Fumaric acid_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ASPH aspartate beta-hydroxylase 0.187423
MYH9 myosin, heavy chain 9, non-muscle 0.178899
CSF1 colony stimulating factor 1 (macrophage) 0.103072
CCL2 chemokine (C-C motif) ligand 2 0.0874784
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0803904
APOL1 apolipoprotein L, 1 0.079089
APP amyloid beta (A4) precursor protein 0.0785425
TXNRD1 thioredoxin reductase 1 0.0677183
EEF2 eukaryotic translation elongation factor 2 0.064335
HLA-B major histocompatibility complex, class I, B 0.0632181
SMAD3 SMAD family member 3 0.0621675
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0610688
NRP2 neuropilin 2 0.0599167
DENND2B DENN domain containing 2B 0.0594931
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0567631
TNIP1 TNFAIP3 interacting protein 1 0.0556091
CP ceruloplasmin (ferroxidase) 0.0544755
BHLHE40 basic helix-loop-helix family, member e40 0.0515783
RRBP1 ribosome binding protein 1 0.0473545
RPL3 ribosomal protein L3 0.0445191
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0441762
G0S2 G0/G1 switch 2 0.0433402
DDIT4 DNA-damage-inducible transcript 4 0.0432771
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0426282
NAMPT nicotinamide phosphoribosyltransferase 0.0416311
NONO non-POU domain containing, octamer-binding 0.04145
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0408344
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0408342
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0408128
EIF4H eukaryotic translation initiation factor 4H 0.040585
RBM39 RNA binding motif protein 39 0.0402346
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0397611
RPL4 ribosomal protein L4 0.0391441
CALU calumenin 0.0389708
CA12 carbonic anhydrase XII 0.0388636
B2M beta-2-microglobulin 0.0383196
PTMA prothymosin, alpha 0.038276
LOC112694756 uncharaterized LOC112694756 0.0381217
MSN moesin 0.0379643
SET SET nuclear proto-oncogene 0.0365957
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0364721
TPM3 tropomyosin 3 0.0364468
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0361581
CALR calreticulin 0.035789
HLA-A major histocompatibility complex, class I, A 0.0343484
ANLN anillin, actin binding protein 0.0339914
GLS2 glutaminase 2 (liver, mitochondrial) 0.0334341
PLEC plectin 0.0321963
CENPF centromere protein F, 350/400kDa 0.0318209
MARCHF6 membrane associated ring-CH-type finger 6 0.0317548
RAD21 RAD21 homolog (S. pombe) 0.0311862
SRRM2 serine/arginine repetitive matrix 2 0.0310542
NAP1L1 nucleosome assembly protein 1-like 1 0.031037
P3H2 prolyl 3-hydroxylase 2 0.0309749
FLNA filamin A, alpha 0.0309659
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0309287
CAPRIN1 cell cycle associated protein 1 0.0304899
ANKRD11 ankyrin repeat domain 11 0.0304839
UGCG UDP-glucose ceramide glucosyltransferase 0.0302571
NFIB nuclear factor I/B 0.0302354
ACTN4 actinin, alpha 4 0.0302326
PBX1 pre-B-cell leukemia homeobox 1 0.0302072
IRS2 insulin receptor substrate 2 0.0301412
RNF213 ring finger protein 213 0.03011
ICAM1 intercellular adhesion molecule 1 0.0300006
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0299674
RRM2 ribonucleotide reductase M2 0.0299204
TNRC6A trinucleotide repeat containing 6A 0.0293402
PTGR1 prostaglandin reductase 1 0.029225
ANKRD33B ankyrin repeat domain 33B 0.0290382
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.028708
MT2A metallothionein 2A 0.0283245
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0281731
FAT1 FAT atypical cadherin 1 0.0281695
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0280148
ZMYND8 zinc finger, MYND-type containing 8 0.0277782
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0276585
APOL2 apolipoprotein L, 2 0.0273813
LMNA lamin A/C 0.0273659
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0272636
DAPK1 death-associated protein kinase 1 0.027239
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0271175
ARGLU1 arginine and glutamate rich 1 0.0271094
TRIM56 tripartite motif containing 56 0.0269743
TRIO trio Rho guanine nucleotide exchange factor 0.0269224
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.026811
ZFP36L1 ZFP36 ring finger protein-like 1 0.026526
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.026233
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0260251
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0260028
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0259165
GPR107 G protein-coupled receptor 107 0.0256725
HPCAL1 hippocalcin-like 1 0.0254602
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0253952
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0250717
JUN jun proto-oncogene 0.0250712
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0249061
SDC4 syndecan 4 0.0245087
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 0.0244872
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0244616

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.182978
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.168892
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0971358
VIM vimentin -0.091586
EXT1 exostosin glycosyltransferase 1 -0.085871
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0797642
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0780325
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0779116
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0683557
INTS6 integrator complex subunit 6 -0.0615238
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0563971
TFPI2 tissue factor pathway inhibitor 2 -0.0563141
FTL ferritin, light polypeptide -0.0542341
GPC6 glypican 6 -0.0541779
TPT1 tumor protein, translationally-controlled 1 -0.0507894
GOLGB1 golgin B1 -0.0496835
AKAP9 A kinase (PRKA) anchor protein 9 -0.0489508
SEC31A SEC31 homolog A (S. cerevisiae) -0.0488779
PDLIM5 PDZ and LIM domain 5 -0.0479488
PDIA3 protein disulfide isomerase family A, member 3 -0.0469885
KYNU kynureninase -0.046518
IGFBP3 insulin-like growth factor binding protein 3 -0.0458986
VCL vinculin -0.0458291
COG5 component of oligomeric golgi complex 5 -0.0447991
PALLD palladin, cytoskeletal associated protein -0.0446166
RAI14 retinoic acid induced 14 -0.0440973
IARS1 isoleucyl-tRNA synthetase 1 -0.0429997
SPDYA speedy/RINGO cell cycle regulator family member A -0.0425762
NUP98 nucleoporin 98kDa -0.0420428
BLZF1 basic leucine zipper nuclear factor 1 -0.0405666
EGFR epidermal growth factor receptor -0.0404321
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0399519
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0392117
COG6 component of oligomeric golgi complex 6 -0.038546
UBC ubiquitin C -0.0383485
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0377926
FRMD4A FERM domain containing 4A -0.0368788
PLIN2 perilipin 2 -0.0362932
GDI2 GDP dissociation inhibitor 2 -0.0362366
CREB5 cAMP responsive element binding protein 5 -0.0358865
SOD2 superoxide dismutase 2, mitochondrial -0.0356314
SP100 SP100 nuclear antigen -0.0351941
RAB1A RAB1A, member RAS oncogene family -0.034146
CANX calnexin -0.0334394
CTSD cathepsin D -0.0332526
NDRG1 N-myc downstream regulated 1 -0.0331568
SETX senataxin -0.032675
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.03241
AHNAK AHNAK nucleoprotein -0.0321443
UBAP2 ubiquitin associated protein 2 -0.0321138
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0316378
MON2 MON2 homolog (S. cerevisiae) -0.0314921
PDE4D phosphodiesterase 4D, cAMP-specific -0.0312613
SLC31A1 solute carrier family 31 (copper transporter), member 1 -0.0309518
SEC24D SEC24 family member D -0.0308243
COPA coatomer protein complex, subunit alpha -0.0307629
SUCO SUN domain containing ossification factor -0.0307465
RAB7A RAB7A, member RAS oncogene family -0.0304927
PNPLA8 patatin-like phospholipase domain containing 8 -0.0304526
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0301451
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0300932
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0294524
SPAG9 sperm associated antigen 9 -0.0292491
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0291963
TMEM165 transmembrane protein 165 -0.0290751
ALCAM activated leukocyte cell adhesion molecule -0.0290171
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0287738
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0286753
FNDC3B fibronectin type III domain containing 3B -0.028654
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0284943
ATF6 activating transcription factor 6 -0.0282781
TMEM263 transmembrane protein 263 -0.0282165
HM13 histocompatibility (minor) 13 -0.0281702
HMGA1 high mobility group AT-hook 1 -0.0281701
RPS8 ribosomal protein S8 -0.0281038
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0280349
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0279768
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0278866
ELL2 elongation factor, RNA polymerase II, 2 -0.0277687
TTC3 tetratricopeptide repeat domain 3 -0.0276287
MYADM myeloid-associated differentiation marker -0.0275882
TRAM1 translocation associated membrane protein 1 -0.0274154
EPAS1 endothelial PAS domain protein 1 -0.0268509
CADM1 cell adhesion molecule 1 -0.02679
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0265571
DGKI diacylglycerol kinase, iota -0.0264361
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0261954
MSR1 macrophage scavenger receptor 1 -0.0260907
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0259347
MRPS6 mitochondrial ribosomal protein S6 -0.0258119
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0257228
TASOR2 transcription activation suppressor family member 2 -0.0255872
MYO1E myosin IE -0.0253723
TPST1 tyrosylprotein sulfotransferase 1 -0.0249872
COPB1 coatomer protein complex, subunit beta 1 -0.0249563
SEC24A SEC24 family member A -0.0248239
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A -0.0247045
SCFD2 sec1 family domain containing 2 -0.0246302
HSPB1 heat shock 27kDa protein 1 -0.0244719
RND3 Rho family GTPase 3 -0.0242659