Ferulic acid_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ferulic acid perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ferulic acid_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.193012
CSF1 colony stimulating factor 1 (macrophage) 0.124774
SMAD3 SMAD family member 3 0.0922041
PABPC1 poly(A) binding protein, cytoplasmic 1 0.090883
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0897107
TRIO trio Rho guanine nucleotide exchange factor 0.0846328
CCL2 chemokine (C-C motif) ligand 2 0.0846032
CXCL8 chemokine (C-X-C motif) ligand 8 0.0836956
NRP2 neuropilin 2 0.0815277
EEF2 eukaryotic translation elongation factor 2 0.0801938
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0795074
G0S2 G0/G1 switch 2 0.0743467
ICAM1 intercellular adhesion molecule 1 0.0741348
FAT1 FAT atypical cadherin 1 0.0734798
FNDC3B fibronectin type III domain containing 3B 0.0732346
MSN moesin 0.0711473
FLNA filamin A, alpha 0.0663266
TNIP1 TNFAIP3 interacting protein 1 0.0649952
APP amyloid beta (A4) precursor protein 0.0620974
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0615595
ANKRD33B ankyrin repeat domain 33B 0.0594278
NAMPT nicotinamide phosphoribosyltransferase 0.0569743
BHLHE40 basic helix-loop-helix family, member e40 0.0563462
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0560848
DDIT4 DNA-damage-inducible transcript 4 0.0542052
PTBP3 polypyrimidine tract binding protein 3 0.0528583
EXT1 exostosin glycosyltransferase 1 0.0522772
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0522709
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0520341
VEGFA vascular endothelial growth factor A 0.0512171
GLS2 glutaminase 2 (liver, mitochondrial) 0.0507296
DENND2B DENN domain containing 2B 0.0497503
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0483781
PLEC plectin 0.0475665
NRIP1 nuclear receptor interacting protein 1 0.0467397
SHB Src homology 2 domain containing adaptor protein B 0.0466022
ARRDC3 arrestin domain containing 3 0.0462256
VCAM1 vascular cell adhesion molecule 1 0.0457983
RUNX1 runt-related transcription factor 1 0.0451085
SOD2 superoxide dismutase 2, mitochondrial 0.0443029
ADAM17 ADAM metallopeptidase domain 17 0.0436585
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) 0.0436436
ANKRD11 ankyrin repeat domain 11 0.04364
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0432673
ANKRD10 ankyrin repeat domain 10 0.042311
CD44 CD44 molecule (Indian blood group) 0.042048
ZFP36L1 ZFP36 ring finger protein-like 1 0.0414805
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0413125
GPC6 glypican 6 0.0410655
RPL3 ribosomal protein L3 0.0408699
SEPTIN9 septin 9 0.0398498
ARHGAP26 Rho GTPase activating protein 26 0.0394205
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0393585
POTEF POTE ankyrin domain family, member F 0.0392107
PAX8 paired box 8 0.0378641
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0376094
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0373683
CXCL2 chemokine (C-X-C motif) ligand 2 0.0369692
TPM3 tropomyosin 3 0.0368683
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.036568
IRS2 insulin receptor substrate 2 0.0360645
TGFB2 transforming growth factor, beta 2 0.0359809
GNA12 guanine nucleotide binding protein (G protein) alpha 12 0.0346422
RAD23B RAD23 homolog B (S. cerevisiae) 0.0346363
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0337087
NAV2 neuron navigator 2 0.0337027
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0333983
PLK2 polo-like kinase 2 0.03323
LENG8 leukocyte receptor cluster (LRC) member 8 0.0330777
SP3 Sp3 transcription factor 0.033
ANLN anillin, actin binding protein 0.0328604
HPCAL1 hippocalcin-like 1 0.0327836
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0327031
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0323072
ACTN4 actinin, alpha 4 0.0322036
CADM1 cell adhesion molecule 1 0.0321498
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.032119
EML4 echinoderm microtubule associated protein like 4 0.0319413
RIPK2 receptor-interacting serine-threonine kinase 2 0.0314678
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0310565
P3H2 prolyl 3-hydroxylase 2 0.0310433
UGCG UDP-glucose ceramide glucosyltransferase 0.0304707
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0301842
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0301624
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0298497
TGFBI transforming growth factor, beta-induced, 68kDa 0.0298497
WAC WW domain containing adaptor with coiled-coil 0.0297664
FLNB filamin B, beta 0.0296195
TXNRD1 thioredoxin reductase 1 0.0294844
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0294462
UBE2H ubiquitin-conjugating enzyme E2H 0.0293742
ATP13A3 ATPase type 13A3 0.0293517
CENPF centromere protein F, 350/400kDa 0.0286263
ZFAND3 zinc finger, AN1-type domain 3 0.0285006
PTK2 protein tyrosine kinase 2 0.0284979
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0283552
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.0283317
MYO10 myosin X 0.0282906
JAK1 Janus kinase 1 0.0279021
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0278946

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.227552
FRMD4A FERM domain containing 4A -0.167079
VIM vimentin -0.150049
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.108907
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0984343
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0915037
CP ceruloplasmin (ferroxidase) -0.0766228
TPT1 tumor protein, translationally-controlled 1 -0.061833
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0582752
CTSD cathepsin D -0.0463353
TFPI2 tissue factor pathway inhibitor 2 -0.0439552
HLA-B major histocompatibility complex, class I, B -0.0433216
TMSB10 thymosin beta 10 -0.0426974
PLIN2 perilipin 2 -0.0416663
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0404975
FTL ferritin, light polypeptide -0.0382168
SP100 SP100 nuclear antigen -0.0381931
ARL4C ADP-ribosylation factor-like 4C -0.0376091
RIGI RNA sensor RIG-I -0.0371021
HLA-E major histocompatibility complex, class I, E -0.0360391
IFIH1 interferon induced with helicase C domain 1 -0.0355592
CA12 carbonic anhydrase XII -0.0345596
IFI16 interferon, gamma-inducible protein 16 -0.0340761
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.032034
RRBP1 ribosome binding protein 1 -0.0315045
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0312939
MTDH metadherin -0.0312819
GCC2 GRIP and coiled-coil domain containing 2 -0.0308481
RAI14 retinoic acid induced 14 -0.0302637
MMP7 matrix metallopeptidase 7 -0.029588
EHBP1 EH domain binding protein 1 -0.0286585
SPDYA speedy/RINGO cell cycle regulator family member A -0.0284458
BLZF1 basic leucine zipper nuclear factor 1 -0.0284241
S100A6 S100 calcium binding protein A6 -0.0283851
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.028115
APOL1 apolipoprotein L, 1 -0.0279479
RPL35A ribosomal protein L35a -0.0274644
PRKCA protein kinase C, alpha -0.026782
CAVIN1 caveolae associated protein 1 -0.0266813
MRPS6 mitochondrial ribosomal protein S6 -0.026408
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0262945
VCL vinculin -0.0262716
IFI44L interferon-induced protein 44-like -0.0259147
HLA-C major histocompatibility complex, class I, C -0.0256965
GOLGB1 golgin B1 -0.025151
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0250029
HLA-A major histocompatibility complex, class I, A -0.0249898
KPNB1 karyopherin (importin) beta 1 -0.0245255
ZBTB20 zinc finger and BTB domain containing 20 -0.0243815
IFITM3 interferon induced transmembrane protein 3 -0.0243536
UBC ubiquitin C -0.0241263
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0234966
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0234022
INTS6 integrator complex subunit 6 -0.0233266
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.023192
TTC3 tetratricopeptide repeat domain 3 -0.0230719
TPM4 tropomyosin 4 -0.0226462
RPS6 ribosomal protein S6 -0.0225053
CUX1 cut-like homeobox 1 -0.0224635
XAF1 XIAP associated factor 1 -0.021918
RPL34 ribosomal protein L34 -0.0214533
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0214236
RND3 Rho family GTPase 3 -0.0213173
RSL1D1 ribosomal L1 domain containing 1 -0.0210395
AHNAK AHNAK nucleoprotein -0.0209244
CCND1 cyclin D1 -0.0207042
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0206018
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0205711
CLMP CXADR-like membrane protein -0.0204464
LARP1B La ribonucleoprotein domain family, member 1B -0.0203033
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0203007
RPS24 ribosomal protein S24 -0.020085
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.019782
IFI6 interferon, alpha-inducible protein 6 -0.0195184
GPC5 glypican 5 -0.0191819
EIF1 eukaryotic translation initiation factor 1 -0.0190507
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0189149
ANXA4 annexin A4 -0.0188719
BNC2 basonuclin 2 -0.0188385
OXR1 oxidation resistance 1 -0.0187549
PDIA4 protein disulfide isomerase family A, member 4 -0.0185854
CANX calnexin -0.0184428
IFITM1 interferon induced transmembrane protein 1 -0.0183683
S100A11 S100 calcium binding protein A11 -0.0183625
IFI27 interferon, alpha-inducible protein 27 -0.018324
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0182263
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.0181104
OSMR oncostatin M receptor -0.0180899
GNAS GNAS complex locus -0.0180397
FRMD5 FERM domain containing 5 -0.0179415
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0178982
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0177236
EIF5B eukaryotic translation initiation factor 5B -0.0176918
HM13 histocompatibility (minor) 13 -0.017547
LMAN1 lectin, mannose-binding, 1 -0.0173194
SAMD9 sterile alpha motif domain containing 9 -0.0173149
CKAP4 cytoskeleton-associated protein 4 -0.0172811
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0171903
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0170564
AKAP9 A kinase (PRKA) anchor protein 9 -0.0165083