Fenofibrate_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fenofibrate perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fenofibrate_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.260354
NDRG1 N-myc downstream regulated 1 0.171535
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.143376
KRT17 keratin 17, type I 0.130447
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.116914
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.103995
EZR ezrin 0.103054
VEGFA vascular endothelial growth factor A 0.100363
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0925395
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0923671
FMN1 formin 1 0.0874424
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.0829471
ELL2 elongation factor, RNA polymerase II, 2 0.0816053
AKAP12 A kinase (PRKA) anchor protein 12 0.0781824
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0773214
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0746101
S100A9 S100 calcium binding protein A9 0.0730551
ZBTB20 zinc finger and BTB domain containing 20 0.0662176
FTH1 ferritin, heavy polypeptide 1 0.0617871
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0606071
LDHA lactate dehydrogenase A 0.0588577
ENO1 enolase 1, (alpha) 0.0578554
FNDC3B fibronectin type III domain containing 3B 0.0578071
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0577209
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0569699
WAC WW domain containing adaptor with coiled-coil 0.0566026
PRKCSH protein kinase C substrate 80K-H 0.0562439
ESYT2 extended synaptotagmin-like protein 2 0.056116
UBC ubiquitin C 0.0549746
BACE2 beta-site APP-cleaving enzyme 2 0.0535374
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0530055
SLTM SAFB-like, transcription modulator 0.0526203
MT2A metallothionein 2A 0.0494335
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0491873
CSNK1A1 casein kinase 1, alpha 1 0.048172
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0476682
ACTN4 actinin, alpha 4 0.0464187
CNKSR3 CNKSR family member 3 0.0457844
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0456712
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0449607
DSCAM Down syndrome cell adhesion molecule 0.0448311
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0444915
MCL1 myeloid cell leukemia 1 0.0436466
PTMA prothymosin, alpha 0.0433666
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0429009
RICTOR RPTOR independent companion of MTOR, complex 2 0.0425973
PTK2 protein tyrosine kinase 2 0.0423573
KDM3A lysine (K)-specific demethylase 3A 0.0421101
FN1 fibronectin 1 0.0411635
H3-3B H3.3 histone B 0.0408541
CD2AP CD2-associated protein 0.0406583
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0404069
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0403801
EXOC6B exocyst complex component 6B 0.0401304
SKAP1 src kinase associated phosphoprotein 1 0.0399959
ANKRD17 ankyrin repeat domain 17 0.0395618
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.039305
FRMD4A FERM domain containing 4A 0.0391385
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0390068
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.038944
RBM39 RNA binding motif protein 39 0.0385018
NKD1 naked cuticle homolog 1 (Drosophila) 0.0384658
SOS1 son of sevenless homolog 1 (Drosophila) 0.0383556
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0382544
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0382049
CTNND1 catenin (cadherin-associated protein), delta 1 0.0377425
ATP11A ATPase, class VI, type 11A 0.0376562
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0372162
KDM4C lysine (K)-specific demethylase 4C 0.0369658
RORA RAR-related orphan receptor A 0.0368181
TM4SF1 transmembrane 4 L six family member 1 0.0354096
RPS3 ribosomal protein S3 0.0353632
PICALM phosphatidylinositol binding clathrin assembly protein 0.0352875
ITGA6 integrin, alpha 6 0.0350571
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0345292
MACF1 microtubule-actin crosslinking factor 1 0.0344884
FTL ferritin, light polypeptide 0.0344502
CUX1 cut-like homeobox 1 0.0340631
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.033549
ZMYND8 zinc finger, MYND-type containing 8 0.0333507
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0332552
BIRC6 baculoviral IAP repeat containing 6 0.0326393
ANKRD28 ankyrin repeat domain 28 0.0326065
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0324928
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0324288
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.032399
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0317422
ARHGAP35 Rho GTPase activating protein 35 0.0317335
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0311481
ARHGAP32 Rho GTPase activating protein 32 0.0308408
FHIT fragile histidine triad 0.0307629
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0307249
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0303198
SAMD4A sterile alpha motif domain containing 4A 0.0300297
LIMCH1 LIM and calponin homology domains 1 0.0299031
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0292855
AFF4 AF4/FMR2 family, member 4 0.0289104
S100A8 S100 calcium binding protein A8 0.028756
TPM3 tropomyosin 3 0.0282791
BZW1 basic leucine zipper and W2 domains 1 0.0282283

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.0999894
NCOA3 nuclear receptor coactivator 3 -0.095221
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0924268
MYO1E myosin IE -0.0806602
KTN1 kinectin 1 (kinesin receptor) -0.0710881
ANXA1 annexin A1 -0.0704711
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.066562
ARHGAP5 Rho GTPase activating protein 5 -0.0664776
KMT2C lysine (K)-specific methyltransferase 2C -0.0648747
RPLP0 ribosomal protein, large, P0 -0.062587
MORF4L2 mortality factor 4 like 2 -0.0619514
SSBP2 single-stranded DNA binding protein 2 -0.0612187
EGFR epidermal growth factor receptor -0.0594071
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0592199
PIBF1 progesterone immunomodulatory binding factor 1 -0.059124
COPA coatomer protein complex, subunit alpha -0.0588033
CDC73 cell division cycle 73 -0.058447
USP9X ubiquitin specific peptidase 9, X-linked -0.057869
BTG1 B-cell translocation gene 1, anti-proliferative -0.0571779
ACBD3 acyl-CoA binding domain containing 3 -0.0556715
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0545295
ANXA2 annexin A2 -0.0544627
KPNB1 karyopherin (importin) beta 1 -0.0529686
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0525216
HMGA1 high mobility group AT-hook 1 -0.0520312
NPTN neuroplastin -0.0514753
OXR1 oxidation resistance 1 -0.0506325
PDIA3 protein disulfide isomerase family A, member 3 -0.0502619
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0501954
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0500746
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0496464
SQSTM1 sequestosome 1 -0.0493016
RCOR1 REST corepressor 1 -0.0489134
PDE10A phosphodiesterase 10A -0.048908
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0488015
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0483397
PHF21A PHD finger protein 21A -0.0482834
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0480297
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0464605
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0463413
RPL23 ribosomal protein L23 -0.0459823
SRPK2 SRSF protein kinase 2 -0.0451587
TXNIP thioredoxin interacting protein -0.0449639
CD44 CD44 molecule (Indian blood group) -0.0448176
MAPK8 mitogen-activated protein kinase 8 -0.0446074
RPL35A ribosomal protein L35a -0.0441544
THOC2 THO complex 2 -0.0437302
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0428569
CMIP c-Maf inducing protein -0.0426018
XPO1 exportin 1 -0.042477
LPP LIM domain containing preferred translocation partner in lipoma -0.0424528
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0422134
GPC6 glypican 6 -0.0417433
IGF2 insulin-like growth factor 2 -0.0415474
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0414382
ATP11B ATPase, class VI, type 11B -0.0412213
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0406629
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0404305
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0399866
CALR calreticulin -0.0397579
TRA2A transformer 2 alpha homolog (Drosophila) -0.0396447
SP100 SP100 nuclear antigen -0.0393264
IGF1R insulin-like growth factor 1 receptor -0.0391357
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0391103
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0389338
MYO6 myosin VI -0.0387708
MED13 mediator complex subunit 13 -0.0387028
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0386523
POTEF POTE ankyrin domain family, member F -0.0385326
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0384474
SETD2 SET domain containing 2 -0.0381491
VCL vinculin -0.0380157
RAB1A RAB1A, member RAS oncogene family -0.0375312
ANO6 anoctamin 6 -0.037483
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0371356
LAMC2 laminin, gamma 2 -0.0369993
RPL11 ribosomal protein L11 -0.0369691
ARF4 ADP-ribosylation factor 4 -0.03679
YAP1 Yes-associated protein 1 -0.035475
TMOD3 tropomodulin 3 (ubiquitous) -0.0352884
KDM5B lysine (K)-specific demethylase 5B -0.0351366
SEPTIN2 septin 2 -0.0348027
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0345656
KDM7A lysine (K)-specific demethylase 7A -0.0340628
KDM6A lysine (K)-specific demethylase 6A -0.0338703
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0338583
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.033801
HLA-B major histocompatibility complex, class I, B -0.0330777
HILPDA hypoxia inducible lipid droplet-associated -0.0329299
FOXP1 forkhead box P1 -0.0327968
MED13L mediator complex subunit 13-like -0.032443
CHD1 chromodomain helicase DNA binding protein 1 -0.0322239
ZFAND6 zinc finger, AN1-type domain 6 -0.0321349
YME1L1 YME1-like 1 ATPase -0.0319206
CALU calumenin -0.0312271
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 -0.0306159
TNPO1 transportin 1 -0.0306092
MATR3 matrin 3 -0.0305354
S100A10 S100 calcium binding protein A10 -0.0303722
RUNX1 runt-related transcription factor 1 -0.0302962