Folic acid_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.169868
MEIS2 Meis homeobox 2 0.129742
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0748119
IGF2 insulin-like growth factor 2 0.0738528
DPH6 diphthamine biosynthesis 6 0.0736297
MAP1B microtubule-associated protein 1B 0.0699877
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0657083
TPST1 tyrosylprotein sulfotransferase 1 0.0644236
MYO6 myosin VI 0.0565008
TRIO trio Rho guanine nucleotide exchange factor 0.0551888
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0547809
FHIT fragile histidine triad 0.0525704
AOPEP aminopeptidase O (putative) 0.0520784
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0500897
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0493793
PTEN phosphatase and tensin homolog 0.0464729
FMN1 formin 1 0.0464112
PRRC2C proline-rich coiled-coil 2C 0.0458123
AUTS2 autism susceptibility candidate 2 0.0456243
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0452689
LIMCH1 LIM and calponin homology domains 1 0.0449329
TENT5A terminal nucleotidyltransferase 5A 0.0448884
CD36 CD36 molecule (thrombospondin receptor) 0.0446308
PLPP1 phospholipid phosphatase 1 0.043994
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0433199
AKAP12 A kinase (PRKA) anchor protein 12 0.0426591
NRP1 neuropilin 1 0.0425149
PTPRE protein tyrosine phosphatase, receptor type, E 0.0414652
KLHL13 kelch-like family member 13 0.0400567
DNM3 dynamin 3 0.0398592
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0392306
ANGPT1 angiopoietin 1 0.0388308
PACS1 phosphofurin acidic cluster sorting protein 1 0.0381585
NRG1 neuregulin 1 0.037652
CEMIP cell migration inducing protein, hyaluronan binding 0.0361185
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0356432
ARHGAP24 Rho GTPase activating protein 24 0.035305
IFI16 interferon, gamma-inducible protein 16 0.0352697
SYT1 synaptotagmin I 0.0351191
TRPA1 transient receptor potential cation channel, subfamily A, member 1 0.0347255
EEF2 eukaryotic translation elongation factor 2 0.033877
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0331451
DKK2 dickkopf WNT signaling pathway inhibitor 2 0.0329006
APP amyloid beta (A4) precursor protein 0.0325609
SLITRK6 SLIT and NTRK-like family, member 6 0.0319344
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0316294
GNG2 guanine nucleotide binding protein (G protein), gamma 2 0.0315468
ATXN1 ataxin 1 0.0314683
SOS1 son of sevenless homolog 1 (Drosophila) 0.0314358
SKIL SKI-like proto-oncogene 0.0314141
TCF12 transcription factor 12 0.0313667
BCAS3 breast carcinoma amplified sequence 3 0.0312623
SRRM2 serine/arginine repetitive matrix 2 0.0312254
PRRC2B proline-rich coiled-coil 2B 0.030887
DLC1 DLC1 Rho GTPase activating protein 0.0308131
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0304635
ANO6 anoctamin 6 0.0302374
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0300062
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0297254
DNMBP dynamin binding protein 0.029642
EXOC4 exocyst complex component 4 0.0291929
TBX2 T-box 2 0.029178
SRPK2 SRSF protein kinase 2 0.0289797
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0289123
CARD16 caspase recruitment domain family, member 16 0.02885
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0286129
USP34 ubiquitin specific peptidase 34 0.0285898
FOXP1 forkhead box P1 0.0283322
PTK2 protein tyrosine kinase 2 0.0281481
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0276784
RO60 Ro60, Y RNA binding protein 0.0275445
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 0.0274253
DUSP10 dual specificity phosphatase 10 0.0273722
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0270632
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) 0.0268976
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0268186
UBE2H ubiquitin-conjugating enzyme E2H 0.0267623
RFX7 regulatory factor X, 7 0.0267144
GNAS GNAS complex locus 0.0264865
TBC1D4 TBC1 domain family, member 4 0.026444
PTPRK protein tyrosine phosphatase, receptor type, K 0.0263779
ZNF292 zinc finger protein 292 0.0260138
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0259073
MEF2A myocyte enhancer factor 2A 0.0256815
SENP6 SUMO1/sentrin specific peptidase 6 0.0252906
GATA3 GATA binding protein 3 0.0251583
ANKRD17 ankyrin repeat domain 17 0.0248254
PICALM phosphatidylinositol binding clathrin assembly protein 0.0247566
COL4A5 collagen, type IV, alpha 5 0.0246309
ZFHX3 zinc finger homeobox 3 0.0245029
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.024381
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0243251
AFF4 AF4/FMR2 family, member 4 0.0240227
TPR translocated promoter region, nuclear basket protein 0.0239622
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0238713
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.02381
SSBP3 single stranded DNA binding protein 3 0.0237744
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.0235558
ZBTB20 zinc finger and BTB domain containing 20 0.0235528
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0235379

decreased expression

Symbol Name Standardized Value
VCL vinculin -0.153053
EXT1 exostosin glycosyltransferase 1 -0.120328
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0931342
TRIB2 tribbles pseudokinase 2 -0.0901996
LSAMP limbic system-associated membrane protein -0.0791598
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0651657
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.064105
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.058656
RPTOR regulatory associated protein of MTOR, complex 1 -0.0543822
MCL1 myeloid cell leukemia 1 -0.0506193
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0501126
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0469888
TPM1 tropomyosin 1 (alpha) -0.0465872
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0456964
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0448419
MAML2 mastermind-like 2 (Drosophila) -0.0430493
FNDC3A fibronectin type III domain containing 3A -0.0430417
AEBP2 AE binding protein 2 -0.0415813
MYO1E myosin IE -0.0407046
EGFR epidermal growth factor receptor -0.0405083
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0398807
PTPRD protein tyrosine phosphatase, receptor type, D -0.0395894
FNDC3B fibronectin type III domain containing 3B -0.0395832
GSE1 Gse1 coiled-coil protein -0.0380382
ACTG1 actin gamma 1 -0.0377878
GMDS GDP-mannose 4,6-dehydratase -0.0369925
ACTN1 actinin, alpha 1 -0.0364704
ARF1 ADP-ribosylation factor 1 -0.0363743
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0355825
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0338908
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0338628
COL1A1 collagen, type I, alpha 1 -0.0338471
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.032908
CUX1 cut-like homeobox 1 -0.0324349
IGF1R insulin-like growth factor 1 receptor -0.0324009
SEPTIN9 septin 9 -0.032232
CORIN corin, serine peptidase -0.0320441
ERRFI1 ERBB receptor feedback inhibitor 1 -0.031965
KDM3A lysine (K)-specific demethylase 3A -0.0318441
MORF4L2 mortality factor 4 like 2 -0.0315669
CANX calnexin -0.0312729
EGR1 early growth response 1 -0.0310232
HSPA8 heat shock 70kDa protein 8 -0.0305276
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0297258
SOD2 superoxide dismutase 2, mitochondrial -0.0294312
CCDC47 coiled-coil domain containing 47 -0.0292857
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.029262
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0290178
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0286905
PDLIM5 PDZ and LIM domain 5 -0.0285199
MARCHF6 membrane associated ring-CH-type finger 6 -0.0283796
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0279774
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0279451
INTS6 integrator complex subunit 6 -0.0276335
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.0275366
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0273455
FRMD4A FERM domain containing 4A -0.0271176
PCNP PEST proteolytic signal containing nuclear protein -0.0268194
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0266965
SLC38A2 solute carrier family 38, member 2 -0.0264043
RNF150 ring finger protein 150 -0.0262543
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0260503
NREP neuronal regeneration related protein -0.0257411
PIBF1 progesterone immunomodulatory binding factor 1 -0.0257209
AFF3 AF4/FMR2 family, member 3 -0.0256748
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0256558
COL3A1 collagen, type III, alpha 1 -0.0254418
DNAH14 dynein, axonemal, heavy chain 14 -0.0252779
RRBP1 ribosome binding protein 1 -0.0251838
GOLGB1 golgin B1 -0.0251234
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.024911
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0246111
BRWD1 bromodomain and WD repeat domain containing 1 -0.0245451
VGF VGF nerve growth factor inducible -0.0244279
SMAD3 SMAD family member 3 -0.0243107
IER3 immediate early response 3 -0.0242925
CLINT1 clathrin interactor 1 -0.0241447
CTBP2 C-terminal binding protein 2 -0.023892
ANK2 ankyrin 2, neuronal -0.0238061
DACH2 dachshund family transcription factor 2 -0.0236371
PCDH11Y protocadherin 11 Y-linked -0.0234186
LMO7 LIM domain 7 -0.0233673
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0232556
RPL23 ribosomal protein L23 -0.0231554
DIAPH2 diaphanous-related formin 2 -0.0231257
CDH13 cadherin 13 -0.0231097
KIAA1217 KIAA1217 -0.0230894
DTNA dystrobrevin, alpha -0.0230245
SCFD1 sec1 family domain containing 1 -0.0229858
EFNA5 ephrin-A5 -0.02297
JAK1 Janus kinase 1 -0.0228964
FAM107B family with sequence similarity 107, member B -0.0228661
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0228057
PSEN1 presenilin 1 -0.0228046
RAP1B RAP1B, member of RAS oncogene family -0.0227137
THOC2 THO complex 2 -0.0225779
ACTN4 actinin, alpha 4 -0.02257
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0225457
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0224887
DDIT4 DNA-damage-inducible transcript 4 -0.0224849