain containing 1B 0.0375198
VMP1 vacuole membrane protein 1 0.0369409
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0361298
ADAM17 ADAM metallopeptidase domain 17 0.036017
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0358666
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0354058
NCKAP1 NCK-associated protein 1 0.034857
CTTNBP2NL CTTNBP2 N-terminal like 0.0347099
TRIP12 thyroid hormone receptor interactor 12 0.0345212
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0342567
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0342146
PPME1 protein phosphatase methylesterase 1 0.0341597
SINHCAF SIN3-HDAC complex associated factor 0.033956
CSNK1A1 casein kinase 1, alpha 1 0.0337205
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0331582
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0331242
MATR3 matrin 3 0.0328949
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0328771
SET SET nuclear proto-oncogene 0.0327418
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0325062
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0324594
RAB10 RAB10, member RAS oncogene family 0.0320201
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0319878
ZNF638 zinc finger protein 638 0.031803
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0317843
RRM2 ribonucleotide reductase M2 0.0315189
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0314458
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0314326
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0313471
RLF rearranged L-myc fusion 0.031336
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0312944
RB1CC1 RB1-inducible coiled-coil 1 0.0305704
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0303533
GOLGA4 golgin A4 0.0301945
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0301543
WDR45B WD repeat domain 45B 0.030132
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0301257
ZNF292 zinc finger protein 292 0.0298412
KPNB1 karyopherin (importin) beta 1 0.0296463
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0295934
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0295733
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0294107
CEP192 centrosomal protein 192kDa 0.0293268
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0290262
KMT2C lysine (K)-specific methyltransferase 2C 0.0290192

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0849313
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0752405
THSD4 thrombospondin, type I, domain containing 4 -0.0669137
PTMA prothymosin, alpha -0.0642579
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0565244
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.047674
RPL35A ribosomal protein L35a -0.0457169
HLA-B major histocompatibility complex, class I, B -0.0426124
HMGA2 high mobility group AT-hook 2 -0.0423034
AFF3 AF4/FMR2 family, member 3 -0.0414835
PDE10A phosphodiesterase 10A -0.039327
RYR3 ryanodine receptor 3 -0.0384219
PRH1 proline-rich protein HaeIII subfamily 1 -0.0381305
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0366708
RPS29 ribosomal protein S29 -0.0362347
RIMS2 regulating synaptic membrane exocytosis 2 -0.0360741
IFI6 interferon, alpha-inducible protein 6 -0.0359003
NCOA7 nuclear receptor coactivator 7 -0.033995
RPS8 ribosomal protein S8 -0.0332739
RPL34 ribosomal protein L34 -0.0330116
FNDC3B fibronectin type III domain containing 3B -0.0317149
ATXN1 ataxin 1 -0.0315884
AEBP2 AE binding protein 2 -0.0311404
TPT1 tumor protein, translationally-controlled 1 -0.0310398
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.029071
RPS19 ribosomal protein S19 -0.0280994
RPL36 ribosomal protein L36 -0.028092
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0276528
VIM vimentin -0.0274013
WNT2B wingless-type MMTV integration site family, member 2B -0.0239296
OSMR oncostatin M receptor -0.0233827
S100A10 S100 calcium binding protein A10 -0.0228504
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0226132
CUX1 cut-like homeobox 1 -0.0224348
RPL38 ribosomal protein L38 -0.022324
RPLP1 ribosomal protein, large, P1 -0.0216915
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.021657
RPL37A ribosomal protein L37a -0.0215037
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0213781
RPL31 ribosomal protein L31 -0.0211068
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0210297
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0209685
EPAS1 endothelial PAS domain protein 1 -0.0207553
CALR calreticulin -0.0205628
IER3 immediate early response 3 -0.0203531
WWOX WW domain containing oxidoreductase -0.0203178
NEK10 NIMA-related kinase 10 -0.0203119
MARCKS myristoylated alanine-rich protein kinase C substrate -0.020229
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0201454
INTS6 integrator complex subunit 6 -0.0197747
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0193922
PDLIM5 PDZ and LIM domain 5 -0.019173
RPS27 ribosomal protein S27 -0.0190121
RPS3 ribosomal protein S3 -0.0186145
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0182365
RPS24 ribosomal protein S24 -0.0181925
RPLP2 ribosomal protein, large, P2 -0.0181783
LOXL2 lysyl oxidase-like 2 -0.0181495
LRRC23 leucine rich repeat containing 23 -0.017897
RPS15 ribosomal protein S15 -0.0178662
RPS17 ribosomal protein S17 -0.0178416
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0176427
MSRB3 methionine sulfoxide reductase B3 -0.0171494
RPS10 ribosomal protein S10 -0.0169375
PRKCE protein kinase C, epsilon -0.0167808
RPS13 ribosomal protein S13 -0.0167583
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0163299
FHIT fragile histidine triad -0.0162294
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.015989
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0159464
NLGN1 neuroligin 1 -0.0159176
RPS21 ribosomal protein S21 -0.0158946
TRIM59 tripartite motif containing 59 -0.0156302
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0155568
MAGT1 magnesium transporter 1 -0.0154285
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0154106
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0153215
TPM1 tropomyosin 1 (alpha) -0.0152987
STYK1 serine/threonine/tyrosine kinase 1 -0.0152897
IFIH1 interferon induced with helicase C domain 1 -0.0151823
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0151646
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial -0.0151588
DNAH14 dynein, axonemal, heavy chain 14 -0.015052
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0149723
RPS25 ribosomal protein S25 -0.0149286
RSU1 Ras suppressor protein 1 -0.0147916
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0147186
DOCK1 dedicator of cytokinesis 1 -0.0145351
TPM2 tropomyosin 2 (beta) -0.0144623
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0143682
RPS27A ribosomal protein S27a -0.0142792
RPL28 ribosomal protein L28 -0.0142729
PCNX4 pecanex 4 -0.0142052
RPL9 ribosomal protein L9 -0.0138569
RPS14 ribosomal protein S14 -0.0138496
GPC6 glypican 6 -0.0138355
EGFR epidermal growth factor receptor -0.0136554
PDE4D phosphodiesterase 4D, cAMP-specific -0.0133137
PRELID2 PRELI domain containing 2 -0.0133102
SCFD2 sec1 family domain containing 2 -0.0132616