Fumaric acid_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPL23 ribosomal protein L23 0.187643
CEP250 centrosomal protein 250kDa 0.125189
MYH9 myosin, heavy chain 9, non-muscle 0.108275
RPL19 ribosomal protein L19 0.0782472
FTH1 ferritin, heavy polypeptide 1 0.0777873
VEGFA vascular endothelial growth factor A 0.0761042
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 0.0734515
LASP1 LIM and SH3 protein 1 0.0728033
KRT8 keratin 8, type II 0.0723083
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0719019
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0705573
PLEC plectin 0.0656568
EEF2 eukaryotic translation elongation factor 2 0.0628579
SET SET nuclear proto-oncogene 0.0614031
NDRG1 N-myc downstream regulated 1 0.0609403
LOC112694756 uncharaterized LOC112694756 0.0597922
ERBB2 erb-b2 receptor tyrosine kinase 2 0.0582086
TMSB4X thymosin beta 4, X-linked 0.0547273
SRRM2 serine/arginine repetitive matrix 2 0.0540434
ACSS2 acyl-CoA synthetase short-chain family member 2 0.0521204
HSPA8 heat shock 70kDa protein 8 0.0513099
KRT18 keratin 18, type I 0.0489659
ACTG1 actin gamma 1 0.0487891
NCOA3 nuclear receptor coactivator 3 0.0456754
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0410484
PTMA prothymosin, alpha 0.0405809
GRB10 growth factor receptor-bound protein 10 0.0388627
CEMIP cell migration inducing protein, hyaluronan binding 0.0378186
RAB6A RAB6A, member RAS oncogene family 0.0361539
SRCIN1 SRC kinase signaling inhibitor 1 0.0360013
LMNA lamin A/C 0.0351797
PRRC2B proline-rich coiled-coil 2B 0.0351379
RPL3 ribosomal protein L3 0.0339572
NCOR2 nuclear receptor corepressor 2 0.0327713
NONO non-POU domain containing, octamer-binding 0.0326861
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.032202
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0316533
HRNR hornerin 0.0313914
RPS3 ribosomal protein S3 0.031309
NIBAN2 niban apoptosis regulator 2 0.0310611
KIF1A kinesin family member 1A 0.0308581
HLA-C major histocompatibility complex, class I, C 0.0303994
SREBF2 sterol regulatory element binding transcription factor 2 0.0297848
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0295921
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0291489
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0290501
MIDEAS mitotic deacetylase associated SANT domain protein 0.0290389
MLPH melanophilin 0.0290347
PNN pinin, desmosome associated protein 0.0290184
B2M beta-2-microglobulin 0.0281259
EIF4H eukaryotic translation initiation factor 4H 0.0280545
PPP1R9B protein phosphatase 1, regulatory subunit 9B 0.027955
ZMYND8 zinc finger, MYND-type containing 8 0.0274137
BHLHE40 basic helix-loop-helix family, member e40 0.0270361
TPM3 tropomyosin 3 0.0270229
HLA-B major histocompatibility complex, class I, B 0.0269422
INSIG1 insulin induced gene 1 0.0266436
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0261809
CCNY cyclin Y 0.0260791
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0254085
ACIN1 apoptotic chromatin condensation inducer 1 0.0253807
RPL35A ribosomal protein L35a 0.0250573
FLNA filamin A, alpha 0.0246972
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) 0.0244161
AHDC1 AT hook, DNA binding motif, containing 1 0.0241808
MINK1 misshapen-like kinase 1 0.0241498
CNOT12 CCR4-NOT transcription complex subunit 12 0.0241207
GOLGA2 golgin A2 0.0239512
EPPK1 epiplakin 1 0.0236124
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.023437
STIP1 stress-induced phosphoprotein 1 0.02318
TPD52 tumor protein D52 0.0231686
FAM13A family with sequence similarity 13, member A 0.0230974
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0230052
ESYT2 extended synaptotagmin-like protein 2 0.0228131
ACTN1 actinin, alpha 1 0.0227789
BCL9L B-cell CLL/lymphoma 9-like 0.0227113
NFE2L1 nuclear factor, erythroid 2-like 1 0.0227008
DSPP dentin sialophosphoprotein 0.0219496
PFKP phosphofructokinase, platelet 0.0219411
CALR calreticulin 0.0218714
STARD3 StAR-related lipid transfer (START) domain containing 3 0.0217082
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0216696
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0216325
EEF1G eukaryotic translation elongation factor 1 gamma 0.0214814
RSRC2 arginine/serine-rich coiled-coil 2 0.0214053
KRT7 keratin 7, type II 0.0213634
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0213464
BCL3 B-cell CLL/lymphoma 3 0.0212805
ZMIZ1 zinc finger, MIZ-type containing 1 0.0212805
MKRN1 makorin ring finger protein 1 0.0210215
ARGLU1 arginine and glutamate rich 1 0.020789
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0205984
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0204079
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0201567
EEIG1 estrogen-induced osteoclastogenesis regulator 1 0.0197481
TP53INP2 tumor protein p53 inducible nuclear protein 2 0.0196588
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.0196351
CTNND1 catenin (cadherin-associated protein), delta 1 0.0195846
APLP2 amyloid beta (A4) precursor-like protein 2 0.0195372

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.15306
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0980737
CATSPERB catsper channel auxiliary subunit beta -0.0786456
TRPS1 trichorhinophalangeal syndrome I -0.0669289
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0646258
CDK12 cyclin-dependent kinase 12 -0.0646242
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0600124
EXT1 exostosin glycosyltransferase 1 -0.0481872
CCNI cyclin I -0.0469956
RIMS2 regulating synaptic membrane exocytosis 2 -0.0467994
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0449111
ZNF217 zinc finger protein 217 -0.0436792
ACACA acetyl-CoA carboxylase alpha -0.0431531
PTPRK protein tyrosine phosphatase, receptor type, K -0.0411946
NF1 neurofibromin 1 -0.0396876
STAU1 staufen double-stranded RNA binding protein 1 -0.03952
FNDC3A fibronectin type III domain containing 3A -0.0387347
CCND1 cyclin D1 -0.0382683
ASPH aspartate beta-hydroxylase -0.037124
MAPK8 mitogen-activated protein kinase 8 -0.0367713
ALCAM activated leukocyte cell adhesion molecule -0.0367567
EXOC4 exocyst complex component 4 -0.0364205
S100A9 S100 calcium binding protein A9 -0.0364096
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 -0.0363784
FNDC3B fibronectin type III domain containing 3B -0.0335123
TC2N tandem C2 domains, nuclear -0.0333265
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) -0.0322279
EFNA5 ephrin-A5 -0.032175
UBC ubiquitin C -0.0319365
VMP1 vacuole membrane protein 1 -0.0312047
TMEM123 transmembrane protein 123 -0.0308383
OSMR oncostatin M receptor -0.0305969
DNAH14 dynein, axonemal, heavy chain 14 -0.0304301
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0304298
ITCH itchy E3 ubiquitin protein ligase -0.0304174
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -0.029877
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0296875
SLFN5 schlafen family member 5 -0.0289266
NRIP1 nuclear receptor interacting protein 1 -0.0288024
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0287628
NIPBL Nipped-B homolog (Drosophila) -0.027985
BPTF bromodomain PHD finger transcription factor -0.0279662
STRN3 striatin, calmodulin binding protein 3 -0.0278603
AHNAK AHNAK nucleoprotein -0.0278114
MT2A metallothionein 2A -0.0275655
INTS6 integrator complex subunit 6 -0.0274082
MAP4 microtubule-associated protein 4 -0.0270579
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0269174
GLCCI1 glucocorticoid induced 1 -0.0266866
PARD3 par-3 family cell polarity regulator -0.0266187
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0258782
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0253322
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.025199
JMJD1C jumonji domain containing 1C -0.024739
TPT1 tumor protein, translationally-controlled 1 -0.0247199
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0244107
CANX calnexin -0.02434
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0241109
SMYD3 SET and MYND domain containing 3 -0.0240336
SBF2 SET binding factor 2 -0.0239994
BCAS3 breast carcinoma amplified sequence 3 -0.0238924
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0236588
NCOA7 nuclear receptor coactivator 7 -0.0235247
DLG1 discs, large homolog 1 (Drosophila) -0.0232605
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family) -0.0231888
PDIA3 protein disulfide isomerase family A, member 3 -0.0229472
PATJ PATJ crumbs cell polarity complex component -0.0228863
NAMPT nicotinamide phosphoribosyltransferase -0.0226395
ATF6 activating transcription factor 6 -0.0225607
IL1RAPL2 interleukin 1 receptor accessory protein-like 2 -0.0225594
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0224919
STXBP4 syntaxin binding protein 4 -0.0224851
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0223253
SCFD1 sec1 family domain containing 1 -0.0221904
THSD4 thrombospondin, type I, domain containing 4 -0.0219061
CDK13 cyclin-dependent kinase 13 -0.0218358
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0217961
ARHGAP32 Rho GTPase activating protein 32 -0.0217817
PDE4D phosphodiesterase 4D, cAMP-specific -0.0215241
USP34 ubiquitin specific peptidase 34 -0.0212964
LMAN1 lectin, mannose-binding, 1 -0.0212683
UBE2K ubiquitin-conjugating enzyme E2K -0.0211858
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0211105
NTN4 netrin 4 -0.0210875
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 -0.0210839
S100A8 S100 calcium binding protein A8 -0.0210317
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0209712
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0209568
STK4 serine/threonine kinase 4 -0.0209304
OLA1 Obg-like ATPase 1 -0.0205256
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0205109
RAB7A RAB7A, member RAS oncogene family -0.0204393
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 -0.0203163
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0202811
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0202503
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0202446
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0202301
GPHN gephyrin -0.0202226
MYO6 myosin VI -0.0200421
IER3 immediate early response 3 -0.0199902