Fumaric acid_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.142652
PODXL podocalyxin-like 0.117435
TNIP1 TNFAIP3 interacting protein 1 0.110789
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.109216
MYH9 myosin, heavy chain 9, non-muscle 0.0947725
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0892617
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0877807
AKAP12 A kinase (PRKA) anchor protein 12 0.0870676
IGFBP3 insulin-like growth factor binding protein 3 0.076016
COL1A2 collagen, type I, alpha 2 0.0678495
FBN1 fibrillin 1 0.0642157
FLNB filamin B, beta 0.0641233
BHLHE40 basic helix-loop-helix family, member e40 0.0634859
SRRM2 serine/arginine repetitive matrix 2 0.0581129
EEF2 eukaryotic translation elongation factor 2 0.0553409
NCOR2 nuclear receptor corepressor 2 0.0530886
SEPTIN9 septin 9 0.0493268
NFE2L1 nuclear factor, erythroid 2-like 1 0.0479264
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0458001
APP amyloid beta (A4) precursor protein 0.0441548
C1D C1D nuclear receptor corepressor 0.0436053
PLAT plasminogen activator, tissue 0.042721
PSD3 pleckstrin and Sec7 domain containing 3 0.0408366
B2M beta-2-microglobulin 0.0405682
NAV1 neuron navigator 1 0.0405592
ATP13A3 ATPase type 13A3 0.0399386
MSN moesin 0.0394768
MT2A metallothionein 2A 0.0389794
HLA-B major histocompatibility complex, class I, B 0.0389396
STEAP3 STEAP family member 3, metalloreductase 0.0385239
PLEC plectin 0.0385216
OPTN optineurin 0.0376627
FTH1 ferritin, heavy polypeptide 1 0.037513
LOXL2 lysyl oxidase-like 2 0.0374711
DBN1 drebrin 1 0.036656
VEGFA vascular endothelial growth factor A 0.0365721
FLNA filamin A, alpha 0.0361782
SLC22A23 solute carrier family 22, member 23 0.0360366
AFDN afadin, adherens junction formation factor 0.0351401
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0347663
NUMA1 nuclear mitotic apparatus protein 1 0.0347662
DPYSL3 dihydropyrimidinase-like 3 0.0347002
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0338877
NONO non-POU domain containing, octamer-binding 0.0338578
GPC6 glypican 6 0.0335287
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0333054
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0329192
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0322446
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0312625
LENG8 leukocyte receptor cluster (LRC) member 8 0.0295092
TRIO trio Rho guanine nucleotide exchange factor 0.0294838
TMSB4X thymosin beta 4, X-linked 0.0293532
STC1 stanniocalcin 1 0.0292643
MINK1 misshapen-like kinase 1 0.0286339
SFTPA2 surfactant protein A2 0.0286208
LOC112694756 uncharaterized LOC112694756 0.0285735
NAV2 neuron navigator 2 0.0280151
PLXNA3 plexin A3 0.0266441
TPM3 tropomyosin 3 0.0265895
HLA-A major histocompatibility complex, class I, A 0.0261737
RPL3 ribosomal protein L3 0.0261015
YEATS2 YEATS domain containing 2 0.0260108
COL7A1 collagen, type VII, alpha 1 0.0257497
CNOT12 CCR4-NOT transcription complex subunit 12 0.0257145
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0254042
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0250229
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0248227
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0243227
IQSEC1 IQ motif and Sec7 domain 1 0.0242524
MIDEAS mitotic deacetylase associated SANT domain protein 0.0241618
HRNR hornerin 0.0241035
SP3 Sp3 transcription factor 0.0241031
TMOD1 tropomodulin 1 0.02406
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0237586
SOD2 superoxide dismutase 2, mitochondrial 0.0235634
ARGLU1 arginine and glutamate rich 1 0.0235571
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0232896
CD59 CD59 molecule, complement regulatory protein 0.0230552
EIF4H eukaryotic translation initiation factor 4H 0.022946
ELL2 elongation factor, RNA polymerase II, 2 0.0229067
ADAM17 ADAM metallopeptidase domain 17 0.0226934
MPRIP myosin phosphatase Rho interacting protein 0.0225444
PFKP phosphofructokinase, platelet 0.0222479
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0218868
GOLGA2 golgin A2 0.0217905
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0217545
DLG1 discs, large homolog 1 (Drosophila) 0.0213169
SETD5 SET domain containing 5 0.0210719
FOSL1 FOS-like antigen 1 0.0207985
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.0199535
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0198669
TTC7A tetratricopeptide repeat domain 7A 0.0198291
CEP250 centrosomal protein 250kDa 0.0198169
COPG1 coatomer protein complex, subunit gamma 1 0.0197852
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0193949
MTSS1 metastasis suppressor 1 0.0193399
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0192793
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.0192726
FNDC3B fibronectin type III domain containing 3B 0.0191553
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.019127

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.343529
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.319726
AHNAK AHNAK nucleoprotein -0.119393
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.106969
VIM vimentin -0.105797
S100A10 S100 calcium binding protein A10 -0.104773
CDH13 cadherin 13 -0.0949394
LOX lysyl oxidase -0.0944297
ABI3BP ABI family, member 3 (NESH) binding protein -0.0938901
CANX calnexin -0.0915516
SAMD9 sterile alpha motif domain containing 9 -0.0851667
FN1 fibronectin 1 -0.0847244
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0822859
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0810125
RIGI RNA sensor RIG-I -0.0798976
MAP1B microtubule-associated protein 1B -0.0791612
CSTB cystatin B (stefin B) -0.0712154
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0680501
CCND1 cyclin D1 -0.0667083
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0603753
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0588681
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0538105
SP100 SP100 nuclear antigen -0.0515589
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0501577
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0489944
FSTL1 follistatin-like 1 -0.0457387
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0426918
ASPH aspartate beta-hydroxylase -0.042611
IFI16 interferon, gamma-inducible protein 16 -0.0402591
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0397726
THBS2 thrombospondin 2 -0.039352
TPT1 tumor protein, translationally-controlled 1 -0.0391863
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0388405
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0381995
SLC38A1 solute carrier family 38, member 1 -0.0379064
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0377475
SLC39A11 solute carrier family 39, member 11 -0.0373681
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0371601
PRSS23 protease, serine, 23 -0.0369988
UBC ubiquitin C -0.0365148
IL7R interleukin 7 receptor -0.0354505
ALCAM activated leukocyte cell adhesion molecule -0.0351735
DCLK2 doublecortin-like kinase 2 -0.0351631
IARS1 isoleucyl-tRNA synthetase 1 -0.0350205
SORBS2 sorbin and SH3 domain containing 2 -0.0347801
ANXA2 annexin A2 -0.034441
COL3A1 collagen, type III, alpha 1 -0.0344189
FNDC3A fibronectin type III domain containing 3A -0.0343292
LMNA lamin A/C -0.034211
SEPTIN7 septin 7 -0.0338067
MBNL1 muscleblind-like splicing regulator 1 -0.0335669
IFIH1 interferon induced with helicase C domain 1 -0.0324211
RAB1A RAB1A, member RAS oncogene family -0.0323003
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.031832
PDIA3 protein disulfide isomerase family A, member 3 -0.0317321
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0316479
LRRC17 leucine rich repeat containing 17 -0.031151
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0307681
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0304423
SH3KBP1 SH3-domain kinase binding protein 1 -0.0302774
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0300891
RASAL2 RAS protein activator like 2 -0.0296786
EFNA5 ephrin-A5 -0.0296753
CD99 CD99 molecule -0.0291105
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0289745
RAB7A RAB7A, member RAS oncogene family -0.0288527
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0287316
FLT1 fms-related tyrosine kinase 1 -0.0286441
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0278366
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0276765
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0275483
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0273393
EGFR epidermal growth factor receptor -0.0271374
CDK13 cyclin-dependent kinase 13 -0.0268783
CYTH3 cytohesin 3 -0.0266943
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.026678
TAOK1 TAO kinase 1 -0.0265298
PCDH7 protocadherin 7 -0.0260396
MACF1 microtubule-actin crosslinking factor 1 -0.0257096
WSB1 WD repeat and SOCS box containing 1 -0.0256385
CUX1 cut-like homeobox 1 -0.0254468
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0254112
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.02521
SQSTM1 sequestosome 1 -0.0251982
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0249987
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0247795
RPS15 ribosomal protein S15 -0.0246374
SEC31A SEC31 homolog A (S. cerevisiae) -0.024526
MAP4 microtubule-associated protein 4 -0.0245253
HSPB1 heat shock 27kDa protein 1 -0.024477
NDRG1 N-myc downstream regulated 1 -0.0241708
SAMD9L sterile alpha motif domain containing 9-like -0.0239961
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0239271
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.023797
OASL 2'-5'-oligoadenylate synthetase-like -0.0236704
EXT1 exostosin glycosyltransferase 1 -0.0235671
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.023082
FMN2 formin 2 -0.023013
RRBP1 ribosome binding protein 1 -0.0228177
JMJD1C jumonji domain containing 1C -0.0226183