Folic acid_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRAMD1B GRAM domain containing 1B 0.15802
EGFR epidermal growth factor receptor 0.153427
NDRG1 N-myc downstream regulated 1 0.133655
THSD4 thrombospondin, type I, domain containing 4 0.0939478
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0910299
FAM13A family with sequence similarity 13, member A 0.0808001
MCL1 myeloid cell leukemia 1 0.0737936
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0704737
SLTM SAFB-like, transcription modulator 0.0699016
PDE4D phosphodiesterase 4D, cAMP-specific 0.0623784
SPAG9 sperm associated antigen 9 0.0609844
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0597801
GRB10 growth factor receptor-bound protein 10 0.0591232
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.055413
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0551959
CEMIP cell migration inducing protein, hyaluronan binding 0.0520129
SMAD3 SMAD family member 3 0.0496771
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0486667
FNDC3B fibronectin type III domain containing 3B 0.0456177
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0451913
ELL2 elongation factor, RNA polymerase II, 2 0.0445824
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0439072
CES1 carboxylesterase 1 0.043771
TSC22D2 TSC22 domain family, member 2 0.0423795
LRP1B low density lipoprotein receptor-related protein 1B 0.0422605
GSK3B glycogen synthase kinase 3 beta 0.0419636
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0410024
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0404814
LGALS12 lectin, galactoside-binding, soluble, 12 0.0384436
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0378924
BCAR3 breast cancer anti-estrogen resistance 3 0.0376004
INTS6 integrator complex subunit 6 0.0366948
TBC1D22A TBC1 domain family, member 22A 0.0362976
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0359912
MYH9 myosin, heavy chain 9, non-muscle 0.0357781
PYGL phosphorylase, glycogen, liver 0.0351375
PDE8A phosphodiesterase 8A 0.0349473
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0343335
SMYD3 SET and MYND domain containing 3 0.0342243
NPAS2 neuronal PAS domain protein 2 0.0341253
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0341208
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0339431
GCLC glutamate-cysteine ligase, catalytic subunit 0.033848
DOCK4 dedicator of cytokinesis 4 0.0323855
APLP2 amyloid beta (A4) precursor-like protein 2 0.0322644
CAMTA1 calmodulin binding transcription activator 1 0.032117
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0320979
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0319598
BMP6 bone morphogenetic protein 6 0.0315968
HELZ helicase with zinc finger 0.0310452
KCMF1 potassium channel modulatory factor 1 0.030962
RUNX1 runt-related transcription factor 1 0.0307978
NGLY1 N-glycanase 1 0.0306433
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0306151
TES testin LIM domain protein 0.0305635
ARRDC3 arrestin domain containing 3 0.0292904
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0292314
ZNF292 zinc finger protein 292 0.0291868
EXT1 exostosin glycosyltransferase 1 0.0291509
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.029131
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0287423
CCNL1 cyclin L1 0.0284573
LRP12 low density lipoprotein receptor-related protein 12 0.0284026
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0283653
UBA6 ubiquitin-like modifier activating enzyme 6 0.0282988
ATP11A ATPase, class VI, type 11A 0.0282898
ATXN1 ataxin 1 0.0281729
PCBP2 poly(rC) binding protein 2 0.0273291
PTEN phosphatase and tensin homolog 0.0270464
POTEF POTE ankyrin domain family, member F 0.0269081
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0268916
FNIP1 folliculin interacting protein 1 0.0266114
ATOSA atos homolog A 0.0261693
KDM4C lysine (K)-specific demethylase 4C 0.0257338
ANO6 anoctamin 6 0.0256336
CUL4A cullin 4A 0.0255594
MSN moesin 0.0254968
ARF4 ADP-ribosylation factor 4 0.0252604
PM20D1 peptidase M20 domain containing 1 0.0250856
SHB Src homology 2 domain containing adaptor protein B 0.0249711
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0249551
BLZF1 basic leucine zipper nuclear factor 1 0.0248138
YAP1 Yes-associated protein 1 0.0247647
GPHN gephyrin 0.0245907
NBAS neuroblastoma amplified sequence 0.0245642
KDM6A lysine (K)-specific demethylase 6A 0.0243837
ANKRD11 ankyrin repeat domain 11 0.0239923
SAMD4A sterile alpha motif domain containing 4A 0.0239439
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0236911
UBC ubiquitin C 0.0233944
SEC31A SEC31 homolog A (S. cerevisiae) 0.02322
MORF4L2 mortality factor 4 like 2 0.0230956
PKM pyruvate kinase, muscle 0.023017
ERRFI1 ERBB receptor feedback inhibitor 1 0.0223303
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0221085
HOOK2 hook microtubule-tethering protein 2 0.021696
SFPQ splicing factor proline/glutamine-rich 0.0214832
MYO5B myosin VB 0.0214338
RPL3 ribosomal protein L3 0.0213047
VEGFC vascular endothelial growth factor C 0.0212657

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.192871
TMSB10 thymosin beta 10 -0.118345
CAV1 caveolin 1, caveolae protein, 22kDa -0.111437
TXNRD1 thioredoxin reductase 1 -0.098679
AKR1C1 aldo-keto reductase family 1, member C1 -0.0797692
LAMC2 laminin, gamma 2 -0.0768021
MT2A metallothionein 2A -0.0756212
BZW1 basic leucine zipper and W2 domains 1 -0.0684019
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0672991
IFI6 interferon, alpha-inducible protein 6 -0.0640445
S100A10 S100 calcium binding protein A10 -0.062518
RNF213 ring finger protein 213 -0.0621443
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0612028
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0607576
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0599232
TPT1 tumor protein, translationally-controlled 1 -0.059737
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0589611
LAMA4 laminin, alpha 4 -0.0552504
B2M beta-2-microglobulin -0.0524984
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0509961
ANXA2 annexin A2 -0.0509468
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0443703
CST3 cystatin C -0.0440644
AHNAK AHNAK nucleoprotein -0.043962
STC1 stanniocalcin 1 -0.0420295
DSPP dentin sialophosphoprotein -0.0419994
ACTG1 actin gamma 1 -0.0418584
RIGI RNA sensor RIG-I -0.0416901
CCND1 cyclin D1 -0.041459
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0411933
PTMA prothymosin, alpha -0.0394478
TRIM56 tripartite motif containing 56 -0.0393496
RPS3 ribosomal protein S3 -0.0374313
HLA-B major histocompatibility complex, class I, B -0.037339
IGFBP5 insulin-like growth factor binding protein 5 -0.0371189
KRT8 keratin 8, type II -0.0371096
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0365668
SEC61G Sec61 gamma subunit -0.035814
LOC102724023 ES1 protein homolog, mitochondrial -0.0357184
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0332581
RAB27B RAB27B, member RAS oncogene family -0.0331758
SP100 SP100 nuclear antigen -0.0324155
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0321961
C15ORF48 chromosome 15 open reading frame 48 -0.0321044
KRT18 keratin 18, type I -0.0319759
RPL34 ribosomal protein L34 -0.0319414
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.031895
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0318537
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.031593
FTL ferritin, light polypeptide -0.0311689
RPS24 ribosomal protein S24 -0.0308676
RAB10 RAB10, member RAS oncogene family -0.0307567
RBBP6 retinoblastoma binding protein 6 -0.0307309
ZMYND8 zinc finger, MYND-type containing 8 -0.0304262
TAOK3 TAO kinase 3 -0.0294809
NCOA7 nuclear receptor coactivator 7 -0.0290609
MYOF myoferlin -0.028742
PRRC2C proline-rich coiled-coil 2C -0.0286051
AKAP12 A kinase (PRKA) anchor protein 12 -0.0283144
MT1X metallothionein 1X -0.0282729
SLC38A1 solute carrier family 38, member 1 -0.0274932
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0274015
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0273966
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0273828
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0269818
PATJ PATJ crumbs cell polarity complex component -0.0267769
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.026515
KRT7 keratin 7, type II -0.0263295
LOC112694756 uncharaterized LOC112694756 -0.0262496
LDHA lactate dehydrogenase A -0.0262342
ANKRD12 ankyrin repeat domain 12 -0.0261753
PGK1 phosphoglycerate kinase 1 -0.0260016
TNS3 tensin 3 -0.0258976
PMP22 peripheral myelin protein 22 -0.0256348
SPTSSA serine palmitoyltransferase, small subunit A -0.0253032
LAMB3 laminin, beta 3 -0.0252672
WSB1 WD repeat and SOCS box containing 1 -0.025251
MX1 MX dynamin-like GTPase 1 -0.0251953
EPCAM epithelial cell adhesion molecule -0.0248782
KRT19 keratin 19, type I -0.0241923
IGFBP3 insulin-like growth factor binding protein 3 -0.0240715
KMT2A lysine (K)-specific methyltransferase 2A -0.0239594
CP ceruloplasmin (ferroxidase) -0.0239241
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0236932
SAMD9 sterile alpha motif domain containing 9 -0.0236782
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.023566
VDAC1 voltage-dependent anion channel 1 -0.0233474
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.023227
GM2A GM2 ganglioside activator -0.023147
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0231344
RAD21 RAD21 homolog (S. pombe) -0.0229544
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -0.02281
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0226349
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0221666
AHNAK2 AHNAK nucleoprotein 2 -0.0221223
MCU mitochondrial calcium uniporter -0.0220017
NSUN6 NOP2/Sun domain family, member 6 -0.0217494
BIRC3 baculoviral IAP repeat containing 3 -0.0215042
CTSL cathepsin L -0.0213879
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough -0.0212813