Folic acid_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.25893
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.255993
CD44 CD44 molecule (Indian blood group) 0.15874
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.146548
DST dystonin 0.118444
HMGA2 high mobility group AT-hook 2 0.11451
NDRG1 N-myc downstream regulated 1 0.105526
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.100144
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.096714
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0962359
COL6A3 collagen, type VI, alpha 3 0.0936235
AHNAK AHNAK nucleoprotein 0.0906856
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.090634
ASPH aspartate beta-hydroxylase 0.0787873
ENO1 enolase 1, (alpha) 0.0745496
ANXA2 annexin A2 0.0728764
MYH9 myosin, heavy chain 9, non-muscle 0.0727833
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0701296
VIM vimentin 0.0676258
FNDC3B fibronectin type III domain containing 3B 0.0665909
IGF2 insulin-like growth factor 2 0.0626732
EXT1 exostosin glycosyltransferase 1 0.0625351
MAP1B microtubule-associated protein 1B 0.0622268
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0603585
MYO10 myosin X 0.0603161
ERRFI1 ERBB receptor feedback inhibitor 1 0.0594037
RAI14 retinoic acid induced 14 0.0593086
PKM pyruvate kinase, muscle 0.0590728
COL6A1 collagen, type VI, alpha 1 0.0564331
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0546826
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0528542
DNMBP dynamin binding protein 0.0515556
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0510239
CLIC4 chloride intracellular channel 4 0.0490576
CDCP1 CUB domain containing protein 1 0.0474523
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0470333
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0470312
TRIO trio Rho guanine nucleotide exchange factor 0.0467323
MSN moesin 0.0461283
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0447734
JARID2 jumonji, AT rich interactive domain 2 0.0435062
NALF1 NALCN channel auxiliary factor 1 0.0432709
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.043205
PGK1 phosphoglycerate kinase 1 0.0429329
VCL vinculin 0.0427172
SMAD3 SMAD family member 3 0.0423434
MCL1 myeloid cell leukemia 1 0.0418719
PRELID2 PRELI domain containing 2 0.0418371
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0416537
TGFBI transforming growth factor, beta-induced, 68kDa 0.0410756
FLNB filamin B, beta 0.0408442
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0407034
GLIS3 GLIS family zinc finger 3 0.0401534
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0400995
PTK2 protein tyrosine kinase 2 0.0400734
ACTN4 actinin, alpha 4 0.0384409
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0368469
LDHA lactate dehydrogenase A 0.0368122
PRKCA protein kinase C, alpha 0.0364648
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0361094
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0357916
STC1 stanniocalcin 1 0.0357547
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.035463
TENM2 teneurin transmembrane protein 2 0.0352458
MPRIP myosin phosphatase Rho interacting protein 0.0351648
TMSB10 thymosin beta 10 0.0349383
ELL2 elongation factor, RNA polymerase II, 2 0.0346818
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0345772
LOX lysyl oxidase 0.0342561
COL5A1 collagen, type V, alpha 1 0.0341277
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0339465
SEPTIN9 septin 9 0.033862
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0337045
PLAUR plasminogen activator, urokinase receptor 0.0331313
IGFBP3 insulin-like growth factor binding protein 3 0.032881
TUBB6 tubulin, beta 6 class V 0.0326356
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0324252
RRM2 ribonucleotide reductase M2 0.0323686
MACF1 microtubule-actin crosslinking factor 1 0.0315229
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0306772
LPP LIM domain containing preferred translocation partner in lipoma 0.0306671
ZBTB38 zinc finger and BTB domain containing 38 0.0303484
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0296475
VEGFC vascular endothelial growth factor C 0.0296264
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0294934
DIAPH2 diaphanous-related formin 2 0.0288777
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0287558
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0285835
RAD51B RAD51 paralog B 0.0283004
BICD1 bicaudal D homolog 1 (Drosophila) 0.0282163
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0281063
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0280193
VMP1 vacuole membrane protein 1 0.0279842
LOXL2 lysyl oxidase-like 2 0.0278593
NUMB numb homolog (Drosophila) 0.027062
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0270617
ETV6 ets variant 6 0.0266958
PPARD peroxisome proliferator-activated receptor delta 0.0265232
TGFB1 transforming growth factor, beta 1 0.0264132
SMYD3 SET and MYND domain containing 3 0.0262713

decreased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 -0.0332058
TPT1 tumor protein, translationally-controlled 1 -0.0306688
FNIP1 folliculin interacting protein 1 -0.0202107
GOLGB1 golgin B1 -0.0195428
AKAP9 A kinase (PRKA) anchor protein 9 -0.0183375
MT2A metallothionein 2A -0.0172498
RPS8 ribosomal protein S8 -0.0168373
GOLGA4 golgin A4 -0.0162605
RPL9 ribosomal protein L9 -0.0155778
RPL31 ribosomal protein L31 -0.0155395
RPL12 ribosomal protein L12 -0.0154998
AFF3 AF4/FMR2 family, member 3 -0.0154905
PHF3 PHD finger protein 3 -0.0154267
RPL37A ribosomal protein L37a -0.0152608
RPL34 ribosomal protein L34 -0.01469
RPL23 ribosomal protein L23 -0.0141053
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0135912
NAP1L1 nucleosome assembly protein 1-like 1 -0.0134985
BACE2 beta-site APP-cleaving enzyme 2 -0.0134647
RPL35A ribosomal protein L35a -0.0133356
NAV2 neuron navigator 2 -0.0130778
RPS24 ribosomal protein S24 -0.012563
ADAM32 ADAM metallopeptidase domain 32 -0.0124455
MT1E metallothionein 1E -0.0118065
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0115669
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0114985
MMP12 matrix metallopeptidase 12 -0.0113695
AEBP2 AE binding protein 2 -0.0110378
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0110153
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0109924
RPL11 ribosomal protein L11 -0.0109677
DENND5B DENN/MADD domain containing 5B -0.0109292
SQSTM1 sequestosome 1 -0.0106572
NUP98 nucleoporin 98kDa -0.0104053
TXLNG taxilin gamma -0.010355
IL11 interleukin 11 -0.0103051
CCDC138 coiled-coil domain containing 138 -0.0100764
RPL37 ribosomal protein L37 -0.0098952
AKAP12 A kinase (PRKA) anchor protein 12 -0.0097934
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.00968925
PNISR PNN-interacting serine/arginine-rich protein -0.00967635
RPS3 ribosomal protein S3 -0.00955302
GRB10 growth factor receptor-bound protein 10 -0.00935655
RPL26 ribosomal protein L26 -0.00930149
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.00929267
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0091799
ERLEC1 endoplasmic reticulum lectin 1 -0.00912666
ARHGAP5 Rho GTPase activating protein 5 -0.00906937
ZFC3H1 zinc finger, C3H1-type containing -0.00894458
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.00878515
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.00863172
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.00851486
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.00839222
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.00813435
HSPG2 heparan sulfate proteoglycan 2 -0.0081074
NKTR natural killer cell triggering receptor -0.00804911
FBXL2 F-box and leucine-rich repeat protein 2 -0.00802247
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.00801905
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.00798718
RBM25 RNA binding motif protein 25 -0.00792414
TTC3 tetratricopeptide repeat domain 3 -0.0079177
ZRANB2 zinc finger, RAN-binding domain containing 2 -0.00790638
ZCCHC7 zinc finger, CCHC domain containing 7 -0.00787752
AFTPH aftiphilin -0.00787439
NABP1 nucleic acid binding protein 1 -0.0078608
GOLGA2 golgin A2 -0.00780668
SEC62 SEC62 homolog (S. cerevisiae) -0.00779935
CLASRP CLK4-associating serine/arginine rich protein -0.00775909
ZHX2 zinc fingers and homeoboxes 2 -0.00775719
OGA O-GlcNAcase -0.0077291
TMEM41B transmembrane protein 41B -0.00766018
RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) -0.00765006
GPC5 glypican 5 -0.00758095
EVI5 ecotropic viral integration site 5 -0.00754097
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.00752321
RAB7A RAB7A, member RAS oncogene family -0.00749554
RPS12 ribosomal protein S12 -0.00741373
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.00738746
PGM3 phosphoglucomutase 3 -0.00738431
RPS27A ribosomal protein S27a -0.00738098
SNX14 sorting nexin 14 -0.00730761
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.00729057
RPS13 ribosomal protein S13 -0.00724936
EIF5B eukaryotic translation initiation factor 5B -0.00721499
STPG4 sperm-tail PG-rich repeat containing 4 -0.00712336
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.00708601
USP53 ubiquitin specific peptidase 53 -0.00694278
WNT2B wingless-type MMTV integration site family, member 2B -0.00693094
TVP23C-CDRT4 TVP23C-CDRT4 readthrough -0.00690347
TRPS1 trichorhinophalangeal syndrome I -0.00684706
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta -0.00683391
RBM39 RNA binding motif protein 39 -0.00682865
PCF11 PCF11 cleavage and polyadenylation factor subunit -0.00681045
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.00680899
TIAM2 T-cell lymphoma invasion and metastasis 2 -0.00677852
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.00676015
UGCG UDP-glucose ceramide glucosyltransferase -0.00674927
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.00674713
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0067339
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 -0.00668604