Fedratinib (hydrochloride hydrate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fedratinib (hydrochloride hydrate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fedratinib (hydrochloride hydrate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.208193
NRG3 neuregulin 3 0.179495
PABPC1 poly(A) binding protein, cytoplasmic 1 0.158836
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.145027
NLGN1 neuroligin 1 0.129124
LDHA lactate dehydrogenase A 0.115279
ENO1 enolase 1, (alpha) 0.114154
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.110641
ACTG1 actin gamma 1 0.102308
VIM vimentin 0.0847605
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0816877
PGK1 phosphoglycerate kinase 1 0.0816301
ANGPTL4 angiopoietin-like 4 0.0802734
SFTPA2 surfactant protein A2 0.07731
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0747989
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0723305
SQSTM1 sequestosome 1 0.0670905
POTEF POTE ankyrin domain family, member F 0.0640052
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0617331
ASPH aspartate beta-hydroxylase 0.0614037
PCBP2 poly(rC) binding protein 2 0.0599783
MSI2 musashi RNA-binding protein 2 0.0590826
SLC39A11 solute carrier family 39, member 11 0.0586208
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.057522
RAD51B RAD51 paralog B 0.0568262
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0564623
EEF2 eukaryotic translation elongation factor 2 0.0550271
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0544374
LOC112694756 uncharaterized LOC112694756 0.0539541
SREBF2 sterol regulatory element binding transcription factor 2 0.0539476
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.0538922
CANX calnexin 0.0532728
TPM3 tropomyosin 3 0.0522473
NOTCH2 notch 2 0.0521839
FN1 fibronectin 1 0.050264
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0495391
LINGO2 leucine rich repeat and Ig domain containing 2 0.0490167
ATXN1 ataxin 1 0.047698
ZCCHC7 zinc finger, CCHC domain containing 7 0.0470581
MAML3 mastermind-like 3 (Drosophila) 0.0470425
FMNL2 formin-like 2 0.0459474
OGA O-GlcNAcase 0.0455019
CSDE1 cold shock domain containing E1, RNA-binding 0.0449401
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0444763
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0436005
CADM1 cell adhesion molecule 1 0.0433068
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0426301
APOLD1 apolipoprotein L domain containing 1 0.0421282
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0420464
AKAP9 A kinase (PRKA) anchor protein 9 0.0411614
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0411319
LAMP2 lysosomal-associated membrane protein 2 0.0406777
TNIK TRAF2 and NCK interacting kinase 0.0399607
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0398497
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0397495
WDR45B WD repeat domain 45B 0.0394713
KDM4C lysine (K)-specific demethylase 4C 0.0394324
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0393476
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0391941
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0391326
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0381764
JMJD1C jumonji domain containing 1C 0.0376447
MSN moesin 0.0373646
CALU calumenin 0.037235
GLS2 glutaminase 2 (liver, mitochondrial) 0.0369159
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0365689
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0362804
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0360938
KDM5B lysine (K)-specific demethylase 5B 0.036059
INPP5F inositol polyphosphate-5-phosphatase F 0.0359222
DIAPH1 diaphanous-related formin 1 0.0355666
EHBP1 EH domain binding protein 1 0.0350499
WWTR1 WW domain containing transcription regulator 1 0.0349397
IGF1R insulin-like growth factor 1 receptor 0.0348163
EXT1 exostosin glycosyltransferase 1 0.034758
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0333046
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0332902
USP22 ubiquitin specific peptidase 22 0.0332237
BACE2 beta-site APP-cleaving enzyme 2 0.0327825
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0327057
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.0324589
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0316744
CENPF centromere protein F, 350/400kDa 0.0316421
LSAMP limbic system-associated membrane protein 0.0314743
TTC3 tetratricopeptide repeat domain 3 0.0312974
SMYD3 SET and MYND domain containing 3 0.0306062
ARRDC3 arrestin domain containing 3 0.0301869
ENO2 enolase 2 (gamma, neuronal) 0.0298001
NFE2L1 nuclear factor, erythroid 2-like 1 0.0297071
CTSB cathepsin B 0.0295964
PMEL premelanosome protein 0.0295279
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.02939
KMT2E lysine (K)-specific methyltransferase 2E 0.0292716
GPHN gephyrin 0.0291455
SDC4 syndecan 4 0.0290214
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0289852
FAM13A family with sequence similarity 13, member A 0.0289614
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0288277
YEATS2 YEATS domain containing 2 0.0284137
CDK19 cyclin-dependent kinase 19 0.0284083

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.115537
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.101217
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.092919
FMN1 formin 1 -0.0855011
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0712902
CCND1 cyclin D1 -0.0691963
TXNRD1 thioredoxin reductase 1 -0.0511707
WSB1 WD repeat and SOCS box containing 1 -0.0491918
MAP4 microtubule-associated protein 4 -0.0485841
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0480163
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0456598
ICAM1 intercellular adhesion molecule 1 -0.0436487
PLSCR1 phospholipid scramblase 1 -0.0435582
RUNX1 runt-related transcription factor 1 -0.0434677
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0430338
TMSB10 thymosin beta 10 -0.0406185
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0388413
OXSR1 oxidative stress responsive 1 -0.0385721
SP100 SP100 nuclear antigen -0.0375145
RBM39 RNA binding motif protein 39 -0.0363898
IFI6 interferon, alpha-inducible protein 6 -0.0362584
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0361953
NAMPT nicotinamide phosphoribosyltransferase -0.032817
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0322942
CD44 CD44 molecule (Indian blood group) -0.0321257
TSC22D2 TSC22 domain family, member 2 -0.0316529
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0316196
ELL2 elongation factor, RNA polymerase II, 2 -0.0314473
FRMD5 FERM domain containing 5 -0.0307591
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0305356
RPLP1 ribosomal protein, large, P1 -0.0303503
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit -0.0276495
RASA2 RAS p21 protein activator 2 -0.0265218
FTL ferritin, light polypeptide -0.0258628
ERBIN erbb2 interacting protein -0.0256953
ZFAND3 zinc finger, AN1-type domain 3 -0.0256363
RPL38 ribosomal protein L38 -0.0251484
RPL32 ribosomal protein L32 -0.0245876
ANKRD28 ankyrin repeat domain 28 -0.0245324
TCF20 transcription factor 20 (AR1) -0.0240039
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0237364
HDAC9 histone deacetylase 9 -0.0235743
RPS2 ribosomal protein S2 -0.0232783
MARCHF1 membrane associated ring-CH-type finger 1 -0.0230461
TFG TRK-fused gene -0.0230001
IFI16 interferon, gamma-inducible protein 16 -0.022836
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0223323
RPS24 ribosomal protein S24 -0.022021
HLA-B major histocompatibility complex, class I, B -0.0219878
RIGI RNA sensor RIG-I -0.0219127
RPS23 ribosomal protein S23 -0.0216966
TRIO trio Rho guanine nucleotide exchange factor -0.0214579
USP32 ubiquitin specific peptidase 32 -0.0212354
LAP3 leucine aminopeptidase 3 -0.0211646
RPLP2 ribosomal protein, large, P2 -0.0211528
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough -0.0210341
NPR2 natriuretic peptide receptor 2 -0.0206004
WDR43 WD repeat domain 43 -0.0205461
GNAS GNAS complex locus -0.020497
RNF213 ring finger protein 213 -0.0201184
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0200775
CELF1 CUGBP, Elav-like family member 1 -0.0200259
NKTR natural killer cell triggering receptor -0.0199599
NF1 neurofibromin 1 -0.0199432
GPBP1 GC-rich promoter binding protein 1 -0.0199325
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0199083
IFI44L interferon-induced protein 44-like -0.0198069
SLC38A2 solute carrier family 38, member 2 -0.0196795
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0194433
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0194068
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0193808
AKAP12 A kinase (PRKA) anchor protein 12 -0.0193003
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0192794
NUP153 nucleoporin 153kDa -0.0190914
NRIP1 nuclear receptor interacting protein 1 -0.0189523
N4BP1 NEDD4 binding protein 1 -0.0188191
XAF1 XIAP associated factor 1 -0.018809
IER3 immediate early response 3 -0.0187775
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0187204
RPS5 ribosomal protein S5 -0.0186737
SNX9 sorting nexin 9 -0.0185565
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0185498
SERINC1 serine incorporator 1 -0.0182682
RPS6 ribosomal protein S6 -0.0182325
RTN4 reticulon 4 -0.0181215
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.018045
RPL34 ribosomal protein L34 -0.0180314
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0178727
GNS glucosamine (N-acetyl)-6-sulfatase -0.0177746
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0176748
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0176707
SEC62 SEC62 homolog (S. cerevisiae) -0.0176606
NOP58 NOP58 ribonucleoprotein -0.0176486
RNF145 ring finger protein 145 -0.0175743
FUBP1 far upstream element (FUSE) binding protein 1 -0.0173354
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0173267
WDR1 WD repeat domain 1 -0.0173207
ZEB2 zinc finger E-box binding homeobox 2 -0.0170597
RHOBTB3 Rho-related BTB domain containing 3 -0.0169801
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0166209