Fenofibrate_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fenofibrate perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fenofibrate_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.202624
GRAMD1B GRAM domain containing 1B 0.14429
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0963553
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.091524
FTH1 ferritin, heavy polypeptide 1 0.0897596
PM20D1 peptidase M20 domain containing 1 0.0797353
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0795885
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0759191
RTN4 reticulon 4 0.0724801
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0706256
TPM3 tropomyosin 3 0.0694086
TFPI2 tissue factor pathway inhibitor 2 0.0594911
NAMPT nicotinamide phosphoribosyltransferase 0.0566064
PDIA6 protein disulfide isomerase family A, member 6 0.0556716
USP3 ubiquitin specific peptidase 3 0.0552194
FGB fibrinogen beta chain 0.0550419
CCNL1 cyclin L1 0.0518946
ZNF292 zinc finger protein 292 0.0447581
RPL3 ribosomal protein L3 0.0437079
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0432632
WDR43 WD repeat domain 43 0.0430161
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0425572
HSPA8 heat shock 70kDa protein 8 0.0424172
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0423112
EEF2 eukaryotic translation elongation factor 2 0.0418943
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0406472
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0390875
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0387358
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0387111
YBX1 Y box binding protein 1 0.0378582
FXR1 fragile X mental retardation, autosomal homolog 1 0.0378572
NUP58 nucleoporin 58 0.0368822
CYRIB CYFIP related Rac1 interactor B 0.0365396
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.036442
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0360743
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0360235
RPL4 ribosomal protein L4 0.0355608
ANLN anillin, actin binding protein 0.03539
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0351681
CSDE1 cold shock domain containing E1, RNA-binding 0.0348165
CHN1 chimerin 1 0.034077
EIF4A1 eukaryotic translation initiation factor 4A1 0.0338903
SLC38A2 solute carrier family 38, member 2 0.0332974
OLA1 Obg-like ATPase 1 0.0329879
RAD21 RAD21 homolog (S. pombe) 0.0323313
YBX3 Y box binding protein 3 0.0314878
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.031356
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0311864
MKI67 marker of proliferation Ki-67 0.0311613
POTEF POTE ankyrin domain family, member F 0.0311035
ARL5B ADP-ribosylation factor-like 5B 0.0307563
ADAM17 ADAM metallopeptidase domain 17 0.0306822
KMT2E lysine (K)-specific methyltransferase 2E 0.0302954
TPD52 tumor protein D52 0.0302489
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0299306
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0298662
PFDN2 prefoldin subunit 2 0.0297438
ADAM9 ADAM metallopeptidase domain 9 0.0296969
BCLAF1 BCL2-associated transcription factor 1 0.0296102
CENPF centromere protein F, 350/400kDa 0.0295317
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0293805
KIF23 kinesin family member 23 0.0290066
RBM39 RNA binding motif protein 39 0.0285773
WBP11 WW domain binding protein 11 0.0282959
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0281515
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0280296
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0279861
YME1L1 YME1-like 1 ATPase 0.0278645
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0277909
HDGF hepatoma-derived growth factor 0.0277184
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0276123
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0275512
RNF145 ring finger protein 145 0.0273652
FGG fibrinogen gamma chain 0.0272742
MTMR3 myotubularin related protein 3 0.0266802
FAM168A family with sequence similarity 168, member A 0.0264341
TPX2 TPX2, microtubule-associated 0.026167
CALR calreticulin 0.0256188
TAGLN2 transgelin 2 0.025515
BIRC2 baculoviral IAP repeat containing 2 0.0253302
QKI QKI, KH domain containing, RNA binding 0.0253126
ENAH enabled homolog (Drosophila) 0.0252424
PFN1 profilin 1 0.0251631
SIN3A SIN3 transcription regulator family member A 0.0251003
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0249138
PDIA3 protein disulfide isomerase family A, member 3 0.0248041
TMEM123 transmembrane protein 123 0.0246639
KCMF1 potassium channel modulatory factor 1 0.0246117
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0246061
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.024566
PCBP2 poly(rC) binding protein 2 0.0245434
RHEB Ras homolog enriched in brain 0.0244624
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0244322
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0243587
JAK1 Janus kinase 1 0.0242301
EEF1G eukaryotic translation elongation factor 1 gamma 0.0241175
MATR3 matrin 3 0.0239678
TRA2B transformer 2 beta homolog (Drosophila) 0.0237001
PNN pinin, desmosome associated protein 0.0236933
MORF4L1 mortality factor 4 like 1 0.023481

decreased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific -0.162515
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.149851
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.149305
THSD4 thrombospondin, type I, domain containing 4 -0.132515
MT2A metallothionein 2A -0.122264
SAMD4A sterile alpha motif domain containing 4A -0.115211
ACTG1 actin gamma 1 -0.110466
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.108486
CMIP c-Maf inducing protein -0.108345
VIM vimentin -0.0966924
IER3 immediate early response 3 -0.0800364
DOCK4 dedicator of cytokinesis 4 -0.0796634
TPT1 tumor protein, translationally-controlled 1 -0.0726829
FMNL2 formin-like 2 -0.0708422
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0704374
IGFBP3 insulin-like growth factor binding protein 3 -0.0696655
EGFR epidermal growth factor receptor -0.0693059
TRIO trio Rho guanine nucleotide exchange factor -0.0665565
FLNB filamin B, beta -0.0634164
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0604003
FNDC3B fibronectin type III domain containing 3B -0.0581923
EXT1 exostosin glycosyltransferase 1 -0.0581648
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0580471
CAVIN1 caveolae associated protein 1 -0.0541437
MAML3 mastermind-like 3 (Drosophila) -0.0539271
BASP1 brain abundant, membrane attached signal protein 1 -0.0534526
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0521326
SMOC1 SPARC related modular calcium binding 1 -0.0519813
ARHGAP26 Rho GTPase activating protein 26 -0.0517264
GLIS3 GLIS family zinc finger 3 -0.0515485
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0506247
PYGL phosphorylase, glycogen, liver -0.0490339
MYO1E myosin IE -0.0480074
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0478177
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0456311
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0453319
DOCK5 dedicator of cytokinesis 5 -0.0453026
INTS6 integrator complex subunit 6 -0.0450412
ATXN1 ataxin 1 -0.0441442
PTPRM protein tyrosine phosphatase, receptor type, M -0.0434557
PARD3 par-3 family cell polarity regulator -0.0426478
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0415348
NEBL nebulette -0.0412517
NDRG1 N-myc downstream regulated 1 -0.0406246
RPL35A ribosomal protein L35a -0.0406101
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0391777
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.038725
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0381577
DST dystonin -0.0377115
RPS29 ribosomal protein S29 -0.0375492
RPS8 ribosomal protein S8 -0.0368006
UBASH3B ubiquitin associated and SH3 domain containing B -0.0365492
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0362868
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0362076
ZBTB20 zinc finger and BTB domain containing 20 -0.0361311
NEGR1 neuronal growth regulator 1 -0.0361009
HLA-B major histocompatibility complex, class I, B -0.0360553
IGF2 insulin-like growth factor 2 -0.0358807
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0354154
RAB7A RAB7A, member RAS oncogene family -0.0350762
EHBP1 EH domain binding protein 1 -0.0348245
RAD51B RAD51 paralog B -0.0348078
EPAS1 endothelial PAS domain protein 1 -0.0340336
RPL31 ribosomal protein L31 -0.0337163
CTBP2 C-terminal binding protein 2 -0.0336389
NF1 neurofibromin 1 -0.0331573
CUX1 cut-like homeobox 1 -0.0330977
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0330081
RPL37A ribosomal protein L37a -0.0330061
PTMA prothymosin, alpha -0.0325843
EFNA5 ephrin-A5 -0.0324889
NUMB numb homolog (Drosophila) -0.0319745
S100A10 S100 calcium binding protein A10 -0.0314855
EIF1 eukaryotic translation initiation factor 1 -0.0313513
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0313155
HMGA2 high mobility group AT-hook 2 -0.031188
RPS27A ribosomal protein S27a -0.0308216
SLC35F3 solute carrier family 35, member F3 -0.0306986
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0306633
C15ORF48 chromosome 15 open reading frame 48 -0.030647
PCNX4 pecanex 4 -0.0304218
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0297591
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0296361
NLK nemo-like kinase -0.0295938
SNX14 sorting nexin 14 -0.0290966
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0286506
VCL vinculin -0.0278393
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.027679
ZMYND8 zinc finger, MYND-type containing 8 -0.0275004
AHNAK AHNAK nucleoprotein -0.0274983
TTC28 tetratricopeptide repeat domain 28 -0.0274544
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0272537
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.027171
CDK13 cyclin-dependent kinase 13 -0.0270858
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0270838
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.026737
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0265606
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0263389
LOXL2 lysyl oxidase-like 2 -0.0263225
KYNU kynureninase -0.0263087