Fenofibrate_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fenofibrate perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fenofibrate_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.192898
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.126477
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.119491
PEG10 paternally expressed 10 0.100372
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.096889
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0914171
PTMA prothymosin, alpha 0.0849198
TMSB4X thymosin beta 4, X-linked 0.0848096
THBS1 thrombospondin 1 0.0831838
FNDC3B fibronectin type III domain containing 3B 0.0822884
ZFAND3 zinc finger, AN1-type domain 3 0.0810068
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0741476
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0720401
CENPF centromere protein F, 350/400kDa 0.0706665
RBM39 RNA binding motif protein 39 0.0680038
ZNF292 zinc finger protein 292 0.0675085
TRIO trio Rho guanine nucleotide exchange factor 0.0646478
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0644084
NCKAP1 NCK-associated protein 1 0.0622154
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0615635
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.060374
HMGB2 high mobility group box 2 0.0601453
MACF1 microtubule-actin crosslinking factor 1 0.0589111
MYH9 myosin, heavy chain 9, non-muscle 0.058012
TSC22D2 TSC22 domain family, member 2 0.0576885
CALR calreticulin 0.0570743
STRN3 striatin, calmodulin binding protein 3 0.0567145
XPO1 exportin 1 0.0547347
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0532864
RTN4 reticulon 4 0.0526864
MARCHF6 membrane associated ring-CH-type finger 6 0.0509879
H1-0 H1.0 linker histone 0.0504928
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0502388
DSCAM Down syndrome cell adhesion molecule 0.0494395
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0489981
PICALM phosphatidylinositol binding clathrin assembly protein 0.048841
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0483332
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0483058
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0477402
SLC38A2 solute carrier family 38, member 2 0.0475695
DST dystonin 0.0473441
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.046529
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0465119
RAD21 RAD21 homolog (S. pombe) 0.0462967
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0447366
PUM1 pumilio RNA-binding family member 1 0.044606
CSDE1 cold shock domain containing E1, RNA-binding 0.0438384
KDM3A lysine (K)-specific demethylase 3A 0.0437904
ADAM9 ADAM metallopeptidase domain 9 0.0434716
RAI1 retinoic acid induced 1 0.0432946
BCLAF1 BCL2-associated transcription factor 1 0.0431425
FAT1 FAT atypical cadherin 1 0.0429036
EMP1 epithelial membrane protein 1 0.0428269
RPL3 ribosomal protein L3 0.0427251
RPL4 ribosomal protein L4 0.039998
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0399802
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0398788
PRELID2 PRELI domain containing 2 0.0392072
COL5A2 collagen, type V, alpha 2 0.038938
ERBB4 erb-b2 receptor tyrosine kinase 4 0.038788
TPX2 TPX2, microtubule-associated 0.0381965
OGA O-GlcNAcase 0.0375885
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0375402
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0374133
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0373788
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 0.0372979
RHEB Ras homolog enriched in brain 0.0371338
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0369869
ANXA1 annexin A1 0.0362821
NFIA nuclear factor I/A 0.0362531
ECT2 epithelial cell transforming 2 0.0361552
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0360537
YBX1 Y box binding protein 1 0.036009
GOLGA4 golgin A4 0.0357137
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0355577
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0351386
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0347061
THOC2 THO complex 2 0.0343939
CANX calnexin 0.0342958
CENPE centromere protein E, 312kDa 0.0341633
CKAP2 cytoskeleton associated protein 2 0.0341164
PDIA6 protein disulfide isomerase family A, member 6 0.0340974
ACTN4 actinin, alpha 4 0.0340642
MKI67 marker of proliferation Ki-67 0.0338383
JMJD1C jumonji domain containing 1C 0.0338003
PLPP1 phospholipid phosphatase 1 0.0334522
ATG5 autophagy related 5 0.0331726
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0330635
APP amyloid beta (A4) precursor protein 0.032664
SEPTIN7 septin 7 0.0321978
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0321378
NUP58 nucleoporin 58 0.0321223
CCNL1 cyclin L1 0.0320909
CKAP5 cytoskeleton associated protein 5 0.0320675
BZW1 basic leucine zipper and W2 domains 1 0.0320504
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0319604
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0317341
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0316486
RPN2 ribophorin II 0.0315719
ZFR zinc finger RNA binding protein 0.0315501

decreased expression

Symbol Name Standardized Value
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.1635
CADM2 cell adhesion molecule 2 -0.129223
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.102278
PCDH9 protocadherin 9 -0.0826719
COL11A1 collagen, type XI, alpha 1 -0.0691349
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0638651
TMSB10 thymosin beta 10 -0.0636002
CDH19 cadherin 19, type 2 -0.0559634
RASAL2 RAS protein activator like 2 -0.0509836
VIM vimentin -0.0507071
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.048996
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0466251
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.043757
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0426642
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0420184
GNAS GNAS complex locus -0.0405083
RPLP1 ribosomal protein, large, P1 -0.0382345
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0364381
FOXP2 forkhead box P2 -0.0363074
SLIT2 slit homolog 2 (Drosophila) -0.0357867
RPL35A ribosomal protein L35a -0.0352626
FST follistatin -0.0346814
RPS16 ribosomal protein S16 -0.0345665
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0325412
ISG15 ISG15 ubiquitin-like modifier -0.0322173
APOE apolipoprotein E -0.0317263
MDK midkine (neurite growth-promoting factor 2) -0.0311776
FBXL17 F-box and leucine-rich repeat protein 17 -0.0305704
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0305097
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0301978
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0296401
PCLO piccolo presynaptic cytomatrix protein -0.0294009
GREB1L growth regulation by estrogen in breast cancer-like -0.0290264
RAD51B RAD51 paralog B -0.0287138
HSPB1 heat shock 27kDa protein 1 -0.0283928
RPL23 ribosomal protein L23 -0.0278421
LOC102724023 ES1 protein homolog, mitochondrial -0.0277762
FTL ferritin, light polypeptide -0.0274324
LRRC4C leucine rich repeat containing 4C -0.0272131
MT2A metallothionein 2A -0.0270606
RPS8 ribosomal protein S8 -0.0266609
RPL37A ribosomal protein L37a -0.026424
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0260751
ZC3H12B zinc finger CCCH-type containing 12B -0.0257105
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0252908
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0252006
RPL30 ribosomal protein L30 -0.0249932
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0247591
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0245119
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0245112
RPS25 ribosomal protein S25 -0.024273
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0242382
NRIP1 nuclear receptor interacting protein 1 -0.0239017
MEIS2 Meis homeobox 2 -0.0236488
SOS1 son of sevenless homolog 1 (Drosophila) -0.0234633
SCFD1 sec1 family domain containing 1 -0.0233791
ADGRL2 adhesion G protein-coupled receptor L2 -0.0228391
RPL26 ribosomal protein L26 -0.0226571
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0224417
FSCN1 fascin actin-bundling protein 1 -0.0222862
SOX5 SRY (sex determining region Y)-box 5 -0.0222446
RPLP0 ribosomal protein, large, P0 -0.0219414
RPL31 ribosomal protein L31 -0.0218365
FN1 fibronectin 1 -0.0214862
ARLN allregulin -0.0213417
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0212865
UBAP2 ubiquitin associated protein 2 -0.0212655
ZFHX4 zinc finger homeobox 4 -0.0208854
CSRNP3 cysteine-serine-rich nuclear protein 3 -0.0207608
RPS19 ribosomal protein S19 -0.0203365
RPS6 ribosomal protein S6 -0.0201699
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0198702
HMGA2 high mobility group AT-hook 2 -0.0196312
GCC2 GRIP and coiled-coil domain containing 2 -0.0192426
FOXO1 forkhead box O1 -0.0191624
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0191613
LUZP2 leucine zipper protein 2 -0.0191342
RPS15 ribosomal protein S15 -0.0189827
CHD9 chromodomain helicase DNA binding protein 9 -0.0189011
CNRIP1 cannabinoid receptor interacting protein 1 -0.0188543
PALLD palladin, cytoskeletal associated protein -0.0187504
ACACA acetyl-CoA carboxylase alpha -0.01854
RPS27A ribosomal protein S27a -0.0183766
ZFYVE16 zinc finger, FYVE domain containing 16 -0.0182478
ANK2 ankyrin 2, neuronal -0.0182318
SNX6 sorting nexin 6 -0.018198
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0181101
RCOR1 REST corepressor 1 -0.0176812
CYB5R3 cytochrome b5 reductase 3 -0.0176716
CNTN6 contactin 6 -0.0175751
DNAH11 dynein, axonemal, heavy chain 11 -0.0174445
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0173133
RPL34 ribosomal protein L34 -0.0172079
RPL11 ribosomal protein L11 -0.0172025
AHI1 Abelson helper integration site 1 -0.0171893
MAML2 mastermind-like 2 (Drosophila) -0.0171787
PCDH7 protocadherin 7 -0.017143
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9 -0.0170979
SIK2 salt-inducible kinase 2 -0.0170887
PBRM1 polybromo 1 -0.0170172