Fedratinib (hydrochloride hydrate)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fedratinib (hydrochloride hydrate) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fedratinib (hydrochloride hydrate)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.120708
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.116366
STC1 stanniocalcin 1 0.114684
PGK1 phosphoglycerate kinase 1 0.104501
MT2A metallothionein 2A 0.103775
GOLGA4 golgin A4 0.102563
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0877395
ZNF292 zinc finger protein 292 0.0839589
PABPC1 poly(A) binding protein, cytoplasmic 1 0.067806
POTEF POTE ankyrin domain family, member F 0.0612111
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0605162
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0565885
LDHA lactate dehydrogenase A 0.0563594
KMT2E lysine (K)-specific methyltransferase 2E 0.0530497
DSCAM Down syndrome cell adhesion molecule 0.0523776
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0500551
PKM pyruvate kinase, muscle 0.0484088
UBA6 ubiquitin-like modifier activating enzyme 6 0.0481401
MYH9 myosin, heavy chain 9, non-muscle 0.0455869
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.045413
NDRG1 N-myc downstream regulated 1 0.0452938
SDC4 syndecan 4 0.0450366
ESYT2 extended synaptotagmin-like protein 2 0.0442504
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0436027
SMC4 structural maintenance of chromosomes 4 0.0432988
XPO1 exportin 1 0.0430893
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0422538
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.042131
OGA O-GlcNAcase 0.0419124
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0414611
RBM39 RNA binding motif protein 39 0.0412257
ANLN anillin, actin binding protein 0.0406055
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0403714
ENO1 enolase 1, (alpha) 0.0398614
CD109 CD109 molecule 0.0391907
RNMT RNA (guanine-7-) methyltransferase 0.0390637
SNAP25 synaptosomal-associated protein, 25kDa 0.0386003
KDM2A lysine (K)-specific demethylase 2A 0.0384607
HMGB2 high mobility group box 2 0.0378646
TPM3 tropomyosin 3 0.0376833
CENPF centromere protein F, 350/400kDa 0.0375659
FXR1 fragile X mental retardation, autosomal homolog 1 0.0371551
RTN4 reticulon 4 0.0369849
TPX2 TPX2, microtubule-associated 0.0368002
AKAP9 A kinase (PRKA) anchor protein 9 0.0367007
FAM162A family with sequence similarity 162, member A 0.0364837
SRP54 signal recognition particle 54kDa 0.0361921
EEF2 eukaryotic translation elongation factor 2 0.036062
SETD5 SET domain containing 5 0.0360059
MSN moesin 0.0351017
TMF1 TATA element modulatory factor 1 0.0349252
SEPTIN7 septin 7 0.0345938
PCBP2 poly(rC) binding protein 2 0.0337382
COPA coatomer protein complex, subunit alpha 0.0336897
ADAM17 ADAM metallopeptidase domain 17 0.0335744
NUP58 nucleoporin 58 0.0335166
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0332187
RPS6 ribosomal protein S6 0.0323993
DSTN destrin (actin depolymerizing factor) 0.0322915
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0319708
HELZ helicase with zinc finger 0.0318282
GARS1 glycyl-tRNA synthetase 1 0.0314012
LOC112694756 uncharaterized LOC112694756 0.0313249
RLF rearranged L-myc fusion 0.0309989
FAM13A family with sequence similarity 13, member A 0.030946
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0309298
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0308825
MAP2K1 mitogen-activated protein kinase kinase 1 0.0308225
TFG TRK-fused gene 0.0307871
INSIG2 insulin induced gene 2 0.0304827
VEGFA vascular endothelial growth factor A 0.0304043
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0302282
RB1CC1 RB1-inducible coiled-coil 1 0.0301932
PUM2 pumilio RNA-binding family member 2 0.0300866
RNF24 ring finger protein 24 0.0299974
BRWD3 bromodomain and WD repeat domain containing 3 0.0295708
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0294838
FKBP1A FK506 binding protein 1A, 12kDa 0.0293157
RAB6A RAB6A, member RAS oncogene family 0.0289426
CALU calumenin 0.0289383
PTMA prothymosin, alpha 0.0289141
CSDE1 cold shock domain containing E1, RNA-binding 0.0286868
NOP58 NOP58 ribonucleoprotein 0.0286227
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0283598
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0281765
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0281303
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0280896
SUCO SUN domain containing ossification factor 0.0279942
SPAG9 sperm associated antigen 9 0.0279592
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0279177
ITCH itchy E3 ubiquitin protein ligase 0.0276698
USP37 ubiquitin specific peptidase 37 0.0274649
CALR calreticulin 0.0269704
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.026952
ARRDC3 arrestin domain containing 3 0.0269492
WAC WW domain containing adaptor with coiled-coil 0.0269235
ZNF148 zinc finger protein 148 0.0268143
CCNL1 cyclin L1 0.0268096
MKI67 marker of proliferation Ki-67 0.0267293
LCORL ligand dependent nuclear receptor corepressor-like 0.026619

decreased expression

Symbol Name Standardized Value
CDH13 cadherin 13 -0.139965
TIMP3 TIMP metallopeptidase inhibitor 3 -0.136728
PSD3 pleckstrin and Sec7 domain containing 3 -0.123888
COL1A1 collagen, type I, alpha 1 -0.105434
FRMD4A FERM domain containing 4A -0.10485
HLA-B major histocompatibility complex, class I, B -0.0896161
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0883697
NAV1 neuron navigator 1 -0.0816519
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0811847
SP100 SP100 nuclear antigen -0.0800178
EXT1 exostosin glycosyltransferase 1 -0.0776521
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0746438
GLIS3 GLIS family zinc finger 3 -0.0684741
LOXL2 lysyl oxidase-like 2 -0.0604917
TMEM178B transmembrane protein 178B -0.0597684
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.058712
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0569948
COL1A2 collagen, type I, alpha 2 -0.0565294
INHBA inhibin, beta A -0.0556583
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0519568
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0519456
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.050258
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0494646
COL6A2 collagen, type VI, alpha 2 -0.0493207
PTPRG protein tyrosine phosphatase, receptor type, G -0.0491069
EML5 echinoderm microtubule associated protein like 5 -0.0489648
APCDD1L adenomatosis polyposis coli down-regulated 1-like -0.0484763
TGFBI transforming growth factor, beta-induced, 68kDa -0.0464112
HDAC9 histone deacetylase 9 -0.0461094
COL5A1 collagen, type V, alpha 1 -0.0451159
IGFBP3 insulin-like growth factor binding protein 3 -0.04429
RALY RALY heterogeneous nuclear ribonucleoprotein -0.044145
IFIH1 interferon induced with helicase C domain 1 -0.0440122
CADM1 cell adhesion molecule 1 -0.0437371
IFI6 interferon, alpha-inducible protein 6 -0.0434741
PCBP3 poly(rC) binding protein 3 -0.0431645
TENT5A terminal nucleotidyltransferase 5A -0.0428337
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0424261
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0417555
IER3 immediate early response 3 -0.0413291
EGFR epidermal growth factor receptor -0.0409821
RAI14 retinoic acid induced 14 -0.0409799
HPCAL1 hippocalcin-like 1 -0.0408741
ZBTB38 zinc finger and BTB domain containing 38 -0.0407747
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0402321
TNNC1 troponin C type 1 (slow) -0.0401611
PLSCR1 phospholipid scramblase 1 -0.0394875
RIGI RNA sensor RIG-I -0.0394375
XAF1 XIAP associated factor 1 -0.0386995
FHIT fragile histidine triad -0.0378638
TNS3 tensin 3 -0.0368727
IL1B interleukin 1, beta -0.0367256
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0358013
HLA-A major histocompatibility complex, class I, A -0.0357224
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0357179
MTSS1 metastasis suppressor 1 -0.0356977
HLA-C major histocompatibility complex, class I, C -0.0355152
HMGA2 high mobility group AT-hook 2 -0.0354588
EGR1 early growth response 1 -0.0353413
LPP LIM domain containing preferred translocation partner in lipoma -0.0352644
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0352041
DST dystonin -0.034886
ZEB1 zinc finger E-box binding homeobox 1 -0.0330855
AKAP12 A kinase (PRKA) anchor protein 12 -0.0329068
ADAM12 ADAM metallopeptidase domain 12 -0.0323299
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.032168
INTS6 integrator complex subunit 6 -0.0320255
SAMD9 sterile alpha motif domain containing 9 -0.0319335
ATXN1 ataxin 1 -0.0318931
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0318687
LRMDA leucine rich melanocyte differentiation associated -0.0317359
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0316856
HLA-E major histocompatibility complex, class I, E -0.0314995
JARID2 jumonji, AT rich interactive domain 2 -0.0313437
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0297836
COL5A3 collagen, type V, alpha 3 -0.0294572
TPT1 tumor protein, translationally-controlled 1 -0.0290704
COL4A2 collagen, type IV, alpha 2 -0.0284312
ARL4C ADP-ribosylation factor-like 4C -0.0283107
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0278734
CCDC138 coiled-coil domain containing 138 -0.0275289
RNF213 ring finger protein 213 -0.0271644
COLEC10 collectin sub-family member 10 (C-type lectin) -0.0270619
MMP12 matrix metallopeptidase 12 -0.0269389
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0267096
FBN1 fibrillin 1 -0.0265638
TFPI2 tissue factor pathway inhibitor 2 -0.0265313
ASPH aspartate beta-hydroxylase -0.0264712
CEMIP cell migration inducing protein, hyaluronan binding -0.0259841
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0259677
SYNDIG1 synapse differentiation inducing 1 -0.0259023
IFI16 interferon, gamma-inducible protein 16 -0.0256377
NABP1 nucleic acid binding protein 1 -0.0256332
IGFBP5 insulin-like growth factor binding protein 5 -0.0253143
SLIT2 slit homolog 2 (Drosophila) -0.0253077
VCL vinculin -0.025222
ZNFX1 zinc finger, NFX1-type containing 1 -0.0251199
MAML3 mastermind-like 3 (Drosophila) -0.0250546
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0250314
SH3RF3 SH3 domain containing ring finger 3 -0.0249765