Fenofibrate_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fenofibrate perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fenofibrate_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.302661
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.110349
TRIO trio Rho guanine nucleotide exchange factor 0.0982856
FN1 fibronectin 1 0.0921777
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0764083
MYH9 myosin, heavy chain 9, non-muscle 0.069437
CANX calnexin 0.0689047
ATP13A3 ATPase type 13A3 0.0652918
CADM1 cell adhesion molecule 1 0.0640306
NAMPT nicotinamide phosphoribosyltransferase 0.0639478
SPAG9 sperm associated antigen 9 0.0629462
MT2A metallothionein 2A 0.0539461
CALR calreticulin 0.0512915
PTMA prothymosin, alpha 0.0504817
SMAD3 SMAD family member 3 0.0486522
CAMTA1 calmodulin binding transcription activator 1 0.047286
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0466111
ZNF292 zinc finger protein 292 0.0465508
ZFAND3 zinc finger, AN1-type domain 3 0.0446107
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0433463
ARRDC3 arrestin domain containing 3 0.0417546
UBC ubiquitin C 0.0409832
TM4SF1 transmembrane 4 L six family member 1 0.0405914
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0402352
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0395356
ELL2 elongation factor, RNA polymerase II, 2 0.0383431
EEF2 eukaryotic translation elongation factor 2 0.0377837
CSDE1 cold shock domain containing E1, RNA-binding 0.0365373
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0365
RLF rearranged L-myc fusion 0.0358338
KMT2E lysine (K)-specific methyltransferase 2E 0.0358023
FNDC3B fibronectin type III domain containing 3B 0.03566
PTK2 protein tyrosine kinase 2 0.035397
ICAM1 intercellular adhesion molecule 1 0.0349953
SOD2 superoxide dismutase 2, mitochondrial 0.0330509
ANKRD11 ankyrin repeat domain 11 0.0327142
OGA O-GlcNAcase 0.0326341
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0320058
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0318422
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0317493
APP amyloid beta (A4) precursor protein 0.031062
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0309885
USP3 ubiquitin specific peptidase 3 0.030754
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.030455
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0304426
TNIP1 TNFAIP3 interacting protein 1 0.0301647
LDHA lactate dehydrogenase A 0.0299476
GOLGA4 golgin A4 0.0299401
POSTN periostin, osteoblast specific factor 0.0298343
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0296575
DLG1 discs, large homolog 1 (Drosophila) 0.0290185
RBM39 RNA binding motif protein 39 0.0288819
MRTFA myocardin related transcription factor A 0.0281691
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0280226
RASA2 RAS p21 protein activator 2 0.0279619
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0277378
WSB1 WD repeat and SOCS box containing 1 0.0275292
ADAM17 ADAM metallopeptidase domain 17 0.0271826
MARCHF6 membrane associated ring-CH-type finger 6 0.0265969
VEGFA vascular endothelial growth factor A 0.0260736
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0260618
RAD21 RAD21 homolog (S. pombe) 0.0260268
PDIA6 protein disulfide isomerase family A, member 6 0.0254172
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.025406
KDM3A lysine (K)-specific demethylase 3A 0.0253256
RPS8 ribosomal protein S8 0.0247974
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0247226
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 0.0241605
BHLHE40 basic helix-loop-helix family, member e40 0.0240634
SHB Src homology 2 domain containing adaptor protein B 0.0237766
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0237304
NAV2 neuron navigator 2 0.023579
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0235379
HMGB2 high mobility group box 2 0.0234409
DENND5A DENN/MADD domain containing 5A 0.0234184
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.023396
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0232772
EIF1 eukaryotic translation initiation factor 1 0.0231365
QKI QKI, KH domain containing, RNA binding 0.0228412
NAP1L1 nucleosome assembly protein 1-like 1 0.0226981
COL4A1 collagen, type IV, alpha 1 0.0224668
RPS3 ribosomal protein S3 0.0224609
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0223783
CALU calumenin 0.0223343
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0222811
FMNL2 formin-like 2 0.022276
RPL3 ribosomal protein L3 0.0221455
PDE8A phosphodiesterase 8A 0.0221336
IER3 immediate early response 3 0.0220791
YBX1 Y box binding protein 1 0.021683
FXR1 fragile X mental retardation, autosomal homolog 1 0.0216345
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0214679
RNF145 ring finger protein 145 0.0214064
TMSB4X thymosin beta 4, X-linked 0.0213596
RYBP RING1 and YY1 binding protein 0.0212987
SEPTIN7 septin 7 0.0212887
RPL26 ribosomal protein L26 0.0212303
RIPK2 receptor-interacting serine-threonine kinase 2 0.0210845
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0208281
ADAM9 ADAM metallopeptidase domain 9 0.0207086

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.305143
VIM vimentin -0.117995
NDRG1 N-myc downstream regulated 1 -0.114255
TGFBI transforming growth factor, beta-induced, 68kDa -0.0986503
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0920048
COL1A1 collagen, type I, alpha 1 -0.0903637
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0896607
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0801375
F3 coagulation factor III (thromboplastin, tissue factor) -0.0708807
COL1A2 collagen, type I, alpha 2 -0.0701596
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0685181
CALD1 caldesmon 1 -0.0617268
CDH13 cadherin 13 -0.0590784
FBN1 fibrillin 1 -0.0577232
GLIS3 GLIS family zinc finger 3 -0.0567079
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0562673
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0543185
PSD3 pleckstrin and Sec7 domain containing 3 -0.0522651
TMSB10 thymosin beta 10 -0.0517063
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0456238
DPYD dihydropyrimidine dehydrogenase -0.0440021
VCAN versican -0.0433183
CLMP CXADR-like membrane protein -0.0424219
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0412119
NAV1 neuron navigator 1 -0.0382176
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0370194
ASPH aspartate beta-hydroxylase -0.0362184
CNTN5 contactin 5 -0.0344235
TRPS1 trichorhinophalangeal syndrome I -0.0336309
POTEF POTE ankyrin domain family, member F -0.0324261
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0322247
EGR1 early growth response 1 -0.0321161
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0316592
ZBTB20 zinc finger and BTB domain containing 20 -0.0306195
COL6A1 collagen, type VI, alpha 1 -0.0306035
LTBP1 latent transforming growth factor beta binding protein 1 -0.0299986
COL6A3 collagen, type VI, alpha 3 -0.0299287
IFI6 interferon, alpha-inducible protein 6 -0.0294424
ABI3BP ABI family, member 3 (NESH) binding protein -0.0289791
MAP1B microtubule-associated protein 1B -0.0281654
COL5A1 collagen, type V, alpha 1 -0.028093
CYB5R3 cytochrome b5 reductase 3 -0.0279065
HLA-B major histocompatibility complex, class I, B -0.0270742
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0265642
PRSS23 protease, serine, 23 -0.0264418
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0258612
EXT1 exostosin glycosyltransferase 1 -0.0257983
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0249554
NEK10 NIMA-related kinase 10 -0.0249467
ZFPM2 zinc finger protein, FOG family member 2 -0.0249383
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0241946
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0238775
PDLIM5 PDZ and LIM domain 5 -0.0236654
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.023475
COL6A2 collagen, type VI, alpha 2 -0.0234716
VCL vinculin -0.0234134
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.023367
TPM4 tropomyosin 4 -0.0233364
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0232244
FOXP1 forkhead box P1 -0.0229188
ENO2 enolase 2 (gamma, neuronal) -0.022547
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0215114
ACTG1 actin gamma 1 -0.0214682
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0213592
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0210444
SDC2 syndecan 2 -0.0210394
NRP1 neuropilin 1 -0.0208467
NREP neuronal regeneration related protein -0.0207571
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0205808
CUX1 cut-like homeobox 1 -0.0205257
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0200415
NALF1 NALCN channel auxiliary factor 1 -0.0197041
S100A9 S100 calcium binding protein A9 -0.0192308
OXR1 oxidation resistance 1 -0.0189881
ARL4C ADP-ribosylation factor-like 4C -0.0189471
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0189372
SORBS2 sorbin and SH3 domain containing 2 -0.0185791
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0185052
STC1 stanniocalcin 1 -0.0182971
LMO4 LIM domain only 4 -0.0180415
PTPRG protein tyrosine phosphatase, receptor type, G -0.0179884
HDAC9 histone deacetylase 9 -0.0175236
COL8A1 collagen, type VIII, alpha 1 -0.017397
HLA-A major histocompatibility complex, class I, A -0.017094
PRRX1 paired related homeobox 1 -0.0170845
MAML2 mastermind-like 2 (Drosophila) -0.0169665
CMIP c-Maf inducing protein -0.0168242
OSMR oncostatin M receptor -0.0167735
IL6 interleukin 6 -0.0164963
CST3 cystatin C -0.0159594
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0157917
CTSB cathepsin B -0.0157096
EPHB1 EPH receptor B1 -0.0156041
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.015598
STC2 stanniocalcin 2 -0.015502
FRMD4A FERM domain containing 4A -0.0153231
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0151425
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0151106
MRPS6 mitochondrial ribosomal protein S6 -0.0149527
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0147869