Folic acid_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.226866
FTH1 ferritin, heavy polypeptide 1 0.160314
MCL1 myeloid cell leukemia 1 0.113182
PM20D1 peptidase M20 domain containing 1 0.10657
FTL ferritin, light polypeptide 0.0962456
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0921185
DOCK4 dedicator of cytokinesis 4 0.0754113
FNDC3B fibronectin type III domain containing 3B 0.0609674
WWOX WW domain containing oxidoreductase 0.0559628
POTEF POTE ankyrin domain family, member F 0.054583
GRAMD1B GRAM domain containing 1B 0.0533972
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0528473
PCBP2 poly(rC) binding protein 2 0.0485281
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0479381
SMOC1 SPARC related modular calcium binding 1 0.0454845
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0453224
CCNL1 cyclin L1 0.0429118
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0394651
PFN1 profilin 1 0.0388995
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0385355
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0384988
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0383271
RPL3 ribosomal protein L3 0.0381491
ELL2 elongation factor, RNA polymerase II, 2 0.0372723
BMP6 bone morphogenetic protein 6 0.0370205
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0366508
ZFAND3 zinc finger, AN1-type domain 3 0.0351274
RTN4 reticulon 4 0.0348219
ARHGAP26 Rho GTPase activating protein 26 0.0339669
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.033781
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0334838
PDLIM5 PDZ and LIM domain 5 0.0330193
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0330133
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0329245
BRD2 bromodomain containing 2 0.0325516
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0320296
PKM pyruvate kinase, muscle 0.0313289
MYH9 myosin, heavy chain 9, non-muscle 0.0313118
SAMD4A sterile alpha motif domain containing 4A 0.0312304
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0306322
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0301694
SPRED2 sprouty-related, EVH1 domain containing 2 0.0300875
FLNA filamin A, alpha 0.0300659
VMP1 vacuole membrane protein 1 0.0289707
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0289386
GLS2 glutaminase 2 (liver, mitochondrial) 0.0288785
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0286661
BZW2 basic leucine zipper and W2 domains 2 0.0282122
PDE8A phosphodiesterase 8A 0.0279207
VEZT vezatin, adherens junctions transmembrane protein 0.0276603
ZNF292 zinc finger protein 292 0.0270908
RUNX1 runt-related transcription factor 1 0.0269336
TPM3 tropomyosin 3 0.0265725
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0265193
ADAM9 ADAM metallopeptidase domain 9 0.0265138
APLP2 amyloid beta (A4) precursor-like protein 2 0.0264533
ATXN1 ataxin 1 0.0261181
OSBPL9 oxysterol binding protein-like 9 0.0260718
FMNL2 formin-like 2 0.0254867
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0249458
ATP11A ATPase, class VI, type 11A 0.0245901
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0245708
MTMR3 myotubularin related protein 3 0.0243948
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0242786
EEF2 eukaryotic translation elongation factor 2 0.0240697
PTPRM protein tyrosine phosphatase, receptor type, M 0.0239766
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0236311
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0235487
PDE10A phosphodiesterase 10A 0.0234542
MSN moesin 0.0234296
YBX1 Y box binding protein 1 0.0227403
EIF5 eukaryotic translation initiation factor 5 0.0225013
MAML3 mastermind-like 3 (Drosophila) 0.0222006
HSPA8 heat shock 70kDa protein 8 0.0220582
ZSWIM6 zinc finger, SWIM-type containing 6 0.0220526
PDIA6 protein disulfide isomerase family A, member 6 0.0216946
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0216108
COPA coatomer protein complex, subunit alpha 0.0215843
UBASH3B ubiquitin associated and SH3 domain containing B 0.0213351
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0211991
MRTFA myocardin related transcription factor A 0.0210363
DIAPH1 diaphanous-related formin 1 0.0209953
MYOF myoferlin 0.0209304
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 0.0208278
RNF145 ring finger protein 145 0.0206062
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0205271
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.020306
KIAA0319 KIAA0319 0.020245
SFPQ splicing factor proline/glutamine-rich 0.0200169
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0199897
PLS3 plastin 3 0.0198545
TPD52 tumor protein D52 0.0197482
YAP1 Yes-associated protein 1 0.0197308
FGB fibrinogen beta chain 0.0196914
NXF1 nuclear RNA export factor 1 0.0196031
DENND4A DENN/MADD domain containing 4A 0.0191912
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0191768
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0190482
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.018914
ZNF277 zinc finger protein 277 0.0188284

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.178034
MT2A metallothionein 2A -0.0895721
IER3 immediate early response 3 -0.0793163
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0771328
AKAP12 A kinase (PRKA) anchor protein 12 -0.0760343
TM4SF1 transmembrane 4 L six family member 1 -0.0726622
TXNRD1 thioredoxin reductase 1 -0.0720179
CAVIN1 caveolae associated protein 1 -0.0708476
ACTG1 actin gamma 1 -0.0688011
ERBIN erbb2 interacting protein -0.0671218
TPT1 tumor protein, translationally-controlled 1 -0.0652591
STC1 stanniocalcin 1 -0.0644013
PTMA prothymosin, alpha -0.0636087
HDAC9 histone deacetylase 9 -0.0629204
C15ORF48 chromosome 15 open reading frame 48 -0.0606233
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0553334
LDHA lactate dehydrogenase A -0.0519522
SLC38A2 solute carrier family 38, member 2 -0.0482276
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.041847
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0402158
EIF1 eukaryotic translation initiation factor 1 -0.0400999
RAD21 RAD21 homolog (S. pombe) -0.0393707
AHNAK AHNAK nucleoprotein -0.0391447
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0390929
RSL1D1 ribosomal L1 domain containing 1 -0.0390892
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0385397
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0366625
RPS27A ribosomal protein S27a -0.0355087
RPL37A ribosomal protein L37a -0.0351632
IGF2 insulin-like growth factor 2 -0.0348318
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0344537
EGFR epidermal growth factor receptor -0.0342283
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.033383
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0331242
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0324553
BABAM2 BRISC and BRCA1 A complex member 2 -0.0316355
S100A6 S100 calcium binding protein A6 -0.0316314
KIF5B kinesin family member 5B -0.0315355
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0313036
RPL23 ribosomal protein L23 -0.0312942
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0311111
WDR43 WD repeat domain 43 -0.0309988
KPNB1 karyopherin (importin) beta 1 -0.0309701
RPS24 ribosomal protein S24 -0.0307183
THBS1 thrombospondin 1 -0.0306971
TPM4 tropomyosin 4 -0.0303485
ENO1 enolase 1, (alpha) -0.0302532
RPS8 ribosomal protein S8 -0.0298618
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.029761
BZW1 basic leucine zipper and W2 domains 1 -0.0296944
RPL31 ribosomal protein L31 -0.0291826
IGFBP4 insulin-like growth factor binding protein 4 -0.0291456
AK1 adenylate kinase 1 -0.0291006
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0290831
KDM3A lysine (K)-specific demethylase 3A -0.0284547
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0281383
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0280428
VDAC1 voltage-dependent anion channel 1 -0.0280259
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0279738
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0273912
S100A10 S100 calcium binding protein A10 -0.0273573
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0270931
RAB10 RAB10, member RAS oncogene family -0.0263147
PATJ PATJ crumbs cell polarity complex component -0.0248886
HLA-B major histocompatibility complex, class I, B -0.0247331
MYL12B myosin, light chain 12B, regulatory -0.0246808
NAP1L1 nucleosome assembly protein 1-like 1 -0.0245176
NRG1 neuregulin 1 -0.0244737
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0244228
RPL34 ribosomal protein L34 -0.0240418
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0239073
ZFHX3 zinc finger homeobox 3 -0.0237458
SEPTIN7 septin 7 -0.0237121
SRGN serglycin -0.0236568
ACACA acetyl-CoA carboxylase alpha -0.0232348
HLA-E major histocompatibility complex, class I, E -0.0230108
VCL vinculin -0.02285
MAP1B microtubule-associated protein 1B -0.0225033
ZMYND8 zinc finger, MYND-type containing 8 -0.0223824
TRIP11 thyroid hormone receptor interactor 11 -0.0222956
RASAL2 RAS protein activator like 2 -0.0221571
CDK12 cyclin-dependent kinase 12 -0.0221067
PGK1 phosphoglycerate kinase 1 -0.0220945
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0219467
RPL26 ribosomal protein L26 -0.021383
SVIL supervillin -0.0208743
CFLAR CASP8 and FADD-like apoptosis regulator -0.0207736
RPL11 ribosomal protein L11 -0.0207727
CHD9 chromodomain helicase DNA binding protein 9 -0.0207208
HMGA2 high mobility group AT-hook 2 -0.0202156
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0202099
BICC1 BicC family RNA binding protein 1 -0.0200802
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0199007
CENPF centromere protein F, 350/400kDa -0.019824
CLIP1 CAP-GLY domain containing linker protein 1 -0.0197152
SH3KBP1 SH3-domain kinase binding protein 1 -0.0197043
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0196717
TFPI2 tissue factor pathway inhibitor 2 -0.0195584
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0193836
BIRC3 baculoviral IAP repeat containing 3 -0.0193428