Flumatinib (mesylate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Flumatinib (mesylate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Flumatinib (mesylate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.150411
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.114853
RPL3 ribosomal protein L3 0.110951
SET SET nuclear proto-oncogene 0.110802
MYH9 myosin, heavy chain 9, non-muscle 0.103646
SRRM2 serine/arginine repetitive matrix 2 0.088998
RPL4 ribosomal protein L4 0.0885342
PGK1 phosphoglycerate kinase 1 0.0708355
FLNB filamin B, beta 0.0701925
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0697387
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0686928
NAP1L1 nucleosome assembly protein 1-like 1 0.0682475
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0678445
RPS12 ribosomal protein S12 0.0618894
EEF2 eukaryotic translation elongation factor 2 0.0616579
MACF1 microtubule-actin crosslinking factor 1 0.060099
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0556761
UBA6 ubiquitin-like modifier activating enzyme 6 0.0555175
LOC112694756 uncharaterized LOC112694756 0.0551653
LAMB3 laminin, beta 3 0.0550017
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0532668
STC1 stanniocalcin 1 0.0526804
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0523865
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0523372
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.051087
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0502394
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0501801
LPP LIM domain containing preferred translocation partner in lipoma 0.0499252
ELL2 elongation factor, RNA polymerase II, 2 0.0421375
NUP58 nucleoporin 58 0.0416918
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0414511
FLNA filamin A, alpha 0.0414472
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0408821
TPM3 tropomyosin 3 0.0407175
XPO1 exportin 1 0.0393796
ENO1 enolase 1, (alpha) 0.0387532
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0385759
NCKAP1 NCK-associated protein 1 0.0385508
RPSA ribosomal protein SA 0.0385269
RPS2 ribosomal protein S2 0.0383925
CEP250 centrosomal protein 250kDa 0.038302
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0381277
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.037494
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0372653
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0362529
ASPH aspartate beta-hydroxylase 0.0361904
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0361515
USP9X ubiquitin specific peptidase 9, X-linked 0.0360595
EIF4B eukaryotic translation initiation factor 4B 0.0359099
HSPA8 heat shock 70kDa protein 8 0.0356567
ATP13A3 ATPase type 13A3 0.0356046
FAM91A1 family with sequence similarity 91, member A1 0.0353083
MTAP methylthioadenosine phosphorylase 0.0349152
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 0.0345925
PRRC2C proline-rich coiled-coil 2C 0.0343995
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0337347
CAPRIN2 caprin family member 2 0.0333911
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0331446
YEATS2 YEATS domain containing 2 0.0328687
PICALM phosphatidylinositol binding clathrin assembly protein 0.032808
RPL37A ribosomal protein L37a 0.0323626
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0321621
KDM5C lysine (K)-specific demethylase 5C 0.0318727
H1-4 H1.4 linker histone, cluster member 0.0312081
SBF2 SET binding factor 2 0.0310693
PTMA prothymosin, alpha 0.0310628
NUDC nudC nuclear distribution protein 0.0310008
HMGB2 high mobility group box 2 0.0306171
APP amyloid beta (A4) precursor protein 0.0306044
PDIA3 protein disulfide isomerase family A, member 3 0.0305257
TTR transthyretin 0.0303034
PTBP2 polypyrimidine tract binding protein 2 0.030257
ANXA5 annexin A5 0.0301968
ARGLU1 arginine and glutamate rich 1 0.0300881
ADAM17 ADAM metallopeptidase domain 17 0.0299997
SMYD3 SET and MYND domain containing 3 0.029637
KDM6A lysine (K)-specific demethylase 6A 0.0293502
EIF4A1 eukaryotic translation initiation factor 4A1 0.029251
RASA2 RAS p21 protein activator 2 0.0290454
HDGF hepatoma-derived growth factor 0.0290203
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0285942
PBX3 pre-B-cell leukemia homeobox 3 0.0285901
PRELID2 PRELI domain containing 2 0.0285016
FHIT fragile histidine triad 0.0282592
RPS18 ribosomal protein S18 0.0282001
MAP2K1 mitogen-activated protein kinase kinase 1 0.0280933
ACTN1 actinin, alpha 1 0.0278679
TRIO trio Rho guanine nucleotide exchange factor 0.0276851
TOMM34 translocase of outer mitochondrial membrane 34 0.0275242
PRPF8 pre-mRNA processing factor 8 0.0274137
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0273022
RPL7 ribosomal protein L7 0.0272848
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0270981
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.026666
RBM33 RNA binding motif protein 33 0.0266334
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0257423
PDIA6 protein disulfide isomerase family A, member 6 0.0256857
RBM26 RNA binding motif protein 26 0.0255508
MCL1 myeloid cell leukemia 1 0.0255042
TOP2B topoisomerase (DNA) II beta 180kDa 0.0253946

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.210187
ACTG1 actin gamma 1 -0.125394
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.120302
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.117159
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.107348
MCTP1 multiple C2 domains, transmembrane 1 -0.0974541
IARS1 isoleucyl-tRNA synthetase 1 -0.0968661
EGR1 early growth response 1 -0.0888498
RPS6 ribosomal protein S6 -0.0861916
RPL8 ribosomal protein L8 -0.0858959
HDAC9 histone deacetylase 9 -0.0850262
HMGA1 high mobility group AT-hook 1 -0.0845422
FRMD6 FERM domain containing 6 -0.0805038
RAB7A RAB7A, member RAS oncogene family -0.0804881
RPLP1 ribosomal protein, large, P1 -0.0752165
NABP1 nucleic acid binding protein 1 -0.0723326
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0708722
FTL ferritin, light polypeptide -0.0681759
RPS21 ribosomal protein S21 -0.0655578
TXNRD1 thioredoxin reductase 1 -0.0590557
POTEF POTE ankyrin domain family, member F -0.0587722
MT2A metallothionein 2A -0.0583402
INTS6 integrator complex subunit 6 -0.0570535
EXT1 exostosin glycosyltransferase 1 -0.0567771
SPRED2 sprouty-related, EVH1 domain containing 2 -0.056713
JMJD1C jumonji domain containing 1C -0.056522
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.055884
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0534357
ERBIN erbb2 interacting protein -0.0488379
AGO2 argonaute RISC catalytic component 2 -0.0487798
FBXO11 F-box protein 11 -0.04683
RPLP0 ribosomal protein, large, P0 -0.0460428
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0460132
RPL12 ribosomal protein L12 -0.045636
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.045156
RPL32 ribosomal protein L32 -0.0439781
RPS19 ribosomal protein S19 -0.0433031
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0416405
RPL34 ribosomal protein L34 -0.0416144
STAU1 staufen double-stranded RNA binding protein 1 -0.0407566
PARD3 par-3 family cell polarity regulator -0.0406747
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0402459
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0401259
S100A9 S100 calcium binding protein A9 -0.0401192
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0394091
B2M beta-2-microglobulin -0.0388759
ZNF438 zinc finger protein 438 -0.0387944
ZFAND3 zinc finger, AN1-type domain 3 -0.0383637
RTN4 reticulon 4 -0.0356639
TMSB10 thymosin beta 10 -0.0353582
RPS15 ribosomal protein S15 -0.0350858
RAB1A RAB1A, member RAS oncogene family -0.0349511
RPL36 ribosomal protein L36 -0.0345622
FUBP3 far upstream element (FUSE) binding protein 3 -0.0344583
RPL35A ribosomal protein L35a -0.0343549
SGMS2 sphingomyelin synthase 2 -0.0339787
RPL28 ribosomal protein L28 -0.0335818
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme -0.0335559
APLP2 amyloid beta (A4) precursor-like protein 2 -0.032636
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.032582
FUS FUS RNA binding protein -0.0317448
RPS16 ribosomal protein S16 -0.0309852
BLZF1 basic leucine zipper nuclear factor 1 -0.030499
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0300285
RPLP2 ribosomal protein, large, P2 -0.0299819
PFN1 profilin 1 -0.0299626
MTDH metadherin -0.0297704
PRRC2B proline-rich coiled-coil 2B -0.0295296
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0293474
JUN jun proto-oncogene -0.0293325
IFI16 interferon, gamma-inducible protein 16 -0.0290989
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0290494
LCORL ligand dependent nuclear receptor corepressor-like -0.029004
BRD2 bromodomain containing 2 -0.0289146
RCOR1 REST corepressor 1 -0.028427
DLC1 DLC1 Rho GTPase activating protein -0.0283558
TPT1 tumor protein, translationally-controlled 1 -0.0282546
NAV3 neuron navigator 3 -0.0279321
RPL35 ribosomal protein L35 -0.0279131
RUNX1 runt-related transcription factor 1 -0.0274708
TMEM263 transmembrane protein 263 -0.0273686
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 -0.0271509
DIAPH3 diaphanous-related formin 3 -0.0270807
USP3 ubiquitin specific peptidase 3 -0.0267559
RSL1D1 ribosomal L1 domain containing 1 -0.026645
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0266101
TSC22D2 TSC22 domain family, member 2 -0.0264202
SP100 SP100 nuclear antigen -0.0261665
CCDC88A coiled-coil domain containing 88A -0.0259916
BRD4 bromodomain containing 4 -0.0256977
AHI1 Abelson helper integration site 1 -0.0255778
KMT2E lysine (K)-specific methyltransferase 2E -0.0255019
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0251004
HLA-A major histocompatibility complex, class I, A -0.0248205
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0245274
CCNI cyclin I -0.0244815
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0243921
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0243465
RPS24 ribosomal protein S24 -0.0243178
RPS23 ribosomal protein S23 -0.0240648