Fostamatinib (disodium hexahydrate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fostamatinib (disodium hexahydrate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fostamatinib (disodium hexahydrate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.031588
SREBF2 sterol regulatory element binding transcription factor 2 0.0288693
ESYT2 extended synaptotagmin-like protein 2 0.027176
FAM13A family with sequence similarity 13, member A 0.0266237
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0256169
FNDC3B fibronectin type III domain containing 3B 0.025375
SOX10 SRY (sex determining region Y)-box 10 0.0250343
KMT2E lysine (K)-specific methyltransferase 2E 0.0250192
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0242309
HPCAL1 hippocalcin-like 1 0.0242052
NGLY1 N-glycanase 1 0.023869
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0226572
NBPF15 neuroblastoma breakpoint family, member 15 0.0223911
BRWD3 bromodomain and WD repeat domain containing 3 0.0223488
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0222857
GPR137B G protein-coupled receptor 137B 0.0221525
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0213702
HELZ helicase with zinc finger 0.0212255
LINGO2 leucine rich repeat and Ig domain containing 2 0.0211847
H1-4 H1.4 linker histone, cluster member 0.0202154
SETD5 SET domain containing 5 0.019717
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0190484
MSI2 musashi RNA-binding protein 2 0.0185111
IGFBP3 insulin-like growth factor binding protein 3 0.0184854
FOSL1 FOS-like antigen 1 0.0177622
CTTN cortactin 0.0175192
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0163651
UBA6 ubiquitin-like modifier activating enzyme 6 0.0163257
USP3 ubiquitin specific peptidase 3 0.0158631
CCNL1 cyclin L1 0.0158538
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0157697
PLAUR plasminogen activator, urokinase receptor 0.01488
GARS1 glycyl-tRNA synthetase 1 0.0147169
DOT1L DOT1-like histone H3K79 methyltransferase 0.0145165
POM121 POM121 transmembrane nucleoporin 0.0144594
RB1CC1 RB1-inducible coiled-coil 1 0.0143894
CLEC2D C-type lectin domain family 2, member D 0.0143883
INPP5F inositol polyphosphate-5-phosphatase F 0.0143294
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 0.0142117
ARL5B ADP-ribosylation factor-like 5B 0.0139678
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0137498
KAZN kazrin, periplakin interacting protein 0.0137346
TPD52 tumor protein D52 0.0136495
ZNF292 zinc finger protein 292 0.0136232
RTN4 reticulon 4 0.0133694
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 0.013335
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0129277
SEC24A SEC24 family member A 0.0129229
ATF4 activating transcription factor 4 0.0128906
RNMT RNA (guanine-7-) methyltransferase 0.0127319
CDK19 cyclin-dependent kinase 19 0.0127116
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0126897
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0125585
FMNL2 formin-like 2 0.0123866
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0123103
HILPDA hypoxia inducible lipid droplet-associated 0.01231
TMEM41B transmembrane protein 41B 0.0123091
KIF5C kinesin family member 5C 0.0122355
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 0.0121663
NBPF8 neuroblastoma breakpoint family, member 8 0.0121415
SKIC3 SKI3 subunit of superkiller complex 0.0121305
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0120397
SRP54 signal recognition particle 54kDa 0.0120184
TMEM39A transmembrane protein 39A 0.0115869
CHD1L chromodomain helicase DNA binding protein 1-like 0.0115724
BHLHE40 basic helix-loop-helix family, member e40 0.0114552
ADAM17 ADAM metallopeptidase domain 17 0.0114317
UBE2B ubiquitin-conjugating enzyme E2B 0.0114216
LNPK lunapark, ER junction formation factor 0.0113578
RNF24 ring finger protein 24 0.0110291
SNU13 small nuclear ribonucleoprotein 13 0.0109715
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0108989
ARHGAP21 Rho GTPase activating protein 21 0.0108694
ZBTB43 zinc finger and BTB domain containing 43 0.0108454
TMED9 transmembrane emp24 protein transport domain containing 9 0.0108084
MXI1 MAX interactor 1, dimerization protein 0.0108059
CAMTA1 calmodulin binding transcription activator 1 0.0108056
UGCG UDP-glucose ceramide glucosyltransferase 0.0107606
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0106162
NPEPPS aminopeptidase puromycin sensitive 0.0105226
C1ORF52 chromosome 1 open reading frame 52 0.0104635
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0103902
SBF2 SET binding factor 2 0.0103667
FBXL2 F-box and leucine-rich repeat protein 2 0.0103418
BCAP31 B-cell receptor-associated protein 31 0.0101552
THOC2 THO complex 2 0.0101542
ATXN3 ataxin 3 0.0101434
KIAA1958 KIAA1958 0.0101023
EIF2A eukaryotic translation initiation factor 2A, 65kDa 0.0100851
NDRG1 N-myc downstream regulated 1 0.0100534
MXRA7 matrix-remodelling associated 7 0.00996461
MSN moesin 0.00995685
TRAM1 translocation associated membrane protein 1 0.00993831
CABIN1 calcineurin binding protein 1 0.00988646
FBXL4 F-box and leucine-rich repeat protein 4 0.00974762
PTBP3 polypyrimidine tract binding protein 3 0.00973075
IL1RAP interleukin 1 receptor accessory protein 0.00971407
PRR13 proline rich 13 0.00968357
CALD1 caldesmon 1 0.00966246
WASF2 WAS protein family, member 2 0.00959787

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.244699
FMN1 formin 1 -0.186763
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.173166
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.14451
NLGN1 neuroligin 1 -0.134229
UBC ubiquitin C -0.125495
FN1 fibronectin 1 -0.11615
ENO1 enolase 1, (alpha) -0.112106
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0934021
NRG3 neuregulin 3 -0.0917736
LSAMP limbic system-associated membrane protein -0.0895839
PKM pyruvate kinase, muscle -0.0890852
TMSB10 thymosin beta 10 -0.0889936
CCND1 cyclin D1 -0.0818684
LDHA lactate dehydrogenase A -0.0811837
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0776272
LOC112694756 uncharaterized LOC112694756 -0.0768131
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0698114
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0664693
DST dystonin -0.0663263
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0658487
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0637757
EEF2 eukaryotic translation elongation factor 2 -0.061672
RPL23 ribosomal protein L23 -0.0615112
ZBTB20 zinc finger and BTB domain containing 20 -0.0590376
FRMD4A FERM domain containing 4A -0.0590277
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0581067
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0561779
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0555836
RPS27A ribosomal protein S27a -0.0547955
TM4SF1 transmembrane 4 L six family member 1 -0.0524059
SQSTM1 sequestosome 1 -0.0520723
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0508968
CANX calnexin -0.0495281
TXNRD1 thioredoxin reductase 1 -0.0492641
AHNAK AHNAK nucleoprotein -0.049038
PGK1 phosphoglycerate kinase 1 -0.0481478
ANKRD28 ankyrin repeat domain 28 -0.0458103
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0436101
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0435095
HDAC9 histone deacetylase 9 -0.0433066
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0432375
PCBP2 poly(rC) binding protein 2 -0.042502
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0412526
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.041156
RNF213 ring finger protein 213 -0.041043
VDAC1 voltage-dependent anion channel 1 -0.0405511
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0401757
RAD51B RAD51 paralog B -0.0401369
PRRC2C proline-rich coiled-coil 2C -0.0400951
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.039917
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0397636
POTEF POTE ankyrin domain family, member F -0.0391829
COMMD10 COMM domain containing 10 -0.0387623
ICAM1 intercellular adhesion molecule 1 -0.0381132
SP100 SP100 nuclear antigen -0.038111
EMP1 epithelial membrane protein 1 -0.0376318
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0371944
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0367197
NAP1L1 nucleosome assembly protein 1-like 1 -0.0365782
RUNX1 runt-related transcription factor 1 -0.0362843
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0357767
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0353505
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0351616
RASAL2 RAS protein activator like 2 -0.0344537
TNNC1 troponin C type 1 (slow) -0.0331757
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0329316
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0326853
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0326485
ACTN4 actinin, alpha 4 -0.0317052
SET SET nuclear proto-oncogene -0.0315944
PTPRG protein tyrosine phosphatase, receptor type, G -0.0314606
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0312717
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 -0.0312275
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0310738
IPO7 importin 7 -0.0307039
APOD apolipoprotein D -0.0302439
RPS3 ribosomal protein S3 -0.030214
ASPH aspartate beta-hydroxylase -0.0301683
FHIT fragile histidine triad -0.0301252
SEPTIN7 septin 7 -0.0299308
SFPQ splicing factor proline/glutamine-rich -0.0298948
BICD1 bicaudal D homolog 1 (Drosophila) -0.0297877
BPTF bromodomain PHD finger transcription factor -0.0297006
MYH9 myosin, heavy chain 9, non-muscle -0.0291024
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0289923
SPDYA speedy/RINGO cell cycle regulator family member A -0.0289632
IGF1R insulin-like growth factor 1 receptor -0.0286432
LINC02798 long intergenic non-protein coding RNA 2798 -0.0285863
FER fer (fps/fes related) tyrosine kinase -0.0285785
TRIO trio Rho guanine nucleotide exchange factor -0.0285282
HMGB2 high mobility group box 2 -0.0284927
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0281379
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0280072
ERBIN erbb2 interacting protein -0.0278888
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0278081
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0274234
FRMD5 FERM domain containing 5 -0.0273943
IFI16 interferon, gamma-inducible protein 16 -0.027364
CDK13 cyclin-dependent kinase 13 -0.027131