Fenofibrate_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fenofibrate perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fenofibrate_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.12516
ADAM10 ADAM metallopeptidase domain 10 0.110561
PKM pyruvate kinase, muscle 0.0953926
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0780437
FLNB filamin B, beta 0.0774034
ECT2 epithelial cell transforming 2 0.0623208
EZR ezrin 0.0607447
PDGFC platelet derived growth factor C 0.0551022
PDE4D phosphodiesterase 4D, cAMP-specific 0.0508061
ZNF292 zinc finger protein 292 0.0494495
CCNL1 cyclin L1 0.0487579
YAP1 Yes-associated protein 1 0.0463919
UBC ubiquitin C 0.0456254
RTN4 reticulon 4 0.0449775
RPL3 ribosomal protein L3 0.0440408
TMSB4X thymosin beta 4, X-linked 0.0436782
EIF4A2 eukaryotic translation initiation factor 4A2 0.0428509
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0426284
SQSTM1 sequestosome 1 0.0403644
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0393952
KMT2C lysine (K)-specific methyltransferase 2C 0.0390838
RHOA ras homolog family member A 0.0390039
CAMTA1 calmodulin binding transcription activator 1 0.0385064
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0383
DSCAM Down syndrome cell adhesion molecule 0.03814
QKI QKI, KH domain containing, RNA binding 0.037228
PRELID2 PRELI domain containing 2 0.0362321
RSRC2 arginine/serine-rich coiled-coil 2 0.0361658
OGA O-GlcNAcase 0.0361281
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0358609
TXNIP thioredoxin interacting protein 0.034523
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0344812
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0343409
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0340402
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.034007
ZNF608 zinc finger protein 608 0.0338949
SLC38A2 solute carrier family 38, member 2 0.0335898
CUL3 cullin 3 0.0335514
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0335113
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0334032
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0327276
ANKRD36 ankyrin repeat domain 36 0.0324681
EEF2 eukaryotic translation elongation factor 2 0.03242
PLPP3 phospholipid phosphatase 3 0.0322094
AHNAK AHNAK nucleoprotein 0.0316674
KDM3A lysine (K)-specific demethylase 3A 0.0315765
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0313067
ADAM9 ADAM metallopeptidase domain 9 0.0311395
KDM6A lysine (K)-specific demethylase 6A 0.0307728
GLS2 glutaminase 2 (liver, mitochondrial) 0.0302508
PICALM phosphatidylinositol binding clathrin assembly protein 0.0299129
OLA1 Obg-like ATPase 1 0.0298745
RAD21 RAD21 homolog (S. pombe) 0.0297478
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0294587
ANKRD12 ankyrin repeat domain 12 0.0292934
RB1CC1 RB1-inducible coiled-coil 1 0.0285861
APP amyloid beta (A4) precursor protein 0.0283062
RBM39 RNA binding motif protein 39 0.0282822
NAMPT nicotinamide phosphoribosyltransferase 0.0281891
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0281709
BRWD1 bromodomain and WD repeat domain containing 1 0.0279559
POTEF POTE ankyrin domain family, member F 0.0276504
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0269806
TBC1D5 TBC1 domain family, member 5 0.0268486
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0268315
TBC1D22A TBC1 domain family, member 22A 0.0266123
PTK2 protein tyrosine kinase 2 0.0264572
EML4 echinoderm microtubule associated protein like 4 0.0256081
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.025578
APLP2 amyloid beta (A4) precursor-like protein 2 0.0255061
EEF1G eukaryotic translation elongation factor 1 gamma 0.0254508
TFG TRK-fused gene 0.0247412
ELOVL5 ELOVL fatty acid elongase 5 0.0245558
YEATS2 YEATS domain containing 2 0.0243269
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0243018
YTHDC1 YTH domain containing 1 0.0242838
VMP1 vacuole membrane protein 1 0.0242558
TLK2 tousled-like kinase 2 0.0241575
TPR translocated promoter region, nuclear basket protein 0.0240696
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0240436
RBM25 RNA binding motif protein 25 0.023927
SRPK2 SRSF protein kinase 2 0.0238364
CSDE1 cold shock domain containing E1, RNA-binding 0.023614
CHD1 chromodomain helicase DNA binding protein 1 0.0235435
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.023538
ADAR adenosine deaminase, RNA-specific 0.0235052
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0234658
MARCHF7 membrane associated ring-CH-type finger 7 0.0234557
NBAS neuroblastoma amplified sequence 0.0234064
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0232256
HSPA8 heat shock 70kDa protein 8 0.0232017
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0231843
USP24 ubiquitin specific peptidase 24 0.022972
USP34 ubiquitin specific peptidase 34 0.0229472
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0229259
SFTPA2 surfactant protein A2 0.0226798
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0226343
TGFBR3 transforming growth factor, beta receptor III 0.022631
MACROD2 MACRO domain containing 2 0.0225125
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0223949

decreased expression

Symbol Name Standardized Value
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.153557
CPED1 cadherin-like and PC-esterase domain containing 1 -0.145499
PDE4B phosphodiesterase 4B, cAMP-specific -0.141031
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.134922
FOXP1 forkhead box P1 -0.105584
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0929598
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0663918
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0655158
PTMA prothymosin, alpha -0.0556115
BPTF bromodomain PHD finger transcription factor -0.0460433
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0437566
IARS1 isoleucyl-tRNA synthetase 1 -0.042561
BMP10 bone morphogenetic protein 10 -0.0418019
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0399101
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0397796
VCL vinculin -0.0395471
PDE7B phosphodiesterase 7B -0.0382787
NPAS2 neuronal PAS domain protein 2 -0.0378396
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0369734
ZMYND8 zinc finger, MYND-type containing 8 -0.0350256
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0349232
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0345553
ZNF438 zinc finger protein 438 -0.0338011
SOX6 SRY (sex determining region Y)-box 6 -0.0335533
NFE2L2 nuclear factor, erythroid 2-like 2 -0.032709
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0311169
CUX1 cut-like homeobox 1 -0.030936
GLI3 GLI family zinc finger 3 -0.0305269
ANKRD17 ankyrin repeat domain 17 -0.0294639
TTC3 tetratricopeptide repeat domain 3 -0.0292772
RPLP0 ribosomal protein, large, P0 -0.0283093
EGFR epidermal growth factor receptor -0.0262867
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0255054
CRPPA CDP-L-ribitol pyrophosphorylase A -0.0253185
HIBCH 3-hydroxyisobutyryl-CoA hydrolase -0.0251323
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0250496
DPYD dihydropyrimidine dehydrogenase -0.0249502
VDAC1 voltage-dependent anion channel 1 -0.0247154
MTAP methylthioadenosine phosphorylase -0.0246211
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0240534
MLIP muscular LMNA-interacting protein -0.0239724
PRSS23 protease, serine, 23 -0.0232453
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0231988
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0228199
PDIA3 protein disulfide isomerase family A, member 3 -0.0225527
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0225361
LARP1 La ribonucleoprotein domain family, member 1 -0.022199
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0214865
NEBL nebulette -0.0214497
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0203753
NT5C2 5'-nucleotidase, cytosolic II -0.0202865
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.020094
HSPB1 heat shock 27kDa protein 1 -0.0200525
RPL7A ribosomal protein L7a -0.0200045
MTDH metadherin -0.0199848
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0199047
DLG1 discs, large homolog 1 (Drosophila) -0.0198488
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0197838
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0196477
S100A6 S100 calcium binding protein A6 -0.0196156
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0188559
PLCE1 phospholipase C, epsilon 1 -0.0188076
COMMD10 COMM domain containing 10 -0.0182196
AEBP2 AE binding protein 2 -0.0182174
UNC13A unc-13 homolog A (C. elegans) -0.0180107
FAF1 Fas (TNFRSF6) associated factor 1 -0.0178981
ACACA acetyl-CoA carboxylase alpha -0.0178556
S100A4 S100 calcium binding protein A4 -0.0178304
RIGI RNA sensor RIG-I -0.0177384
RPL7 ribosomal protein L7 -0.0175366
RPL12 ribosomal protein L12 -0.0174535
PATJ PATJ crumbs cell polarity complex component -0.0174427
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0173989
BCL2 B-cell CLL/lymphoma 2 -0.0172305
CTIF CBP80/20-dependent translation initiation factor -0.01702
PFN1 profilin 1 -0.017019
KIF5B kinesin family member 5B -0.0169994
PHACTR2 phosphatase and actin regulator 2 -0.0168828
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.016876
PKP4 plakophilin 4 -0.0168433
ONECUT2 one cut homeobox 2 -0.016828
NAP1L1 nucleosome assembly protein 1-like 1 -0.0167055
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0166944
JMJD1C jumonji domain containing 1C -0.0166385
LIMD1 LIM domains containing 1 -0.0165797
NBEA neurobeachin -0.0165741
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0164786
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0164415
PWWP2A PWWP domain containing 2A -0.0163942
RYR2 ryanodine receptor 2 (cardiac) -0.0163114
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0162612
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0162367
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0160508
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0160114
AHI1 Abelson helper integration site 1 -0.015976
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 -0.015661
BICD1 bicaudal D homolog 1 (Drosophila) -0.0155798
LPP LIM domain containing preferred translocation partner in lipoma -0.0155343
RBM8A RNA binding motif protein 8A -0.015476
ELOVL6 ELOVL fatty acid elongase 6 -0.0154754