Fumaric acid_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.186062
TNIP1 TNFAIP3 interacting protein 1 0.159156
EEF2 eukaryotic translation elongation factor 2 0.139598
MYH9 myosin, heavy chain 9, non-muscle 0.138013
SMAD3 SMAD family member 3 0.125369
TMSB10 thymosin beta 10 0.115976
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0980261
TRIO trio Rho guanine nucleotide exchange factor 0.0962597
PLEC plectin 0.0925915
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0882266
ANKRD11 ankyrin repeat domain 11 0.0871214
MSN moesin 0.0868333
NAV2 neuron navigator 2 0.0809012
MCL1 myeloid cell leukemia 1 0.0766988
NONO non-POU domain containing, octamer-binding 0.0763412
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0720353
RPL23 ribosomal protein L23 0.0717053
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.071436
RPL3 ribosomal protein L3 0.069164
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0671999
ACTG1 actin gamma 1 0.0636725
FLNA filamin A, alpha 0.0610275
KRT8 keratin 8, type II 0.060549
SAMD4A sterile alpha motif domain containing 4A 0.0602427
ARHGAP26 Rho GTPase activating protein 26 0.060025
MT2A metallothionein 2A 0.0594833
SHB Src homology 2 domain containing adaptor protein B 0.0564205
SRRM2 serine/arginine repetitive matrix 2 0.0563936
ASPH aspartate beta-hydroxylase 0.0560178
EEF1G eukaryotic translation elongation factor 1 gamma 0.0560162
MT1X metallothionein 1X 0.0552794
KRT18 keratin 18, type I 0.0534263
LOC112694756 uncharaterized LOC112694756 0.0520008
POTEF POTE ankyrin domain family, member F 0.0496832
PKM pyruvate kinase, muscle 0.0491654
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0484653
PCBP2 poly(rC) binding protein 2 0.0484642
PFN1 profilin 1 0.048156
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0462101
KIRREL3 kin of IRRE like 3 (Drosophila) 0.045286
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0445953
KRT7 keratin 7, type II 0.0438317
RPS19 ribosomal protein S19 0.0427409
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0424918
CTBP2 C-terminal binding protein 2 0.0419451
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.041631
ACTN4 actinin, alpha 4 0.0406172
PTK2 protein tyrosine kinase 2 0.0405157
TMSB4X thymosin beta 4, X-linked 0.0402625
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0396088
FLNB filamin B, beta 0.0393857
RPL11 ribosomal protein L11 0.0393538
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0392562
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0387311
MINK1 misshapen-like kinase 1 0.0381691
EGR1 early growth response 1 0.0372336
NUP58 nucleoporin 58 0.0371855
MPRIP myosin phosphatase Rho interacting protein 0.0369402
ECT2 epithelial cell transforming 2 0.0365516
SPAG9 sperm associated antigen 9 0.0358786
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0358565
BCL2L1 BCL2-like 1 0.0349143
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0348537
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0348476
ANXA1 annexin A1 0.0345815
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0345682
SOD2 superoxide dismutase 2, mitochondrial 0.0339862
SEPTIN9 septin 9 0.0335155
TBC1D22A TBC1 domain family, member 22A 0.033194
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0331123
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0328543
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0326863
ADAM17 ADAM metallopeptidase domain 17 0.0326342
GLS2 glutaminase 2 (liver, mitochondrial) 0.0324978
BHLHE40 basic helix-loop-helix family, member e40 0.0324278
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0323989
RLIM ring finger protein, LIM domain interacting 0.0320155
VCL vinculin 0.031909
RPL13A ribosomal protein L13a 0.0316514
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0314433
LMNA lamin A/C 0.0309574
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0308009
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0307938
USP9X ubiquitin specific peptidase 9, X-linked 0.0306544
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0304817
CMIP c-Maf inducing protein 0.030465
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0302416
PICALM phosphatidylinositol binding clathrin assembly protein 0.0299958
MYO10 myosin X 0.0299124
PGK1 phosphoglycerate kinase 1 0.0297296
RPL7 ribosomal protein L7 0.0296855
PMM2 phosphomannomutase 2 0.0295613
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0295008
WDR43 WD repeat domain 43 0.0293099
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0289319
AKAP13 A kinase (PRKA) anchor protein 13 0.0287786
ACTN1 actinin, alpha 1 0.0286552
STEAP3 STEAP family member 3, metalloreductase 0.0286105
CD59 CD59 molecule, complement regulatory protein 0.0286007
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0285674

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.176594
PDE4D phosphodiesterase 4D, cAMP-specific -0.0960307
AKAP12 A kinase (PRKA) anchor protein 12 -0.0725867
EFNA5 ephrin-A5 -0.0642605
VIM vimentin -0.0616388
RAI14 retinoic acid induced 14 -0.0583485
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.057786
CA12 carbonic anhydrase XII -0.0565013
OSMR oncostatin M receptor -0.05604
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0541896
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0532715
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.053265
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.049737
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.049291
IGFBP4 insulin-like growth factor binding protein 4 -0.0464106
BTG1 B-cell translocation gene 1, anti-proliferative -0.0463217
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0452471
NCOA7 nuclear receptor coactivator 7 -0.0429105
RIGI RNA sensor RIG-I -0.0402316
BASP1 brain abundant, membrane attached signal protein 1 -0.0401566
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0336589
ANXA4 annexin A4 -0.0324853
RRBP1 ribosome binding protein 1 -0.031809
RIN2 Ras and Rab interactor 2 -0.0313495
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0303553
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0299831
NAMPT nicotinamide phosphoribosyltransferase -0.0295732
ZMYND8 zinc finger, MYND-type containing 8 -0.0292864
FBXL2 F-box and leucine-rich repeat protein 2 -0.0291865
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.028524
NRP1 neuropilin 1 -0.025465
HIP1 huntingtin interacting protein 1 -0.0252334
MYO9A myosin IXA -0.0250588
IER3 immediate early response 3 -0.025022
PTBP3 polypyrimidine tract binding protein 3 -0.0249837
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0241476
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0240625
ZBTB20 zinc finger and BTB domain containing 20 -0.023969
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0235447
EHBP1 EH domain binding protein 1 -0.022941
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0229115
NT5C2 5'-nucleotidase, cytosolic II -0.0227548
PLSCR1 phospholipid scramblase 1 -0.0227019
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0225483
GCC2 GRIP and coiled-coil domain containing 2 -0.0218043
BMERB1 bMERB domain containing 1 -0.0214547
CD99 CD99 molecule -0.0214148
CANX calnexin -0.021393
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0212916
TAS2R14 taste receptor, type 2, member 14 -0.0208961
GPRIN3 GPRIN family member 3 -0.0207821
NF1 neurofibromin 1 -0.0206044
CP ceruloplasmin (ferroxidase) -0.0205577
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.020491
EGFR epidermal growth factor receptor -0.0203665
DUSP16 dual specificity phosphatase 16 -0.0203475
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0203346
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0202177
ZNF638 zinc finger protein 638 -0.0199523
WSB1 WD repeat and SOCS box containing 1 -0.0198866
NDRG1 N-myc downstream regulated 1 -0.0198224
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0198141
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0196164
CLDN1 claudin 1 -0.0193599
FN1 fibronectin 1 -0.019251
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0190802
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0189091
KDM7A lysine (K)-specific demethylase 7A -0.0188916
BICC1 BicC family RNA binding protein 1 -0.0187852
HLA-E major histocompatibility complex, class I, E -0.0184502
MYO1E myosin IE -0.0184378
LMAN1 lectin, mannose-binding, 1 -0.0183609
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase -0.0183517
TDRD7 tudor domain containing 7 -0.0182754
GPATCH8 G patch domain containing 8 -0.0182633
RPS29 ribosomal protein S29 -0.0180663
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.018021
GOSR1 golgi SNAP receptor complex member 1 -0.0179367
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0179102
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0179097
MAP4 microtubule-associated protein 4 -0.0178488
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0177819
PDE10A phosphodiesterase 10A -0.0176279
EXOC6B exocyst complex component 6B -0.0175604
SCAF11 SR-related CTD-associated factor 11 -0.0173367
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.0173261
RSL1D1 ribosomal L1 domain containing 1 -0.0173133
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0172539
JMJD1C jumonji domain containing 1C -0.0171381
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0168862
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0167828
RPL38 ribosomal protein L38 -0.0167662
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0167024
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0166717
RAB1A RAB1A, member RAS oncogene family -0.016647
RSPO3 R-spondin 3 -0.0165687
KRT81 keratin 81, type II -0.0165386
DNAAF9 dynein axonemal assembly factor 9 -0.016472
MTDH metadherin -0.0163225
GNAS GNAS complex locus -0.0162695