Folic acid_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.329226
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.164945
IGFBP3 insulin-like growth factor binding protein 3 0.150789
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.150572
GPC6 glypican 6 0.125103
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.11752
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.114049
ENO1 enolase 1, (alpha) 0.0920882
ASPH aspartate beta-hydroxylase 0.0737784
FRMD4A FERM domain containing 4A 0.0712786
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0564385
BACE2 beta-site APP-cleaving enzyme 2 0.0503624
NLGN1 neuroligin 1 0.0488147
SETBP1 SET binding protein 1 0.0481619
WWTR1 WW domain containing transcription regulator 1 0.0477742
PCDH7 protocadherin 7 0.0474323
AKAP12 A kinase (PRKA) anchor protein 12 0.0463281
NPC1 Niemann-Pick disease, type C1 0.0447855
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0433151
VIM vimentin 0.0421716
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.039839
PKM pyruvate kinase, muscle 0.0392718
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0391541
PARVB parvin, beta 0.0383722
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0371711
PDIA4 protein disulfide isomerase family A, member 4 0.0370651
DST dystonin 0.0360639
TNNC1 troponin C type 1 (slow) 0.0349117
EXOC4 exocyst complex component 4 0.0348083
ACTN1 actinin, alpha 1 0.033642
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0334781
ARFGEF3 ARFGEF family member 3 0.0333245
PRELID2 PRELI domain containing 2 0.0327753
PYGL phosphorylase, glycogen, liver 0.0321431
ZSWIM5 zinc finger, SWIM-type containing 5 0.0316578
A2M alpha-2-macroglobulin 0.0315119
OXR1 oxidation resistance 1 0.0308067
NPAS2 neuronal PAS domain protein 2 0.0302522
RAD51B RAD51 paralog B 0.0290447
NAMPT nicotinamide phosphoribosyltransferase 0.0289909
LDHA lactate dehydrogenase A 0.0276277
LEF1 lymphoid enhancer-binding factor 1 0.0275748
ITGB8 integrin, beta 8 0.0275628
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0273949
TM4SF1 transmembrane 4 L six family member 1 0.027165
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.025715
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.025645
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0255796
COL19A1 collagen, type XIX, alpha 1 0.0252019
SHROOM4 shroom family member 4 0.0249195
NRP2 neuropilin 2 0.0245129
ZNF704 zinc finger protein 704 0.024126
MTERF1 mitochondrial transcription termination factor 1 0.0239532
ZFYVE28 zinc finger, FYVE domain containing 28 0.0239492
VMP1 vacuole membrane protein 1 0.0239207
SDCCAG8 serologically defined colon cancer antigen 8 0.0238885
IFI16 interferon, gamma-inducible protein 16 0.0238862
TPM4 tropomyosin 4 0.0234899
ACTG1 actin gamma 1 0.0233405
AHNAK AHNAK nucleoprotein 0.0232668
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0228279
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0224496
PUS7 pseudouridylate synthase 7 (putative) 0.022332
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0220239
CRYBG3 beta-gamma crystallin domain containing 3 0.0214074
PCLO piccolo presynaptic cytomatrix protein 0.0213652
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0211724
FAF1 Fas (TNFRSF6) associated factor 1 0.021069
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 0.0210304
TSC22D1 TSC22 domain family, member 1 0.0208603
OSMR oncostatin M receptor 0.0203631
SMYD3 SET and MYND domain containing 3 0.0203397
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0201319
IL6ST interleukin 6 signal transducer 0.020022
AGTPBP1 ATP/GTP binding protein 1 0.020015
ZYX zyxin 0.0198387
BPTF bromodomain PHD finger transcription factor 0.019415
ARL15 ADP-ribosylation factor-like 15 0.0192189
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0189122
SEPTIN9 septin 9 0.0188426
SRRM2 serine/arginine repetitive matrix 2 0.0187777
ICAM1 intercellular adhesion molecule 1 0.0185981
AHR aryl hydrocarbon receptor 0.0184979
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0183905
RCAN1 regulator of calcineurin 1 0.0183688
GMDS GDP-mannose 4,6-dehydratase 0.018322
RHOJ ras homolog family member J 0.0182479
BABAM2 BRISC and BRCA1 A complex member 2 0.0182341
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0181628
AFAP1 actin filament associated protein 1 0.0178391
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0175219
CTTNBP2 cortactin binding protein 2 0.0173673
MYH9 myosin, heavy chain 9, non-muscle 0.0173349
SFTPA2 surfactant protein A2 0.0173252
RHOBTB3 Rho-related BTB domain containing 3 0.0172609
JMJD1C jumonji domain containing 1C 0.0172342
TMEM255B transmembrane protein 255B 0.0171482
CANX calnexin 0.0170907
CLMN calmin (calponin-like, transmembrane) 0.0170276
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0168219

decreased expression

Symbol Name Standardized Value
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0932381
NDRG1 N-myc downstream regulated 1 -0.0831003
VGF VGF nerve growth factor inducible -0.0717008
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0715293
NBAS neuroblastoma amplified sequence -0.0679224
PTK2 protein tyrosine kinase 2 -0.0672088
CDC73 cell division cycle 73 -0.0644481
KMT2C lysine (K)-specific methyltransferase 2C -0.0641145
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0625389
KMT2E lysine (K)-specific methyltransferase 2E -0.0619695
RNF145 ring finger protein 145 -0.0585266
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0566847
FMNL2 formin-like 2 -0.0554072
IFRD1 interferon-related developmental regulator 1 -0.0515863
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0509611
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0490259
COPA coatomer protein complex, subunit alpha -0.04729
BRWD1 bromodomain and WD repeat domain containing 1 -0.0471539
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0468283
ZFAND3 zinc finger, AN1-type domain 3 -0.046709
WSB1 WD repeat and SOCS box containing 1 -0.045475
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.043817
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0427359
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0413673
NUP58 nucleoporin 58 -0.0410003
MT2A metallothionein 2A -0.0396265
PIAS2 protein inhibitor of activated STAT, 2 -0.039289
NPR2 natriuretic peptide receptor 2 -0.0392819
TMSB10 thymosin beta 10 -0.0378419
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.037772
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0375297
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0362153
SOX5 SRY (sex determining region Y)-box 5 -0.0356451
CHSY1 chondroitin sulfate synthase 1 -0.0356385
KDM3A lysine (K)-specific demethylase 3A -0.0353524
TNPO3 transportin 3 -0.0338117
MEF2A myocyte enhancer factor 2A -0.0333362
BIRC6 baculoviral IAP repeat containing 6 -0.0329752
WDR45B WD repeat domain 45B -0.0328277
GDF15 growth differentiation factor 15 -0.0328275
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0326593
TPD52 tumor protein D52 -0.0323309
DENND1A DENN/MADD domain containing 1A -0.0322833
HELZ helicase with zinc finger -0.0320846
HLA-B major histocompatibility complex, class I, B -0.0319787
NAP1L1 nucleosome assembly protein 1-like 1 -0.0312636
PRKD1 protein kinase D1 -0.0305522
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.030392
PTPRM protein tyrosine phosphatase, receptor type, M -0.0301358
HIPK2 homeodomain interacting protein kinase 2 -0.0296587
SBF2 SET binding factor 2 -0.0288632
CD109 CD109 molecule -0.0288343
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0287041
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0283763
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0281633
RBM33 RNA binding motif protein 33 -0.0280485
SCARB1 scavenger receptor class B, member 1 -0.0276251
CENPF centromere protein F, 350/400kDa -0.0274432
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0270713
RBM39 RNA binding motif protein 39 -0.0266975
ANKRD11 ankyrin repeat domain 11 -0.0265146
SETD5 SET domain containing 5 -0.0264877
GARS1 glycyl-tRNA synthetase 1 -0.0264806
PTCHD4 patched domain containing 4 -0.0264274
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0263083
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0262742
KDM5B lysine (K)-specific demethylase 5B -0.0262508
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0261038
NIPBL Nipped-B homolog (Drosophila) -0.0259413
UBE2H ubiquitin-conjugating enzyme E2H -0.0259159
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0258664
RCOR1 REST corepressor 1 -0.0255406
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0251204
FBXO42 F-box protein 42 -0.0250391
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0249774
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0249159
ANKRD12 ankyrin repeat domain 12 -0.0247874
HMCN1 hemicentin 1 -0.0247448
TAGLN2 transgelin 2 -0.0246602
RBM25 RNA binding motif protein 25 -0.024622
SFPQ splicing factor proline/glutamine-rich -0.0244889
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0244539
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0242729
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0241843
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0241456
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0239727
MT1X metallothionein 1X -0.0238456
CERT1 ceramide transporter 1 -0.0234385
ATP11B ATPase, class VI, type 11B -0.0231402
HSPG2 heparan sulfate proteoglycan 2 -0.023053
RAB7A RAB7A, member RAS oncogene family -0.0228656
ATP13A3 ATPase type 13A3 -0.0228162
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 -0.0225832
CABIN1 calcineurin binding protein 1 -0.0224312
COG5 component of oligomeric golgi complex 5 -0.0223034
RAB6A RAB6A, member RAS oncogene family -0.0221443
PDE4B phosphodiesterase 4B, cAMP-specific -0.0219165
CUL3 cullin 3 -0.0219029
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0214171
SNX13 sorting nexin 13 -0.0214132