Folic acid_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.165572
MEST mesoderm specific transcript 0.148627
PDE10A phosphodiesterase 10A 0.0957262
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0904233
THSD4 thrombospondin, type I, domain containing 4 0.0820225
SEPTIN11 septin 11 0.0741363
RERE arginine-glutamic acid dipeptide (RE) repeats 0.058106
FBXL7 F-box and leucine-rich repeat protein 7 0.0574419
CANX calnexin 0.0549538
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.054541
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0507791
PRELID2 PRELI domain containing 2 0.0479651
DOCK1 dedicator of cytokinesis 1 0.0476683
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0457165
DLG1 discs, large homolog 1 (Drosophila) 0.0425702
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0392466
TSHZ2 teashirt zinc finger homeobox 2 0.038738
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0378033
PDE8A phosphodiesterase 8A 0.037678
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0357608
PKM pyruvate kinase, muscle 0.035515
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0350372
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0343897
HIPK2 homeodomain interacting protein kinase 2 0.0342399
ZBTB20 zinc finger and BTB domain containing 20 0.0341582
ADGRA3 adhesion G protein-coupled receptor A3 0.033431
MARCHF6 membrane associated ring-CH-type finger 6 0.0332561
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0332178
ATP11A ATPase, class VI, type 11A 0.0330126
TXNRD1 thioredoxin reductase 1 0.0330107
NF1 neurofibromin 1 0.0329727
ENO1 enolase 1, (alpha) 0.0323185
NDRG1 N-myc downstream regulated 1 0.0320184
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0315625
FAM13A family with sequence similarity 13, member A 0.0311853
SAMD4A sterile alpha motif domain containing 4A 0.0311641
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.0309121
ITCH itchy E3 ubiquitin protein ligase 0.0308444
TMSB10 thymosin beta 10 0.0307731
MCL1 myeloid cell leukemia 1 0.0298164
BCAS3 breast carcinoma amplified sequence 3 0.0296873
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0294884
AHNAK AHNAK nucleoprotein 0.0293454
SMYD3 SET and MYND domain containing 3 0.0290308
ZNF148 zinc finger protein 148 0.0286786
AFF4 AF4/FMR2 family, member 4 0.0285424
ADAM17 ADAM metallopeptidase domain 17 0.0283236
SOBP sine oculis binding protein homolog (Drosophila) 0.02827
UBC ubiquitin C 0.0277708
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0276035
SEPTIN7 septin 7 0.0275322
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0274993
FN1 fibronectin 1 0.0272453
APLP2 amyloid beta (A4) precursor-like protein 2 0.0262006
BPTF bromodomain PHD finger transcription factor 0.0260128
FNDC3B fibronectin type III domain containing 3B 0.025979
LOC112694756 uncharaterized LOC112694756 0.0259202
OGA O-GlcNAcase 0.0259009
RPL35A ribosomal protein L35a 0.0257676
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0256079
BLTP1 bridge-like lipid transfer protein family member 1 0.0255743
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0255038
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0254842
FLNB filamin B, beta 0.0253996
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 0.025107
ZFHX3 zinc finger homeobox 3 0.0250338
YAP1 Yes-associated protein 1 0.0249793
FGFR2 fibroblast growth factor receptor 2 0.0247896
SH3RF1 SH3 domain containing ring finger 1 0.0247744
ANXA2 annexin A2 0.0247155
LINGO2 leucine rich repeat and Ig domain containing 2 0.0244292
TTC17 tetratricopeptide repeat domain 17 0.024413
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0243614
MYO9A myosin IXA 0.0243575
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.024279
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0242063
PTCH1 patched 1 0.0241296
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0241185
TBL1X transducin (beta)-like 1X-linked 0.0240723
ARL15 ADP-ribosylation factor-like 15 0.0240388
TTC3 tetratricopeptide repeat domain 3 0.0239726
DCAF6 DDB1 and CUL4 associated factor 6 0.0238089
ANO6 anoctamin 6 0.0237992
DOT1L DOT1-like histone H3K79 methyltransferase 0.0236112
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0235078
BBX bobby sox homolog (Drosophila) 0.0232921
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0231027
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0231002
NCOR2 nuclear receptor corepressor 2 0.023098
ATRNL1 attractin-like 1 0.0229846
TMEM131 transmembrane protein 131 0.0229545
TMSB4X thymosin beta 4, X-linked 0.022775
FNDC3A fibronectin type III domain containing 3A 0.0224617
DENR density-regulated protein 0.0222811
SUCO SUN domain containing ossification factor 0.0222786
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.022181
MBNL1 muscleblind-like splicing regulator 1 0.02217
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 0.0221649
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 0.021849
KDM4B lysine (K)-specific demethylase 4B 0.0218016

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.107106
PRKG1 protein kinase, cGMP-dependent, type I -0.0922628
CENPF centromere protein F, 350/400kDa -0.0811509
SOX4 SRY (sex determining region Y)-box 4 -0.0745258
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0714229
CAMTA1 calmodulin binding transcription activator 1 -0.0702916
MB21D2 Mab-21 domain containing 2 -0.0689075
ZNF292 zinc finger protein 292 -0.0677243
RPS6 ribosomal protein S6 -0.0669844
PHF3 PHD finger protein 3 -0.062912
RPS19 ribosomal protein S19 -0.0553337
PRRC2C proline-rich coiled-coil 2C -0.0524744
ZFAND3 zinc finger, AN1-type domain 3 -0.0523196
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0516529
NAP1L1 nucleosome assembly protein 1-like 1 -0.0511177
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0510915
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0505237
JMJD1C jumonji domain containing 1C -0.0498217
PHF14 PHD finger protein 14 -0.0481635
QKI QKI, KH domain containing, RNA binding -0.0437564
MED13L mediator complex subunit 13-like -0.0435849
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0429883
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0426857
TPK1 thiamin pyrophosphokinase 1 -0.0426035
IGF2 insulin-like growth factor 2 -0.0422559
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0417914
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0414001
WAC WW domain containing adaptor with coiled-coil -0.0409893
RPS24 ribosomal protein S24 -0.0390383
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0388017
S100A9 S100 calcium binding protein A9 -0.0386309
RBM25 RNA binding motif protein 25 -0.0381562
RPL26 ribosomal protein L26 -0.0378889
CDC73 cell division cycle 73 -0.03781
SRPK2 SRSF protein kinase 2 -0.0377981
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0372748
SMC3 structural maintenance of chromosomes 3 -0.0371472
PNISR PNN-interacting serine/arginine-rich protein -0.0371356
GOLGA4 golgin A4 -0.0368909
CKAP5 cytoskeleton associated protein 5 -0.035813
IPO7 importin 7 -0.0357814
TUT4 terminal uridylyl transferase 4 -0.0354275
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0348462
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0345368
ZNF326 zinc finger protein 326 -0.0341458
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0338353
YBX1 Y box binding protein 1 -0.033718
HNRNPM heterogeneous nuclear ribonucleoprotein M -0.033634
MGP matrix Gla protein -0.0335349
SRSF11 serine/arginine-rich splicing factor 11 -0.0328338
RPL5 ribosomal protein L5 -0.0327537
RPL12 ribosomal protein L12 -0.0327526
CBX3 chromobox homolog 3 -0.0326872
KIF11 kinesin family member 11 -0.0324022
RAB7A RAB7A, member RAS oncogene family -0.0324009
CECR2 cat eye syndrome chromosome region, candidate 2 -0.0317599
SEM1 SEM1 26S proteasome subunit -0.0317265
ZNF827 zinc finger protein 827 -0.0314433
FBXW11 F-box and WD repeat domain containing 11 -0.0314199
MAP4 microtubule-associated protein 4 -0.0313714
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H -0.0310986
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0310274
RSL1D1 ribosomal L1 domain containing 1 -0.0310173
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.030774
RBBP6 retinoblastoma binding protein 6 -0.0304416
SAMD8 sterile alpha motif domain containing 8 -0.0300608
RREB1 ras responsive element binding protein 1 -0.0299774
STRN3 striatin, calmodulin binding protein 3 -0.0298548
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0296658
TRAF3 TNF receptor-associated factor 3 -0.0291937
ANKRD11 ankyrin repeat domain 11 -0.0288407
HMGB1 high mobility group box 1 -0.0287392
TULP4 tubby like protein 4 -0.0286988
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0286918
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0285913
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0284638
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0284582
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) -0.0284309
PEG10 paternally expressed 10 -0.0283255
TMF1 TATA element modulatory factor 1 -0.0277514
ENAH enabled homolog (Drosophila) -0.0276629
UBXN4 UBX domain protein 4 -0.0276591
RPL11 ribosomal protein L11 -0.0276446
FCHSD2 FCH and double SH3 domains 2 -0.0271465
TNIP1 TNFAIP3 interacting protein 1 -0.0271111
CREBRF CREB3 regulatory factor -0.0270405
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0268255
ARL13B ADP-ribosylation factor-like 13B -0.0267024
ATRN attractin -0.0266143
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) -0.0265912
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0264785
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0262842
SET SET nuclear proto-oncogene -0.0262784
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0260956
USP3 ubiquitin specific peptidase 3 -0.0260854
ACTN4 actinin, alpha 4 -0.0259165
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 -0.025843
GPBP1 GC-rich promoter binding protein 1 -0.0254954
DEK DEK proto-oncogene -0.0253431
RPS2 ribosomal protein S2 -0.0253428