Folic acid_SHP-77 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Folic acid perturbation in SHP-77 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Folic acid_SHP-77 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE10A phosphodiesterase 10A 0.156191
NALF1 NALCN channel auxiliary factor 1 0.0691152
NRG1 neuregulin 1 0.049164
DOCK5 dedicator of cytokinesis 5 0.0478339
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0395686
SNTG1 syntrophin, gamma 1 0.0395133
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0362829
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0355929
SMOC1 SPARC related modular calcium binding 1 0.0349163
RIMS2 regulating synaptic membrane exocytosis 2 0.034162
TENT5A terminal nucleotidyltransferase 5A 0.0333497
PCBP3 poly(rC) binding protein 3 0.0330765
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0312947
PELI2 pellino E3 ubiquitin protein ligase family member 2 0.0308653
SMYD3 SET and MYND domain containing 3 0.0308417
RPTOR regulatory associated protein of MTOR, complex 1 0.0301225
RPH3AL rabphilin 3A-like (without C2 domains) 0.0300744
LSAMP limbic system-associated membrane protein 0.0300189
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 0.029713
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0271686
NBEA neurobeachin 0.0270286
VGF VGF nerve growth factor inducible 0.0264137
ZBTB20 zinc finger and BTB domain containing 20 0.0260417
AUTS2 autism susceptibility candidate 2 0.0244096
KIF26B kinesin family member 26B 0.0241217
KCTD8 potassium channel tetramerization domain containing 8 0.0237377
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0232203
EFNA5 ephrin-A5 0.0231728
ST18 suppression of tumorigenicity 18, zinc finger 0.023117
COL22A1 collagen, type XXII, alpha 1 0.0226183
AOPEP aminopeptidase O (putative) 0.0213937
SDK1 sidekick cell adhesion molecule 1 0.020809
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0207997
PDE4D phosphodiesterase 4D, cAMP-specific 0.0206037
ZC3H12B zinc finger CCCH-type containing 12B 0.0197596
DGKD diacylglycerol kinase, delta 130kDa 0.0196003
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0194679
TRAPPC9 trafficking protein particle complex 9 0.019053
AVL9 AVL9 homolog (S. cerevisiase) 0.0190274
AGBL4 ATP/GTP binding protein-like 4 0.0189583
RABGAP1L RAB GTPase activating protein 1-like 0.0188948
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0184368
GPC5 glypican 5 0.0184234
LRMDA leucine rich melanocyte differentiation associated 0.0183653
BACE2 beta-site APP-cleaving enzyme 2 0.0180231
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.018014
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0179713
BBS9 Bardet-Biedl syndrome 9 0.01794
FBXL17 F-box and leucine-rich repeat protein 17 0.0178965
UNC79 unc-79 homolog (C. elegans) 0.0171562
SCFD2 sec1 family domain containing 2 0.0170435
SNAP25 synaptosomal-associated protein, 25kDa 0.0167354
DIDO1 death inducer-obliterator 1 0.0166103
ASIC2 acid sensing (proton gated) ion channel 2 0.0165518
ESRRG estrogen-related receptor gamma 0.0164025
MYH9 myosin, heavy chain 9, non-muscle 0.0163037
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0162361
CAMTA1 calmodulin binding transcription activator 1 0.0159601
ARHGAP26 Rho GTPase activating protein 26 0.0157009
FAF1 Fas (TNFRSF6) associated factor 1 0.0155754
KCNB2 potassium channel, voltage gated Shab related subfamily B, member 2 0.0154535
WDFY3 WD repeat and FYVE domain containing 3 0.0154049
FOCAD focadhesin 0.0151604
TBC1D22A TBC1 domain family, member 22A 0.0151326
RORA RAR-related orphan receptor A 0.0151263
SNX13 sorting nexin 13 0.0151184
GPC6 glypican 6 0.0147405
DST dystonin 0.014734
CTBP2 C-terminal binding protein 2 0.0145831
UBAC2 UBA domain containing 2 0.0145606
DPYSL3 dihydropyrimidinase-like 3 0.0143667
GPAT4 glycerol-3-phosphate acyltransferase 4 0.0142175
ERCC6L2 excision repair cross-complementation group 6-like 2 0.014134
CEP95 centrosomal protein 95kDa 0.0140883
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0140732
PAEP progestagen-associated endometrial protein 0.0140573
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0139246
MPRIP myosin phosphatase Rho interacting protein 0.0139057
VWA8 von Willebrand factor A domain containing 8 0.0138513
STXBP5L syntaxin binding protein 5-like 0.0138295
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0138206
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 0.0138159
RIMBP2 RIMS binding protein 2 0.0137138
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.0136422
UNC80 unc-80 homolog (C. elegans) 0.0135974
ANKRD36C ankyrin repeat domain 36C 0.0135023
WDR70 WD repeat domain 70 0.0134809
ARHGAP9 Rho GTPase activating protein 9 0.0134137
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0133524
FNIP1 folliculin interacting protein 1 0.0132134
ITSN1 intersectin 1 (SH3 domain protein) 0.0131694
ZCCHC7 zinc finger, CCHC domain containing 7 0.0131126
TMEM255B transmembrane protein 255B 0.013008
KLHL29 kelch-like family member 29 0.0128405
GRB10 growth factor receptor-bound protein 10 0.0128082
GSE1 Gse1 coiled-coil protein 0.0127927
FAM120B family with sequence similarity 120B 0.0127772
PRKD1 protein kinase D1 0.0127218
GPRIN3 GPRIN family member 3 0.0126243
SETBP1 SET binding protein 1 0.0126061

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.24534
PTMA prothymosin, alpha -0.16493
CALCA calcitonin-related polypeptide alpha -0.133748
TENM1 teneurin transmembrane protein 1 -0.113514
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.106076
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0976659
CENPF centromere protein F, 350/400kDa -0.086206
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0814142
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0805623
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0755368
FTL ferritin, light polypeptide -0.0726953
RPS6 ribosomal protein S6 -0.0628132
ENO1 enolase 1, (alpha) -0.0573035
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0556454
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0511254
ACTG1 actin gamma 1 -0.0495571
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0483917
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0483836
RPS21 ribosomal protein S21 -0.0470902
MAP1B microtubule-associated protein 1B -0.0467478
RPS8 ribosomal protein S8 -0.0456331
FAM162A family with sequence similarity 162, member A -0.0448604
IFI6 interferon, alpha-inducible protein 6 -0.0430568
CPE carboxypeptidase E -0.0426123
EGR1 early growth response 1 -0.0423705
NAMPT nicotinamide phosphoribosyltransferase -0.0422265
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0419641
PDIA3 protein disulfide isomerase family A, member 3 -0.0413093
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0406006
ATP5F1E ATP synthase F1 subunit epsilon -0.0401953
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0394569
PDIA6 protein disulfide isomerase family A, member 6 -0.0390861
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0388121
PEG10 paternally expressed 10 -0.03877
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0387552
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0378398
DSTN destrin (actin depolymerizing factor) -0.0375746
RTN4 reticulon 4 -0.0366876
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2 -0.0365813
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0363944
CADM1 cell adhesion molecule 1 -0.03632
ZNF292 zinc finger protein 292 -0.0362995
RPL8 ribosomal protein L8 -0.0360025
RPL23 ribosomal protein L23 -0.0357491
LDHA lactate dehydrogenase A -0.0354875
IGFBP2 insulin-like growth factor binding protein 2, 36kDa -0.0353222
KTN1 kinectin 1 (kinesin receptor) -0.0349072
SERBP1 SERPINE1 mRNA binding protein 1 -0.0348035
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0344708
S100A9 S100 calcium binding protein A9 -0.0340154
SCG2 secretogranin II -0.0339216
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0328869
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0326265
RAD21 RAD21 homolog (S. pombe) -0.0325688
NCKAP5 NCK-associated protein 5 -0.0323567
SINHCAF SIN3-HDAC complex associated factor -0.03214
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0320447
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0319477
EIF5B eukaryotic translation initiation factor 5B -0.03183
SEPTIN7 septin 7 -0.0315564
SMC4 structural maintenance of chromosomes 4 -0.0314594
TPT1 tumor protein, translationally-controlled 1 -0.0312608
PKM pyruvate kinase, muscle -0.0305353
RPS19 ribosomal protein S19 -0.030392
ISG15 ISG15 ubiquitin-like modifier -0.029922
GPHN gephyrin -0.0297254
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0295558
NAP1L1 nucleosome assembly protein 1-like 1 -0.0292098
POTEF POTE ankyrin domain family, member F -0.0290649
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.029043
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0289234
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.028753
B2M beta-2-microglobulin -0.0285486
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0280721
RPS27A ribosomal protein S27a -0.0279806
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.027914
RPL11 ribosomal protein L11 -0.0277349
STMN1 stathmin 1 -0.0276802
TUBA1B tubulin, alpha 1b -0.0266751
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0266702
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0266253
SASH1 SAM and SH3 domain containing 1 -0.0266144
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0261153
PCSK1 proprotein convertase subtilisin/kexin type 1 -0.0259555
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0257953
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0257525
PRRC2C proline-rich coiled-coil 2C -0.0257406
RPL31 ribosomal protein L31 -0.0255043
RPS3 ribosomal protein S3 -0.0253826
RPS25 ribosomal protein S25 -0.0252584
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E -0.025177
RPLP0 ribosomal protein, large, P0 -0.0249323
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.024871
CHGB chromogranin B -0.0246429
RPL7 ribosomal protein L7 -0.0245776
ECT2 epithelial cell transforming 2 -0.0245195
NUP58 nucleoporin 58 -0.0245018
CCDC88A coiled-coil domain containing 88A -0.0244431
PFN1 profilin 1 -0.0243553
CHGA chromogranin A -0.0243347