Fumaric acid_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.143875
PTMA prothymosin, alpha 0.100714
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0803661
NLGN1 neuroligin 1 0.0584816
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0565182
CMIP c-Maf inducing protein 0.0552519
EIF4B eukaryotic translation initiation factor 4B 0.050544
CALR calreticulin 0.0504293
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0493906
RPL23 ribosomal protein L23 0.0485586
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0440486
TPT1 tumor protein, translationally-controlled 1 0.0435865
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0421473
SRRM2 serine/arginine repetitive matrix 2 0.0418543
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0409781
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0408492
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0402254
FUS FUS RNA binding protein 0.0379727
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0368257
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 0.0366207
HLA-A major histocompatibility complex, class I, A 0.0350422
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0349835
EEF1G eukaryotic translation elongation factor 1 gamma 0.0344363
TGM2 transglutaminase 2 0.0340667
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0335682
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0335129
FLNA filamin A, alpha 0.0332879
PLEC plectin 0.0332803
PGK1 phosphoglycerate kinase 1 0.033176
TRIO trio Rho guanine nucleotide exchange factor 0.0322059
ANKRD11 ankyrin repeat domain 11 0.0320484
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0316208
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0315606
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) 0.0301842
CELF2 CUGBP, Elav-like family member 2 0.0297178
PTPRF protein tyrosine phosphatase, receptor type, F 0.0297037
DST dystonin 0.029628
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0291223
RPS3 ribosomal protein S3 0.0290261
HMGA2 high mobility group AT-hook 2 0.0289332
NHSL1 NHS-like 1 0.0287965
EIF4H eukaryotic translation initiation factor 4H 0.0282011
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.027935
RPL13A ribosomal protein L13a 0.0276021
WDR43 WD repeat domain 43 0.0275771
ASPH aspartate beta-hydroxylase 0.027541
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0272466
SRSF1 serine/arginine-rich splicing factor 1 0.0271848
GASK1B golgi associated kinase 1B 0.0271775
LOC112694756 uncharaterized LOC112694756 0.027047
APP amyloid beta (A4) precursor protein 0.0268201
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0267018
ACTN4 actinin, alpha 4 0.0263987
EIF4A1 eukaryotic translation initiation factor 4A1 0.0263031
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0257309
FTH1 ferritin, heavy polypeptide 1 0.0256489
KPNB1 karyopherin (importin) beta 1 0.0253915
TSPAN9 tetraspanin 9 0.025391
TM4SF1 transmembrane 4 L six family member 1 0.0248634
PDCD6 programmed cell death 6 0.0247261
LDHA lactate dehydrogenase A 0.0246156
TENM3 teneurin transmembrane protein 3 0.0241823
PRRC2A proline-rich coiled-coil 2A 0.0240923
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0240173
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.0239912
NUMA1 nuclear mitotic apparatus protein 1 0.0237989
PGGHG protein-glucosylgalactosylhydroxylysine glucosidase 0.0236639
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0236523
GANAB glucosidase, alpha; neutral AB 0.0236391
RPL3 ribosomal protein L3 0.0235236
AXIN2 axin 2 0.0229745
MTCL1 microtubule crosslinking factor 1 0.0229277
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0229176
DENND5A DENN/MADD domain containing 5A 0.0224023
MYH9 myosin, heavy chain 9, non-muscle 0.022401
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0223695
KRT8 keratin 8, type II 0.0223674
MSI2 musashi RNA-binding protein 2 0.022348
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0222593
TCOF1 Treacher Collins-Franceschetti syndrome 1 0.0221875
ANXA2 annexin A2 0.0221307
NFE2L1 nuclear factor, erythroid 2-like 1 0.0217818
NCOR2 nuclear receptor corepressor 2 0.0217723
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0216483
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 0.0216267
RPL37 ribosomal protein L37 0.0215055
ACTG1 actin gamma 1 0.0213381
NONO non-POU domain containing, octamer-binding 0.0211831
NSD2 nuclear receptor binding SET domain protein 2 0.0210997
HDAC4 histone deacetylase 4 0.0210811
EGR1 early growth response 1 0.0209623
ECT2 epithelial cell transforming 2 0.020941
PKM pyruvate kinase, muscle 0.0209051
IFIH1 interferon induced with helicase C domain 1 0.0206752
INTS6 integrator complex subunit 6 0.0206697
FGFR1 fibroblast growth factor receptor 1 0.0206333
PER1 period circadian clock 1 0.0203672
AKAP12 A kinase (PRKA) anchor protein 12 0.0201941
RPL35A ribosomal protein L35a 0.0200357
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0199878

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.252303
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.139999
MMP12 matrix metallopeptidase 12 -0.123509
RPS2 ribosomal protein S2 -0.106019
AREG amphiregulin -0.102692
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0817472
JMJD1C jumonji domain containing 1C -0.0769188
NIPBL Nipped-B homolog (Drosophila) -0.0731928
TXNRD1 thioredoxin reductase 1 -0.0705246
SLC38A2 solute carrier family 38, member 2 -0.067883
VMP1 vacuole membrane protein 1 -0.064442
ANKRD12 ankyrin repeat domain 12 -0.0605383
CLTC clathrin, heavy chain (Hc) -0.0601494
PDE4D phosphodiesterase 4D, cAMP-specific -0.0583399
FTL ferritin, light polypeptide -0.0575989
ZBTB20 zinc finger and BTB domain containing 20 -0.0516092
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0515797
USP34 ubiquitin specific peptidase 34 -0.0502222
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0489051
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0457456
PRKCI protein kinase C, iota -0.0449433
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0442467
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0431066
ZNF804A zinc finger protein 804A -0.0422451
RTN4 reticulon 4 -0.0419625
DPYD dihydropyrimidine dehydrogenase -0.0416235
IL6ST interleukin 6 signal transducer -0.0414969
TMEM41B transmembrane protein 41B -0.0402805
EXOC6B exocyst complex component 6B -0.040237
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0397499
FBXO11 F-box protein 11 -0.0393752
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0385717
PREPL prolyl endopeptidase-like -0.0380403
TAS2R14 taste receptor, type 2, member 14 -0.0371929
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0370805
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0360952
TASOR2 transcription activation suppressor family member 2 -0.0359442
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0356052
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0347494
ANKRD17 ankyrin repeat domain 17 -0.0346475
MAP1B microtubule-associated protein 1B -0.0345428
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0344945
GOLGB1 golgin B1 -0.0344294
RAB10 RAB10, member RAS oncogene family -0.0333109
RAB1A RAB1A, member RAS oncogene family -0.032184
ZNF292 zinc finger protein 292 -0.0319883
BIRC2 baculoviral IAP repeat containing 2 -0.0319562
CAMKMT calmodulin-lysine N-methyltransferase -0.0319166
NKTR natural killer cell triggering receptor -0.0316268
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0314246
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0314218
KIF5B kinesin family member 5B -0.0312776
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0307428
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0307398
IPO7 importin 7 -0.0306936
ARL15 ADP-ribosylation factor-like 15 -0.030565
RPS6 ribosomal protein S6 -0.0304641
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0303391
WNK1 WNK lysine deficient protein kinase 1 -0.0302927
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0284452
RO60 Ro60, Y RNA binding protein -0.0283773
CPOX coproporphyrinogen oxidase -0.0281336
MBNL1 muscleblind-like splicing regulator 1 -0.0278558
ATP5F1B ATP synthase F1 subunit beta -0.0276424
RPL12 ribosomal protein L12 -0.0273798
KTN1 kinectin 1 (kinesin receptor) -0.027323
EPHA6 EPH receptor A6 -0.0272825
KLHL24 kelch-like family member 24 -0.0272788
U2SURP U2 snRNP-associated SURP domain containing -0.0270136
PCM1 pericentriolar material 1 -0.0270103
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0269118
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0268
BCAS3 breast carcinoma amplified sequence 3 -0.0265903
EDN1 endothelin 1 -0.026532
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0263667
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0260637
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0259956
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0259394
WASF2 WAS protein family, member 2 -0.0255297
XPO1 exportin 1 -0.0255236
GOLGA4 golgin A4 -0.0254663
CXADR coxsackie virus and adenovirus receptor -0.025394
H1-0 H1.0 linker histone -0.02509
CCDC88A coiled-coil domain containing 88A -0.0250525
SETD5 SET domain containing 5 -0.0247638
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 -0.0245958
MGAT4C MGAT4 family, member C -0.0245919
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0245876
AKAP9 A kinase (PRKA) anchor protein 9 -0.0243659
UBXN4 UBX domain protein 4 -0.0241692
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0240257
RSRC1 arginine/serine-rich coiled-coil 1 -0.0238646
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0238306
PAPOLA poly(A) polymerase alpha -0.0232745
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0232371
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.023125
CSNK1A1 casein kinase 1, alpha 1 -0.0230844
NIPSNAP2 nipsnap homolog 2 -0.0229715
SEC62 SEC62 homolog (S. cerevisiae) -0.0229045
CNRIP1 cannabinoid receptor interacting protein 1 -0.0228823